AtGenExpress_PPDB_Flowering_median | This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_PPDB_Fruit_Seeds_median |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_PPDB_Leaf_median |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_PPDB_Root_median |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_PPDB_Seedling_median |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_PPDB_Stem_median |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_PPDB_Whole_Plant_median |
This collection of Gene Expression Properties are associated with whole plant body parts. |
Octamer_elements | A list of the 8mer sequence motifs from PPDB. This table lists each 8mer along with the appropriate median position from the TSS, calculated from all 8mers. |
We would like to thank Dr. Yoshiharu Yamamoto for supplying the data of PPDB (Plant Promoter Database) for PromoterCAD & GenoCon2 competition.
License of this work's data is according to the intentions of the PPDB original data source.
http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/license.cgi
value
#LINK | |||||||||||||
#lang | en | ||||||||||||
#attribution_name | GenoCon | ||||||||||||
#attribution_url | http://promotercad.org | ||||||||||||
#file_name | AtGenExpress_PPDB_Fruit_Seeds_median | ||||||||||||
#download_from | http://linkdata.org/work/rdf1s705i | ||||||||||||
#namespace | ATTED | http://atted.jp/data/locus/ | |||||||||||
#namespace | Gene | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||||
#namespace | OctamerElement | http://linkdata.org/work/rdf1s329i/Octamer_elements.html# | |||||||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | |||||||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | |||||||||||
#namespace | genome_version | http://www.arabidopsis.org/portals/genAnnotation/gene_structural_annotation/ | |||||||||||
#property | PPDB motif | motif type | motif sequence | motif position | genome_version:annotation_data.jsp | label:Col-0_sil3 | label:Col-0_sil4 | label:Col-0_sil5 | label:Col-0_seed6 | label:Col-0_seed7 | label:Col-0_seed8 | label:Col-0_seed9 | label:Col-0_seed10 |
#object_type_xsd | string | string | string | string | string | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
Gene:AT1G01010 | OctamerElement:AtREG514 | OctamerElement:AtREG519 | REG | TCGGTTTA | CGGTTTAC | 209.5 | 208.5 | TAIR9 | -0.6306 | -0.6864 | -0.6871 | -0.7065 | -0.2947 | -0.1716 | -0.1507 | -0.0480 |
Gene:AT1G01010 | OctamerElement:AtREG473 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | TTAAACCG | TAAACCGG | AAACCGGA | 129.5 | 128.5 | 127.5 | TAIR9 | -0.6306 | -0.6864 | -0.6871 | -0.7065 | -0.2947 | -0.1716 | -0.1507 | -0.0480 |
Gene:AT1G01010 | OctamerElement:AtREG626 | REG | AAACGCTG | 63.5 | TAIR9 | -0.6306 | -0.6864 | -0.6871 | -0.7065 | -0.2947 | -0.1716 | -0.1507 | -0.0480 |
Gene:AT1G01060 | OctamerElement:AtREG623 | REG | ATACCCTT | 130.5 | TAIR9 | 0.1904 | -0.9559 | -1.1869 | 0.8397 | 0.6380 | -0.0356 | 0.6261 | -0.1885 |
Gene:AT1G01060 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG382 | OctamerElement:AtREG544 | REG | ACGTGTCG | CACGTGTC | CCACGTGT | ACCACGTG | 167.5 | 168.5 | 169.5 | 170.5 | TAIR9 | 0.1904 | -0.9559 | -1.1869 | 0.8397 | 0.6380 | -0.0356 | 0.6261 | -0.1885 |
Gene:AT1G01070 | OctamerElement:AtREG462 | REG | GGGCTTAT | 68.5 | TAIR9 | -0.2894 | -0.9726 | 0.6279 | 1.5077 | 2.1773 | 1.2868 | 1.3669 | 1.2065 |
Gene:AT1G01080 | OctamerElement:AtREG375 | OctamerElement:AtREG442 | OctamerElement:AtREG405 | OctamerElement:AtREG390 | OctamerElement:AtREG617 | REG | CCGACCCG | CCCGACCC | ACCCGACC | GACCCGAC | TGACCCGA | 43.5 | 44.5 | 45.5 | 46.5 | 47.5 | TAIR9 | 0.5845 | -0.6192 | -0.7352 | -1.1442 | -1.6802 | -2.6401 | -3.0621 | -2.8878 |
Gene:AT1G01080 | OctamerElement:AtREG459 | OctamerElement:AtREG359 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | REG | GGCCTTTT | GGGCCTTT | TGGGCCTT | TTGGGCCT | TTTGGGCC | 144.5 | 145.5 | 146.5 | 147.5 | 148.5 | TAIR9 | 0.5845 | -0.6192 | -0.7352 | -1.1442 | -1.6802 | -2.6401 | -3.0621 | -2.8878 |
Gene:AT1G01080 | OctamerElement:AtREG437 | OctamerElement:AtREG490 | OctamerElement:AtREG361 | OctamerElement:AtREG643 | REG | TGGGCCAT | ATGGGCCA | AATGGGCC | GAATGGGC | 285.5 | 286.5 | 287.5 | 288.5 | TAIR9 | 0.5845 | -0.6192 | -0.7352 | -1.1442 | -1.6802 | -2.6401 | -3.0621 | -2.8878 |
Gene:AT1G01090 | OctamerElement:AtREG523 | REG | GTGGGTCC | 90.5 | TAIR9 | -0.1680 | 1.0779 | 1.4109 | 1.4926 | 1.1889 | 0.0211 | -0.6828 | -1.1754 |
Gene:AT1G01100 | OctamerElement:AtREG635 | OctamerElement:AtREG403 | OctamerElement:AtREG380 | REG | GCCCATCA | GGCCCATC | CGGCCCAT | 59.5 | 60.5 | 61.5 | TAIR9 | 0.3057 | 0.1433 | 0.2166 | 0.4404 | 0.3742 | -0.0615 | -0.2605 | -0.2949 |
Gene:AT1G01100 | OctamerElement:AtREG475 | OctamerElement:AtREG358 | OctamerElement:AtREG354 | OctamerElement:AtREG361 | OctamerElement:AtREG386 | REG | GGGCCTAG | TGGGCCTA | ATGGGCCT | AATGGGCC | AAATGGGC | 81.5 | 82.5 | 83.5 | 84.5 | 85.5 | TAIR9 | 0.3057 | 0.1433 | 0.2166 | 0.4404 | 0.3742 | -0.0615 | -0.2605 | -0.2949 |
Gene:AT1G01100 | OctamerElement:AtREG355 | OctamerElement:AtREG352 | OctamerElement:AtREG356 | OctamerElement:AtREG353 | REG | GCCCAATA | GGCCCAAT | AGGCCCAA | AAGGCCCA | 120.5 | 121.5 | 122.5 | 123.5 | TAIR9 | 0.3057 | 0.1433 | 0.2166 | 0.4404 | 0.3742 | -0.0615 | -0.2605 | -0.2949 |
Gene:AT1G01100 | OctamerElement:AtREG533 | OctamerElement:AtREG469 | OctamerElement:AtREG421 | REG | TTGGGCTC | TTTGGGCT | ATTTGGGC | 164.5 | 165.5 | 166.5 | TAIR9 | 0.3057 | 0.1433 | 0.2166 | 0.4404 | 0.3742 | -0.0615 | -0.2605 | -0.2949 |
Gene:AT1G01100 | OctamerElement:AtREG632 | REG | AAAGTCAA | 182.5 | TAIR9 | 0.3057 | 0.1433 | 0.2166 | 0.4404 | 0.3742 | -0.0615 | -0.2605 | -0.2949 |
Gene:AT1G01110 | OctamerElement:AtREG599 | REG | GGTGTCGT | 164.5 | TAIR9 | -0.3335 | -0.8062 | -0.6954 | -0.3573 | -0.5354 | -0.4909 | -0.4411 | -0.3485 |
Gene:AT1G01120 | OctamerElement:AtREG620 | REG | CCCATATA | 168.5 | TAIR9 | 1.2546 | 0.9450 | 0.7658 | -0.0981 | 1.0314 | 1.1129 | 1.0324 | 0.7199 |
Gene:AT1G01130 | OctamerElement:AtREG611 | OctamerElement:AtREG417 | OctamerElement:AtREG355 | REG | CCAATAAG | CCCAATAA | GCCCAATA | 83.5 | 84.5 | 85.5 | TAIR9 | 0.2071 | 0.0587 | 0.1605 | 0.4950 | 0.1015 | -0.3451 | -0.5109 | -0.3524 |
Gene:AT1G01140 | OctamerElement:AtREG395 | REG | GCGCGTGA | 52.5 | TAIR9 | 2.3017 | 2.0615 | 2.2302 | 1.1984 | 0.5511 | -2.4381 | -3.5326 | -3.5711 |
Gene:AT1G01140 | OctamerElement:AtREG523 | OctamerElement:AtREG615 | REG | GGACCCAC | GGGACCCA | 65.5 | 66.5 | TAIR9 | 2.3017 | 2.0615 | 2.2302 | 1.1984 | 0.5511 | -2.4381 | -3.5326 | -3.5711 |
Gene:AT1G01140 | OctamerElement:AtREG448 | OctamerElement:AtREG379 | OctamerElement:AtREG413 | REG | CGTGGCAT | ACGTGGCA | TACGTGGC | 76.5 | 77.5 | 78.5 | TAIR9 | 2.3017 | 2.0615 | 2.2302 | 1.1984 | 0.5511 | -2.4381 | -3.5326 | -3.5711 |
Gene:AT1G01160 | OctamerElement:AtREG507 | OctamerElement:AtREG504 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG351 | OctamerElement:AtREG577 | REG | CCATGGGC | CATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTA | GGCCTTAG | 215.5 | 214.5 | 213.5 | 212.5 | 211.5 | 210.5 | TAIR9 | 0.0237 | -0.0003 | 0.0224 | 0.4205 | 0.5350 | 0.6893 | 0.7922 | 0.7815 |
Gene:AT1G01160 | OctamerElement:AtREG563 | OctamerElement:AtREG360 | OctamerElement:AtREG358 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | CTTAGGCC | TTAGGCCC | TAGGCCCA | AGGCCCAA | GGCCCAAA | GCCCAAAT | 196.5 | 195.5 | 194.5 | 193.5 | 192.5 | 191.5 | TAIR9 | 0.0237 | -0.0003 | 0.0224 | 0.4205 | 0.5350 | 0.6893 | 0.7922 | 0.7815 |
Gene:AT1G01160 | OctamerElement:AtREG446 | OctamerElement:AtREG484 | OctamerElement:AtREG420 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | ATTGGCCC | TTGGCCCA | TGGCCCAA | GGCCCAAA | GCCCAAAT | 168.5 | 167.5 | 166.5 | 165.5 | 164.5 | TAIR9 | 0.0237 | -0.0003 | 0.0224 | 0.4205 | 0.5350 | 0.6893 | 0.7922 | 0.7815 |
Gene:AT1G01170 | OctamerElement:AtREG386 | REG | GCCCATTT | 63.5 | TAIR9 | 0.4834 | -0.2979 | 0.0319 | 0.2281 | 0.4708 | 2.0614 | 2.2304 | 2.2197 |
Gene:AT1G01180 | OctamerElement:AtREG470 | OctamerElement:AtREG557 | OctamerElement:AtREG632 | REG | AGACACGT | GACACGTA | AAAGTCAA | 164.5 | 163.5 | 156.5 | TAIR9 | -0.2495 | -0.1244 | -0.1397 | 0.0983 | -0.1046 | 0.1056 | 0.3576 | 0.2649 |
Gene:AT1G01230 | OctamerElement:AtREG424 | REG | GGCCTATT | 101.5 | TAIR9 | 0.1632 | 0.3220 | 0.3913 | 0.9757 | 1.1760 | 1.3178 | 1.6045 | 1.5644 |
Gene:AT1G01240 | OctamerElement:AtREG590 | OctamerElement:AtREG590 | REG | AACACGTG | CACGTGTT | 133.5 | 131.5 | TAIR9 | 0.2398 | 0.5217 | 0.8601 | 1.4198 | 1.8357 | 2.5543 | 2.5484 | 2.5199 |
Gene:AT1G01240 | OctamerElement:AtREG527 | OctamerElement:AtREG569 | OctamerElement:AtREG520 | REG | GTGTCGTT | TGTCGTTT | GTCGTTTT | 72.5 | 71.5 | 70.5 | TAIR9 | 0.2398 | 0.5217 | 0.8601 | 1.4198 | 1.8357 | 2.5543 | 2.5484 | 2.5199 |
Gene:AT1G01260 | OctamerElement:AtREG636 | REG | TAAGGGGT | 171.5 | TAIR9 | -0.4409 | 0.0137 | 0.1128 | 0.4959 | 0.5894 | 0.5449 | 0.4730 | 0.3688 |
Gene:AT1G01260 | OctamerElement:AtREG463 | OctamerElement:AtREG455 | OctamerElement:AtREG412 | OctamerElement:AtREG473 | REG | GACCCGGT | ACCCGGTT | CCGGTTTA | CGGTTTAA | 114.5 | 113.5 | 111.5 | 110.5 | TAIR9 | -0.4409 | 0.0137 | 0.1128 | 0.4959 | 0.5894 | 0.5449 | 0.4730 | 0.3688 |
Gene:AT1G01320 | OctamerElement:AtREG411 | REG | AGAGGCCC | 144.5 | TAIR9 | -0.5275 | -0.3119 | -0.5313 | -1.3813 | -1.8180 | -2.2487 | -2.5046 | -2.5284 |
Gene:AT1G01320 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG358 | OctamerElement:AtREG360 | OctamerElement:AtREG563 | REG | CCCATTAA | GCCCATTA | GGCCCATT | AGGCCCAT | TAGGCCCA | TTAGGCCC | CTTAGGCC | 159.5 | 160.5 | 161.5 | 162.5 | 163.5 | 164.5 | 165.5 | TAIR9 | -0.5275 | -0.3119 | -0.5313 | -1.3813 | -1.8180 | -2.2487 | -2.5046 | -2.5284 |
Gene:AT1G01370 | OctamerElement:AtREG642 | REG | AGGGGTAA | 224.5 | TAIR9 | -0.0871 | -0.0279 | -0.2223 | -0.4976 | -0.6831 | -1.0224 | -0.3850 | -0.9552 |
Gene:AT1G01430 | OctamerElement:AtREG608 | REG | AAGCCACG | 199.5 | TAIR9 | 0.6882 | 0.5441 | 0.6659 | 0.0307 | -0.6304 | -1.4086 | -1.6499 | -1.9283 |
Gene:AT1G01470 | OctamerElement:AtREG638 | REG | GACCGACT | 65.5 | TAIR9 | 1.1780 | 1.8545 | 2.2076 | 1.5626 | 2.2754 | 2.9028 | 3.0769 | 3.1097 |
Gene:AT1G01470 | OctamerElement:AtREG588 | REG | TCACACGT | 108.5 | TAIR9 | 1.1780 | 1.8545 | 2.2076 | 1.5626 | 2.2754 | 2.9028 | 3.0769 | 3.1097 |
Gene:AT1G01470 | OctamerElement:AtREG557 | OctamerElement:AtREG470 | REG | GACACGTA | AGACACGT | 151.5 | 152.5 | TAIR9 | 1.1780 | 1.8545 | 2.2076 | 1.5626 | 2.2754 | 2.9028 | 3.0769 | 3.1097 |
Gene:AT1G01480 | OctamerElement:AtREG591 | REG | CCCATGGG | 74.5 | TAIR9 | 1.0789 | -0.0585 | -0.2138 | 0.0642 | 2.4103 | 3.8093 | 4.0046 | 3.8985 |
Gene:AT1G01490 | OctamerElement:AtREG395 | REG | TCACGCGC | 209.5 | TAIR9 | -0.6078 | -0.7364 | -0.0804 | 0.6379 | 0.7196 | 0.8529 | 0.9370 | 0.5106 |
Gene:AT1G01490 | OctamerElement:AtREG486 | REG | CACGCGCC | 222.5 | TAIR9 | -0.6078 | -0.7364 | -0.0804 | 0.6379 | 0.7196 | 0.8529 | 0.9370 | 0.5106 |
Gene:AT1G01500 | OctamerElement:AtREG426 | OctamerElement:AtREG378 | OctamerElement:AtREG372 | OctamerElement:AtREG386 | OctamerElement:AtREG443 | OctamerElement:AtREG610 | REG | TAAGCCCA | AAGCCCAT | AGCCCATT | GCCCATTT | CCCATTTA | TTTAACGG | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | 213.5 | TAIR9 | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
Gene:AT1G01500 | OctamerElement:AtREG437 | OctamerElement:AtREG458 | OctamerElement:AtREG384 | REG | ATGGCCCA | TGGCCCAG | GGCCCAGT | 191.5 | 190.5 | 189.5 | TAIR9 | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
Gene:AT1G01500 | OctamerElement:AtREG589 | REG | AAAAAGCC | 156.5 | TAIR9 | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
Gene:AT1G01500 | OctamerElement:AtREG588 | OctamerElement:AtREG460 | OctamerElement:AtREG541 | REG | TCACACGT | CACACGTG | CACGTGCG | 137.5 | 136.5 | 134.5 | TAIR9 | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
Gene:AT1G01500 | OctamerElement:AtREG567 | OctamerElement:AtREG602 | REG | AGGGTATT | GGGTATTT | 110.5 | 109.5 | TAIR9 | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
Gene:AT1G01500 | OctamerElement:AtREG592 | REG | TTTGACCC | 80.5 | TAIR9 | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
Gene:AT1G01500 | OctamerElement:AtREG646 | REG | CGTAATTA | 69.5 | TAIR9 | -0.0928 | 0.4002 | 0.5011 | 0.2052 | 0.3979 | 0.0505 | 0.6242 | 0.5063 |
Gene:AT1G01510 | OctamerElement:AtREG540 | OctamerElement:AtREG537 | OctamerElement:AtREG439 | OctamerElement:AtREG415 | OctamerElement:AtREG565 | REG | ACGGCGTC | GGCGTCGT | GCGTCGTT | CGTCGTTT | GTCGTTTA | 208.5 | 206.5 | 205.5 | 204.5 | 203.5 | TAIR9 | 0.0459 | 0.0806 | 0.1811 | 0.4876 | 0.2783 | -1.0002 | -1.4707 | -1.6066 |
Gene:AT1G01510 | OctamerElement:AtREG578 | REG | GATGACGT | 179.5 | TAIR9 | 0.0459 | 0.0806 | 0.1811 | 0.4876 | 0.2783 | -1.0002 | -1.4707 | -1.6066 |
Gene:AT1G01510 | OctamerElement:AtREG529 | OctamerElement:AtREG373 | OctamerElement:AtREG392 | OctamerElement:AtREG400 | REG | TTTTGGGC | TTTGGGCC | TTGGGCCC | TGGGCCCT | 112.5 | 111.5 | 110.5 | 109.5 | TAIR9 | 0.0459 | 0.0806 | 0.1811 | 0.4876 | 0.2783 | -1.0002 | -1.4707 | -1.6066 |
Gene:AT1G01540 | OctamerElement:AtREG630 | REG | CGACATCG | 155.5 | TAIR9 | -0.2509 | -0.2150 | 0.0657 | -0.1443 | -0.2623 | -0.5544 | -0.6266 | -0.8404 |
Gene:AT1G01550 | OctamerElement:AtREG632 | REG | TTGACTTT | 194.5 | TAIR9 | -0.2049 | 0.1717 | 0.1866 | 0.0285 | 0.2408 | 0.5395 | 0.5652 | 0.6398 |
Gene:AT1G01560 | OctamerElement:AtREG507 | REG | CCATGGGC | 203.5 | TAIR9 | -0.4210 | -1.5420 | -1.3215 | -1.4510 | -1.2822 | -0.3425 | -0.0616 | 0.3348 |
Gene:AT1G01620 | OctamerElement:AtREG553 | OctamerElement:AtREG554 | REG | CAACGGTC | TCCAACGG | 444.5 | 446.5 | TAIR9 | 0.6036 | -0.3655 | 0.1235 | -0.0821 | -0.8338 | -2.7705 | -3.7544 | -4.7185 |
Gene:AT1G01620 | OctamerElement:AtREG475 | REG | CTAGGCCC | 525.5 | TAIR9 | 0.6036 | -0.3655 | 0.1235 | -0.0821 | -0.8338 | -2.7705 | -3.7544 | -4.7185 |
Gene:AT1G01630 | OctamerElement:AtREG440 | OctamerElement:AtREG419 | OctamerElement:AtREG485 | REG | CTGACGTG | TGACGTGG | TGGGCTCA | 208.5 | 207.5 | 202.5 | TAIR9 | -0.5116 | -0.4722 | -0.5106 | -1.0390 | -1.4040 | -1.9550 | -2.4695 | -2.8892 |
Gene:AT1G01630 | OctamerElement:AtREG531 | REG | AAAACGGC | 187.5 | TAIR9 | -0.5116 | -0.4722 | -0.5106 | -1.0390 | -1.4040 | -1.9550 | -2.4695 | -2.8892 |
Gene:AT1G01630 | OctamerElement:AtREG533 | OctamerElement:AtREG402 | OctamerElement:AtREG355 | OctamerElement:AtREG624 | REG | GAGCCCAA | AGCCCAAT | GCCCAATA | CCCAATAG | 104.5 | 103.5 | 102.5 | 101.5 | TAIR9 | -0.5116 | -0.4722 | -0.5106 | -1.0390 | -1.4040 | -1.9550 | -2.4695 | -2.8892 |
Gene:AT1G01630 | OctamerElement:AtREG425 | OctamerElement:AtREG351 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG352 | OctamerElement:AtREG355 | REG | ATAAGGCC | TAAGGCCC | AAGGCCCA | AGGCCCAA | GGCCCAAT | GCCCAATA | 87.5 | 86.5 | 85.5 | 84.5 | 83.5 | 82.5 | TAIR9 | -0.5116 | -0.4722 | -0.5106 | -1.0390 | -1.4040 | -1.9550 | -2.4695 | -2.8892 |
Gene:AT1G01650 | OctamerElement:AtREG564 | OctamerElement:AtREG626 | REG | GCGTTTTA | CAGCGTTT | 1082.5 | 1084.5 | TAIR9 | 0.4619 | -0.1777 | -0.2491 | 0.0297 | 0.3986 | 1.3488 | 1.7111 | 1.7994 |
Gene:AT1G01650 | OctamerElement:AtREG632 | REG | AAAGTCAA | 1095.5 | TAIR9 | 0.4619 | -0.1777 | -0.2491 | 0.0297 | 0.3986 | 1.3488 | 1.7111 | 1.7994 |
Gene:AT1G01650 | OctamerElement:AtREG486 | REG | CACGCGCC | 1129.5 | TAIR9 | 0.4619 | -0.1777 | -0.2491 | 0.0297 | 0.3986 | 1.3488 | 1.7111 | 1.7994 |
Gene:AT1G01650 | OctamerElement:AtREG536 | REG | ACACGCGT | 1139.5 | TAIR9 | 0.4619 | -0.1777 | -0.2491 | 0.0297 | 0.3986 | 1.3488 | 1.7111 | 1.7994 |
Gene:AT1G01650 | OctamerElement:AtREG449 | OctamerElement:AtREG420 | OctamerElement:AtREG484 | REG | GGCCCAAC | TGGCCCAA | TTGGCCCA | 182.5 | 183.5 | 184.5 | TAIR9 | 0.4619 | -0.1777 | -0.2491 | 0.0297 | 0.3986 | 1.3488 | 1.7111 | 1.7994 |
Gene:AT1G01670 | OctamerElement:AtREG428 | OctamerElement:AtREG478 | OctamerElement:AtREG481 | OctamerElement:AtREG517 | OctamerElement:AtREG466 | OctamerElement:AtREG489 | REG | CGTGTCGT | ACGTGTCG | GACGTGTC | TGACGTGT | GTGACGTG | CGTGACGT | 62.5 | 63.5 | 64.5 | 65.5 | 66.5 | 67.5 | TAIR9 | 0.4814 | 0.1237 | -0.1016 | -0.1341 | -0.1494 | -0.2395 | -0.0185 | -0.0707 |
Gene:AT1G01690 | OctamerElement:AtREG417 | REG | TTATTGGG | 188.5 | TAIR9 | -0.2613 | -0.3358 | -0.3365 | -0.0383 | 0.1779 | 0.6358 | 0.9229 | 0.9747 |
Gene:AT1G01690 | OctamerElement:AtREG364 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | TATGGGCC | ATGGGCCA | TGGGCCAT | 169.5 | 168.5 | 167.5 | TAIR9 | -0.2613 | -0.3358 | -0.3365 | -0.0383 | 0.1779 | 0.6358 | 0.9229 | 0.9747 |
Gene:AT1G01690 | OctamerElement:AtREG558 | OctamerElement:AtREG357 | OctamerElement:AtREG372 | OctamerElement:AtREG378 | OctamerElement:AtREG376 | OctamerElement:AtREG365 | OctamerElement:AtREG601 | OctamerElement:AtREG394 | OctamerElement:AtREG364 | OctamerElement:AtREG354 | OctamerElement:AtREG447 | OctamerElement:AtREG411 | REG | CTAATGGG | TAATGGGC | AATGGGCT | ATGGGCTT | TGGGCTTT | GGGCTTTA | GGCTTTAT | TTATGGGC | TATGGGCC | ATGGGCCT | TGGGCCTC | GGGCCTCT | 149.5 | 148.5 | 147.5 | 146.5 | 145.5 | 144.5 | 143.5 | 139.5 | 138.5 | 137.5 | 136.5 | 135.5 | TAIR9 | -0.2613 | -0.3358 | -0.3365 | -0.0383 | 0.1779 | 0.6358 | 0.9229 | 0.9747 |
Gene:AT1G01710 | OctamerElement:AtREG504 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | CATGGGCC | ATGGGCCA | TGGGCCAT | 277.5 | 276.5 | 275.5 | TAIR9 | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
Gene:AT1G01710 | OctamerElement:AtREG416 | OctamerElement:AtREG416 | OctamerElement:AtREG545 | REG | TTAAGGCC | GGCCTTAA | TTAAAGCC | 239.5 | 235.5 | 231.5 | TAIR9 | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
Gene:AT1G01710 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG398 | REG | TTAATGGG | TAATGGGC | AATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTG | 222.5 | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | TAIR9 | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
Gene:AT1G01710 | OctamerElement:AtREG590 | OctamerElement:AtREG628 | REG | AACACGTG | ACACGTGA | 93.5 | 92.5 | TAIR9 | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
Gene:AT1G01710 | OctamerElement:AtREG575 | REG | CGAACCGA | 71.5 | TAIR9 | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
Gene:AT1G01710 | OctamerElement:AtREG513 | REG | GTCCACGT | 63.5 | TAIR9 | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
Gene:AT1G01710 | OctamerElement:AtREG598 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | ATAAACCG | TAAACCGG | AAACCGGA | 47.5 | 46.5 | 45.5 | TAIR9 | 0.1011 | 0.0653 | -0.1552 | -0.4452 | -0.3728 | 0.5332 | 0.7650 | 0.7045 |
Gene:AT1G01720 | OctamerElement:AtREG644 | REG | ACCGGAAA | 280.5 | TAIR9 | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
Gene:AT1G01720 | OctamerElement:AtREG451 | REG | GGTTCGGT | 242.5 | TAIR9 | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
Gene:AT1G01720 | OctamerElement:AtREG576 | OctamerElement:AtREG569 | REG | GAAACGAC | AAACGACA | 183.5 | 182.5 | TAIR9 | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
Gene:AT1G01720 | OctamerElement:AtREG471 | OctamerElement:AtREG371 | OctamerElement:AtREG388 | OctamerElement:AtREG419 | OctamerElement:AtREG440 | OctamerElement:AtREG515 | REG | TCGCCACG | CGCCACGT | GCCACGTC | CCACGTCA | CACGTCAG | ACGTCAGC | 146.5 | 145.5 | 144.5 | 143.5 | 142.5 | 141.5 | TAIR9 | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
Gene:AT1G01720 | OctamerElement:AtREG472 | REG | ACGTGTCC | 113.5 | TAIR9 | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
Gene:AT1G01720 | OctamerElement:AtREG464 | OctamerElement:AtREG382 | OctamerElement:AtREG460 | REG | CCCACGTG | CCACGTGT | CACGTGTG | 90.5 | 89.5 | 88.5 | TAIR9 | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
Gene:AT1G01720 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG366 | OctamerElement:AtREG472 | REG | CGACACGT | GACACGTG | CACGTGTC | ACGTGTCC | 50.5 | 49.5 | 47.5 | 46.5 | TAIR9 | -0.1579 | 0.1240 | -0.3497 | 0.6526 | 1.8720 | 2.9858 | 3.4926 | 3.4171 |
Gene:AT1G01730 | OctamerElement:AtREG520 | OctamerElement:AtREG569 | OctamerElement:AtREG527 | REG | GTCGTTTT | AAACGACA | AACGACAC | 169.5 | 168.5 | 167.5 | TAIR9 | -0.1177 | 0.2200 | 0.2334 | 0.0615 | -0.0180 | 0.4135 | 0.9026 | 1.0301 |