AtGenExpress_ATTED_Flowering_median |
This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_ATTED_Fruit_Seeds_median |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_ATTED_Leaf_median |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_ATTED_Root_median |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_ATTED_Seedling_median |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_ATTED_Stem_median |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_ATTED_Whole_Plant_median |
This collection of Gene Expression Properties are associated with whole plant body parts. |
Heptamer_elements | A list of the 7mer sequence motifs from ATTED-II. This table lists each 7mer along with the calculated CEG value and the position from the TSS of the maximum CEG value. |
value
#LINK | |||||||||||||
#lang | en | ||||||||||||
#attribution_name | GenoCon | ||||||||||||
#attribution_url | http://promotercad.org | ||||||||||||
#license | http://creativecommons.org/licenses/by/3.0/deed.ja | ||||||||||||
#file_name | AtGenExpress_ATTED_Fruit_Seeds_median | ||||||||||||
#download_from | http://linkdata.org/work/rdf1s584i | ||||||||||||
#namespace | ATTED | http://atted.jp/data/locus/ | |||||||||||
#namespace | HeptamerElement | http://linkdata.org/work/rdf1s328i/Heptamer_elements.html# | |||||||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | |||||||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | |||||||||||
#property | motif | motif sequence | motif position | CEG | Origin of baseline sequence | label:Col-0_sil3 | label:Col-0_sil4 | label:Col-0_sil5 | label:Col-0_seed6 | label:Col-0_seed7 | label:Col-0_seed8 | label:Col-0_seed9 | label:Col-0_seed10 |
#object_type_xsd | string | string | string | string | string | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
ATTED:At1g01030.html | - | - | - | - | TAIR9 | -0.6079 | -0.8453 | -0.6802 | -0.4588 | -0.5024 | -0.5940 | -0.2260 | -0.1563 |
ATTED:At1g01050.html | HeptamerElement:ATATAAA | ATATAAA | 65 | 0.08 | PPDB | 0.3775 | -0.1404 | -0.2043 | -0.1973 | -0.2915 | -1.0883 | -1.0336 | -1.3381 |
ATTED:At1g01060.html | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | ACGTGTC | CACGTGT | CCACGTG | 168 | 169 | 170 | 0.09 | 0.10 | 0.07 | PPDB | 0.1904 | -0.9559 | -1.1869 | 0.8397 | 0.6380 | -0.0356 | 0.6261 | -0.1885 |
ATTED:At1g01070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT | ATAAATA | TATAAAT | AAAATAT | AAAATAT | 113 | 114 | 183 | 524 | 0.08 | 0.10 | 0.07 | 0.07 | PPDB | -0.2894 | -0.9726 | 0.6279 | 1.5077 | 2.1773 | 1.2868 | 1.3669 | 1.2065 |
ATTED:At1g01080.html | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | ATGGGCC | AATGGGC | 287 | 288 | 0.08 | 0.09 | PPDB | 0.5845 | -0.6192 | -0.7352 | -1.1442 | -1.6802 | -2.6401 | -3.0621 | -2.8878 |
ATTED:At1g01090.html | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAA | ATATATA | TATATAT | ATATATA | 43 | 44 | 45 | 46 | 0.11 | 0.10 | 0.10 | 0.10 | PPDB | -0.1680 | 1.0779 | 1.4109 | 1.4926 | 1.1889 | 0.0211 | -0.6828 | -1.1754 |
ATTED:At1g01100.html | HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA | TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA | 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 | PPDB | 0.3057 | 0.1433 | 0.2166 | 0.4404 | 0.3742 | -0.0615 | -0.2605 | -0.2949 |
ATTED:At1g01110.html | - | - | - | - | PPDB | -0.3335 | -0.8062 | -0.6954 | -0.3573 | -0.5354 | -0.4909 | -0.4411 | -0.3485 |
ATTED:At1g01130.html | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT | AAGCCCA | AAAGCCC | GCCCAAT | 36 | 37 | 86 | 0.07 | 0.06 | 0.07 | PPDB | 0.2071 | 0.0587 | 0.1605 | 0.4950 | 0.1015 | -0.3451 | -0.5109 | -0.3524 |
ATTED:At1g01140.html | HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA | ACGTGGC | ACGCGGA | 78 | 113 | 0.07 | 0.07 | PPDB | 2.3017 | 2.0615 | 2.2302 | 1.1984 | 0.5511 | -2.4381 | -3.5326 | -3.5711 |
ATTED:At1g01150.html | HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | AAACCCT | AAACCCT | TAAACCC | 382 | 407 | 408 | 0.14 | 0.14 | 0.10 | TAIR9 | -0.1773 | -0.0844 | -0.1349 | 0.0165 | 0.0614 | -0.0704 | 0.2373 | 0.2729 |
ATTED:At1g01160.html | HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT | GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT | 166 | 193 | 194 | 212 | 0.07 | 0.07 | 0.07 | 0.06 | PPDB | 0.0237 | -0.0003 | 0.0224 | 0.4205 | 0.5350 | 0.6893 | 0.7922 | 0.7815 |
ATTED:At1g01170.html | HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT | GATAAGA | AGATAAG | TTATCCA | GCCCATT | 18 | 19 | 38 | 64 | 0.06 | 0.06 | 0.09 | 0.10 | PPDB | 0.4834 | -0.2979 | 0.0319 | 0.2281 | 0.4708 | 2.0614 | 2.2304 | 2.2197 |
ATTED:At1g01200.html | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | ATATAAA | ATATAAA | ATATAAA | 38 | 298 | 322 | 0.08 | 0.08 | 0.08 | TAIR9 | 0.1094 | -0.6232 | -0.7394 | -0.3135 | -0.4565 | -0.1488 | 0.1617 | 0.0949 |
ATTED:At1g01220.html | HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | CTCCAGA | TGACTTT | TTGACTT | TTTGACT | 43 | 108 | 109 | 110 | 0.06 | 0.06 | 0.07 | 0.07 | TAIR9 | -0.3601 | -0.4747 | -0.5529 | -1.1189 | -1.4895 | -2.0981 | -2.0196 | -2.3057 |
ATTED:At1g01225.html | HeptamerElement:TCTCTAG | TCTCTAG | 95 | 0.06 | TAIR9 | 0.1411 | 1.0336 | 1.8454 | 2.7835 | 2.8452 | 1.8367 | 1.2447 | 1.1104 |
ATTED:At1g01230.html | HeptamerElement:AAATATC | AAATATC | 43 | 0.13 | PPDB | 0.1632 | 0.3220 | 0.3913 | 0.9757 | 1.1760 | 1.3178 | 1.6045 | 1.5644 |
ATTED:At1g01240.html | HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG | CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG | 117 | 132 | 133 | 477 | 478 | 518 | 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 | PPDB | 0.2398 | 0.5217 | 0.8601 | 1.4198 | 1.8357 | 2.5543 | 2.5484 | 2.5199 |
ATTED:At1g01280.html | HeptamerElement:TATATAT | TATATAT | 39 | 0.10 | TAIR9 | -0.3752 | -0.3898 | -0.3185 | -0.4336 | -0.1947 | -0.1013 | -0.1079 | -0.0929 |
ATTED:At1g01290.html | HeptamerElement:AACCCTA | AACCCTA | 32 | 0.13 | TAIR9 | -0.0377 | -0.2842 | -0.0050 | -0.0749 | -0.4719 | -0.1175 | -0.6953 | -0.7244 |
ATTED:At1g01300.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA | GATATTT | AGATATT | TTATCCA | 128 | 129 | 177 | 0.10 | 0.10 | 0.06 | PPDB | 0.6516 | -0.9042 | -0.4847 | 0.8391 | 0.7026 | 0.3001 | 0.0257 | -0.1064 |
ATTED:At1g01310.html | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA | TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA | 52 | 53 | 54 | 60 | 61 | 0.06 | 0.07 | 0.06 | 0.06 | 0.07 | TAIR9 | 2.9040 | -0.1003 | -0.1529 | -0.3688 | -0.3994 | -0.2278 | -0.3159 | -0.1709 |
ATTED:At1g01320.html | - | - | - | - | PPDB | -0.5275 | -0.3119 | -0.5313 | -1.3813 | -1.8180 | -2.2487 | -2.5046 | -2.5284 |
ATTED:At1g01430.html | HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT | CATGCAA | CCGACAT | AATATCT | 150 | 191 | 223 | 0.08 | 0.06 | 0.07 | PPDB | 0.6882 | 0.5441 | 0.6659 | 0.0307 | -0.6304 | -1.4086 | -1.6499 | -1.9283 |
ATTED:At1g01440.html | - | - | - | - | PPDB | -0.4839 | -0.2857 | -0.0112 | -0.7320 | -0.9174 | -0.5198 | -0.6371 | -0.7947 |
ATTED:At1g01470.html | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC | AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC | 115 | 116 | 152 | 153 | 233 | 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | PPDB | 1.1780 | 1.8545 | 2.2076 | 1.5626 | 2.2754 | 2.9028 | 3.0769 | 3.1097 |
ATTED:At1g01480.html | HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA | TATATAA | ATATAAA | TATATAA | CTATATA | 27 | 331 | 332 | 333 | 0.10 | 0.08 | 0.10 | 0.13 | PPDB | 1.0789 | -0.0585 | -0.2138 | 0.0642 | 2.4103 | 3.8093 | 4.0046 | 3.8985 |
ATTED:At1g01490.html | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.6078 | -0.7364 | -0.0804 | 0.6379 | 0.7196 | 0.8529 | 0.9370 | 0.5106 |
ATTED:At1g01500.html | HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG | AAACCCT | AATATCT | AAATATC | ACACGTG | 5 | 13 | 14 | 136 | 0.14 | 0.11 | 0.11 | 0.08 | PPDB | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
ATTED:At1g01510.html | HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC | TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC | 12 | 44 | 45 | 46 | 111 | 0.07 | 0.08 | 0.10 | 0.13 | 0.09 | PPDB | 0.0459 | 0.0806 | 0.1811 | 0.4876 | 0.2783 | -1.0002 | -1.4707 | -1.6066 |
ATTED:At1g01520.html | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | CACGTGT | ACACGTG | 64 | 65 | 0.08 | 0.08 | TAIR9 | -0.2404 | -0.1054 | -0.3204 | -0.1453 | -0.1318 | -0.2003 | 0.1173 | 0.0441 |
ATTED:At1g01540.html | HeptamerElement:CATGCAA | HeptamerElement:CCACACA | CATGCAA | CCACACA | 38 | 43 | 0.08 | 0.07 | PPDB | -0.2509 | -0.2150 | 0.0657 | -0.1443 | -0.2623 | -0.5544 | -0.6266 | -0.8404 |
ATTED:At1g01550.html | HeptamerElement:CGTCACA | CGTCACA | 107 | 0.06 | PPDB | -0.2049 | 0.1717 | 0.1866 | 0.0285 | 0.2408 | 0.5395 | 0.5652 | 0.6398 |
ATTED:At1g01560.html | - | - | - | - | PPDB | -0.4210 | -1.5420 | -1.3215 | -1.4510 | -1.2822 | -0.3425 | -0.0616 | 0.3348 |
ATTED:At1g01600.html | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA | 27 | 28 | 29 | 524 | 525 | 526 | 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 | PPDB | 1.3506 | -0.8494 | -1.0435 | -0.9232 | -0.5398 | -0.7666 | -1.0691 | -1.1912 |
ATTED:At1g01610.html | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC | CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC | 24 | 34 | 52 | 71 | 72 | 0.06 | 0.06 | 0.06 | 0.09 | 0.06 | PPDB | 1.1568 | -0.2677 | -0.7093 | 1.1522 | 1.6325 | 0.0590 | -0.5487 | -0.9936 |
ATTED:At1g01620.html | HeptamerElement:TTATCCA | TTATCCA | 135 | 0.09 | PPDB | 0.6036 | -0.3655 | 0.1235 | -0.0821 | -0.8338 | -2.7705 | -3.7544 | -4.7185 |
ATTED:At1g01630.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | 83 | 84 | 85 | 86 | 103 | 0.07 | 0.07 | 0.10 | 0.08 | 0.07 | PPDB | -0.5116 | -0.4722 | -0.5106 | -1.0390 | -1.4040 | -1.9550 | -2.4695 | -2.8892 |
ATTED:At1g01650.html | - | - | - | - | PPDB | 0.4619 | -0.1777 | -0.2491 | 0.0297 | 0.3986 | 1.3488 | 1.7111 | 1.7994 |
ATTED:At1g01670.html | HeptamerElement:ACGTGTC | ACGTGTC | 64 | 0.10 | PPDB | 0.4814 | 0.1237 | -0.1016 | -0.1341 | -0.1494 | -0.2395 | -0.0185 | -0.0707 |
ATTED:At1g01710.html | HeptamerElement:ACACGTG | ACACGTG | 93 | 0.09 | PPDB | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
ATTED:At1g01720.html | HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC | 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 | 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 | PPDB | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
ATTED:At1g01730.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC | 96 | 97 | 98 | 99 | 110 | 0.07 | 0.08 | 0.11 | 0.08 | 0.08 | PPDB | -0.1177 | 0.2200 | 0.2334 | 0.0615 | -0.0180 | 0.4135 | 0.9026 | 1.0301 |
ATTED:At1g01740.html | - | - | - | - | TAIR9 | -0.2560 | -0.4609 | -0.4106 | -0.3600 | -0.5684 | -0.7261 | -0.6125 | -0.2983 |
ATTED:At1g01770.html | HeptamerElement:ATATATA | HeptamerElement:TATATAT | ATATATA | TATATAT | 57 | 58 | 0.09 | 0.09 | PPDB | -0.1862 | -0.2205 | -0.2776 | -0.1083 | -0.0525 | 0.9955 | 0.7447 | 1.0679 |
ATTED:At1g01790.html | - | - | - | - | PPDB | -0.2168 | -0.2545 | -0.7445 | -1.7098 | -1.9945 | -3.1045 | -2.8747 | -3.1095 |
ATTED:At1g01820.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 33 | 34 | 0.09 | 0.09 | PPDB | -0.7267 | -0.4710 | -0.3078 | -0.2376 | -0.1380 | 0.4033 | 0.5300 | 0.7393 |
ATTED:At1g01840.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 | 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | 0.2679 | 0.2430 | 0.1139 | 0.0431 | -0.0144 | 0.7595 | 0.6446 | 0.9820 |
ATTED:At1g01860.html | - | - | - | - | PPDB | -0.3130 | -0.3068 | -0.3407 | -0.2409 | -0.3676 | -0.4459 | -0.4287 | -0.3353 |
ATTED:At1g01900.html | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | 46 | 47 | 48 | 49 | 113 | 236 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | PPDB | 0.5941 | 3.4938 | 4.0391 | 3.5322 | 3.2770 | 0.8424 | 0.3872 | -0.4733 |
ATTED:At1g01920.html | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC | 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 | 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 | PPDB | -0.0888 | -0.5692 | -0.9813 | -0.5459 | -0.5724 | -0.3714 | -0.0550 | -0.1417 |
ATTED:At1g01930.html | HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT | ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT | 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 | 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 | PPDB | -0.1268 | -0.1020 | -0.2253 | -0.4765 | -0.4008 | 0.1875 | -0.0443 | 0.1519 |
ATTED:At1g01940.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT | 111 | 112 | 113 | 114 | 122 | 123 | 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 | PPDB | -0.0980 | 0.1020 | 0.0106 | -0.2501 | -0.0309 | -0.5820 | -0.6676 | -0.8500 |
ATTED:At1g01950.html | HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT | AAAATAT | CTCTCTT | 20 | 169 | 0.07 | 0.06 | PPDB | -0.4853 | 0.1048 | 0.2333 | 0.1593 | 0.1115 | -0.3481 | -0.6064 | -0.7691 |
ATTED:At1g01970.html | HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC | 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 | 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 | PPDB | 0.3179 | 0.3062 | 0.1271 | -0.0238 | 0.1118 | 0.9885 | 1.1687 | 1.0020 |
ATTED:At1g01990.html | HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT | 37 | 61 | 62 | 63 | 74 | 123 | 124 | 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 | PPDB | -0.1376 | 0.1657 | 0.2443 | 0.4353 | 0.4891 | 0.9965 | 1.1366 | 1.2344 |
ATTED:At1g02020.html | HeptamerElement:TGCCGAC | TGCCGAC | 118 | 0.08 | PPDB | -0.1669 | 0.3192 | 0.4381 | 0.4786 | 0.3715 | 0.6159 | 0.9456 | 0.9031 |
ATTED:At1g02050.html | - | - | - | - | TAIR9 | -0.7676 | -0.7270 | -0.4544 | -0.4327 | -0.6158 | 0.1356 | 0.3633 | 0.3190 |
ATTED:At1g02060.html | HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT | AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT | 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 | 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 | PPDB | -0.6669 | -0.3315 | -0.2469 | -0.2580 | 0.0014 | -0.2377 | 0.0018 | -0.0320 |
ATTED:At1g02070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 | 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | TAIR9 | -0.3057 | -0.5101 | -0.7964 | -0.5734 | -0.4313 | -0.3546 | -0.4219 | -0.3678 |
ATTED:At1g02080.html | HeptamerElement:AACCCTA | AACCCTA | 436 | 0.10 | PPDB | -0.3043 | 0.0877 | -0.0837 | -0.0267 | 0.0179 | 0.2238 | 0.2557 | 0.2677 |
ATTED:At1g02090.html | HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA | ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA | 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 | 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.1701 | 0.1338 | -0.0108 | -0.0385 | -0.0680 | -0.0197 | 0.1359 | 0.1884 |
ATTED:At1g02100.html | HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG | 138 | 139 | 158 | 159 | 160 | 0.07 | 0.08 | 0.10 | 0.10 | 0.08 | PPDB | -0.6297 | -0.6209 | -0.6618 | -0.6858 | -0.6627 | -0.3780 | -0.4629 | -0.4145 |
ATTED:At1g02120.html | HeptamerElement:GGCCCAA | GGCCCAA | 176 | 0.07 | TAIR9 | -0.1335 | -0.1593 | -0.5229 | -0.8111 | -0.5293 | -0.2462 | -0.1084 | -0.1693 |
ATTED:At1g02130.html | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC | 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 | PPDB | 0.0164 | 0.0318 | 0.1038 | -0.1081 | -0.3004 | -0.4425 | -0.3556 | -0.4011 |
ATTED:At1g02140.html | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA | CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA | 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 | 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 | PPDB | -0.0673 | -0.0238 | 0.1010 | 0.3650 | 0.4206 | 0.2340 | 0.1386 | 0.3600 |
ATTED:At1g02160.html | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA | GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA | 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 | 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 | PPDB | 0.3900 | -0.0534 | 0.1025 | 0.5777 | 0.7172 | 1.7586 | 1.3375 | 1.6383 |
ATTED:At1g02180.html | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA | 69 | 70 | 71 | 72 | 88 | 0.07 | 0.07 | 0.09 | 0.06 | 0.07 | PPDB | 0.5719 | -0.0927 | -0.1121 | 0.3584 | 0.0613 | -0.3806 | -0.6102 | -0.4117 |
ATTED:At1g02190.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA | TATATAA | CTATATA | TCTATAT | CTCTATA | 28 | 29 | 30 | 31 | 0.11 | 0.13 | 0.10 | 0.10 | PPDB | 1.9188 | -1.7482 | -1.6382 | -1.7904 | -1.6775 | -1.6403 | -1.8014 | -1.4128 |
ATTED:At1g02205.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA | TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA | 34 | 35 | 46 | 47 | 70 | 0.11 | 0.13 | 0.07 | 0.08 | 0.06 | PPDB | 2.4222 | 1.1800 | 0.1697 | -3.7306 | -3.6095 | -3.2043 | -3.0405 | -2.7867 |
ATTED:At1g02260.html | HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC | CGTGGCA | ACGTGGC | 46 | 47 | 0.08 | 0.09 | PPDB | 0.1449 | -0.3898 | -0.4279 | 0.0027 | 0.0688 | -0.2164 | -0.5763 | -0.3812 |
ATTED:At1g02270.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 126 | 127 | 0.09 | 0.09 | PPDB | -0.3796 | 0.3338 | 0.3130 | -0.3355 | 0.2045 | -0.0409 | -0.1589 | -0.2324 |
ATTED:At1g02280.html | HeptamerElement:GATAAGG | GATAAGG | 15 | 0.07 | PPDB | 0.4117 | -0.0825 | -0.1226 | -0.0473 | -0.3161 | -0.1466 | -0.1364 | 0.0775 |
ATTED:At1g02310.html | HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA | CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA | 25 | 34 | 35 | 36 | 131 | 541 | 542 | 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 | PPDB | 0.5832 | 0.3560 | 1.3073 | 2.7480 | 3.3001 | 4.2165 | 3.4649 | 3.9001 |
ATTED:At1g02330.html | HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT | GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT | 90 | 105 | 106 | 107 | 179 | 180 | 199 | 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | 0.0354 | -0.0306 | 0.0892 | 0.0526 | 0.2130 | 0.0211 | 0.0721 | -0.2384 |
ATTED:At1g02340.html | HeptamerElement:CCACACA | CCACACA | 114 | 0.06 | PPDB | 1.0990 | 0.2321 | 0.4325 | 0.2234 | 0.6567 | -0.3104 | 0.5940 | 0.0577 |
ATTED:At1g02360.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT | TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT | 30 | 31 | 32 | 52 | 53 | 416 | 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 | PPDB | -1.0378 | -1.1898 | -1.1286 | -0.7678 | -0.5592 | -0.3650 | -0.3452 | -0.2849 |
ATTED:At1g02370.html | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | AACCCTA | AAACCCT | TAAACCC | TTAAACC | 31 | 32 | 33 | 34 | 0.11 | 0.12 | 0.08 | 0.06 | PPDB | -0.3057 | -0.3158 | -0.3860 | -0.0985 | 0.1022 | -0.5475 | -0.4272 | -0.2130 |
ATTED:At1g02390.html | HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC | TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC | 28 | 71 | 122 | 172 | 173 | 180 | 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 | PPDB | 2.0071 | 1.6260 | 2.1131 | 2.6903 | 1.5579 | 1.0703 | 0.4047 | 1.2895 |
ATTED:At1g02400.html | HeptamerElement:AATAATT | HeptamerElement:AATAATT | AATAATT | AATAATT | 236 | 332 | 0.06 | 0.06 | PPDB | -0.6875 | 0.7100 | -0.3259 | -0.7326 | -0.5003 | 0.7868 | 1.6454 | 1.4397 |
ATTED:At1g02410.html | HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT | 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 | 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | PPDB | -0.1388 | -0.0063 | 0.1123 | 0.0426 | -0.0348 | -0.0993 | -0.4020 | -0.3535 |
ATTED:At1g02450.html | HeptamerElement:AAATATC | HeptamerElement:AAATATC | AAATATC | AAATATC | 165 | 187 | 0.07 | 0.07 | PPDB | 1.4672 | -1.4120 | -1.7550 | -1.3790 | -1.3775 | -0.8209 | -0.6902 | -0.9582 |
ATTED:At1g02460.html | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT | ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT | 47 | 48 | 49 | 50 | 68 | 126 | 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 | TAIR9 | 0.0700 | -0.2008 | -0.4673 | 0.0255 | -0.0191 | 0.2290 | 0.4442 | 0.3877 |
ATTED:At1g02470.html | HeptamerElement:AAAGTCA | AAAGTCA | 164 | 0.07 | TAIR9 | 0.0795 | -1.1266 | -0.9605 | -0.4800 | -0.3145 | 0.0367 | 0.4185 | 0.1446 |
ATTED:At1g02475.html | - | - | - | - | PPDB | 0.4844 | 0.2154 | -0.0361 | -1.0246 | -1.0793 | -1.2064 | -1.3572 | -1.1832 |