AtGenExpress_PPDB_Flowering_median | This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_PPDB_Fruit_Seeds_median |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_PPDB_Leaf_median |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_PPDB_Root_median |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_PPDB_Seedling_median |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_PPDB_Stem_median |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_PPDB_Whole_Plant_median |
This collection of Gene Expression Properties are associated with whole plant body parts. |
Octamer_elements | A list of the 8mer sequence motifs from PPDB. This table lists each 8mer along with the appropriate median position from the TSS, calculated from all 8mers. |
We would like to thank Dr. Yoshiharu Yamamoto for supplying the data of PPDB (Plant Promoter Database) for PromoterCAD & GenoCon2 competition.
License of this work's data is according to the intentions of the PPDB original data source.
http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/license.cgi
value
#LINK | |||||||||||||||||
#lang | en | ||||||||||||||||
#attribution_name | GenoCon | ||||||||||||||||
#attribution_url | http://promotercad.org | ||||||||||||||||
#file_name | AtGenExpress_PPDB_Seedling_median | ||||||||||||||||
#download_from | http://linkdata.org/work/rdf1s705i | ||||||||||||||||
#namespace | ATTED | http://atted.jp/data/locus/ | |||||||||||||||
#namespace | Gene | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||||||||
#namespace | OctamerElement | http://linkdata.org/work/rdf1s329i/Octamer_elements.html# | |||||||||||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | |||||||||||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | |||||||||||||||
#namespace | genome_version | http://www.arabidopsis.org/portals/genAnnotation/gene_structural_annotation/ | |||||||||||||||
#property | PPDB motif | motif type | motif sequence | motif position | genome_version:annotation_data.jsp | label:Col-0_cotyl | label:Col-0_hyp | label:Col-0_root7 | label:Col-0_veg_leaf | label:Col-0_leaf_1-2 | label:Col-0_shoot_veg | label:Col-0_seedl_green | label:Col-0_roset7 | label:Col-0_seedl_GM | label:Col-0_seedl_GM5 | label:Col-0_sedlGM-21 | label:Col-0_sedlGM5-21 |
#object_type_xsd | string | string | string | string | string | string | string | string | string | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
Gene:AT1G01010 | OctamerElement:AtREG514 | OctamerElement:AtREG519 | REG | TCGGTTTA | CGGTTTAC | 209.5 | 208.5 | TAIR9 | 0.0389 | -0.0027 | 0.6140 | -0.8025 | -0.7171 | -0.4621 | -0.2630 | -0.3816 | -0.0636 | -0.0773 | -0.4257 | -0.2045 |
Gene:AT1G01010 | OctamerElement:AtREG473 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | TTAAACCG | TAAACCGG | AAACCGGA | 129.5 | 128.5 | 127.5 | TAIR9 | 0.0389 | -0.0027 | 0.6140 | -0.8025 | -0.7171 | -0.4621 | -0.2630 | -0.3816 | -0.0636 | -0.0773 | -0.4257 | -0.2045 |
Gene:AT1G01010 | OctamerElement:AtREG626 | REG | AAACGCTG | 63.5 | TAIR9 | 0.0389 | -0.0027 | 0.6140 | -0.8025 | -0.7171 | -0.4621 | -0.2630 | -0.3816 | -0.0636 | -0.0773 | -0.4257 | -0.2045 |
Gene:AT1G01060 | OctamerElement:AtREG623 | REG | ATACCCTT | 130.5 | TAIR9 | 0.7063 | 0.5057 | -1.7062 | 0.3027 | 0.4185 | -0.0295 | 0.5165 | -1.3520 | 0.3868 | 0.1913 | -0.4212 | -0.1084 |
Gene:AT1G01060 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG382 | OctamerElement:AtREG544 | REG | ACGTGTCG | CACGTGTC | CCACGTGT | ACCACGTG | 167.5 | 168.5 | 169.5 | 170.5 | TAIR9 | 0.7063 | 0.5057 | -1.7062 | 0.3027 | 0.4185 | -0.0295 | 0.5165 | -1.3520 | 0.3868 | 0.1913 | -0.4212 | -0.1084 |
Gene:AT1G01070 | OctamerElement:AtREG462 | REG | GGGCTTAT | 68.5 | TAIR9 | 1.2553 | 2.9507 | 1.4167 | 0.9051 | -1.4511 | 2.5546 | 0.2773 | -1.5584 | -0.7363 | 0.3318 | -0.0357 | 0.5810 |
Gene:AT1G01080 | OctamerElement:AtREG375 | OctamerElement:AtREG442 | OctamerElement:AtREG405 | OctamerElement:AtREG390 | OctamerElement:AtREG617 | REG | CCGACCCG | CCCGACCC | ACCCGACC | GACCCGAC | TGACCCGA | 43.5 | 44.5 | 45.5 | 46.5 | 47.5 | TAIR9 | 1.0456 | -0.3976 | -2.2484 | 1.1048 | 1.5059 | 0.5287 | 1.5765 | 1.1881 | 0.5613 | 0.7593 | 0.2263 | 0.0442 |
Gene:AT1G01080 | OctamerElement:AtREG459 | OctamerElement:AtREG359 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | REG | GGCCTTTT | GGGCCTTT | TGGGCCTT | TTGGGCCT | TTTGGGCC | 144.5 | 145.5 | 146.5 | 147.5 | 148.5 | TAIR9 | 1.0456 | -0.3976 | -2.2484 | 1.1048 | 1.5059 | 0.5287 | 1.5765 | 1.1881 | 0.5613 | 0.7593 | 0.2263 | 0.0442 |
Gene:AT1G01080 | OctamerElement:AtREG437 | OctamerElement:AtREG490 | OctamerElement:AtREG361 | OctamerElement:AtREG643 | REG | TGGGCCAT | ATGGGCCA | AATGGGCC | GAATGGGC | 285.5 | 286.5 | 287.5 | 288.5 | TAIR9 | 1.0456 | -0.3976 | -2.2484 | 1.1048 | 1.5059 | 0.5287 | 1.5765 | 1.1881 | 0.5613 | 0.7593 | 0.2263 | 0.0442 |
Gene:AT1G01090 | OctamerElement:AtREG523 | REG | GTGGGTCC | 90.5 | TAIR9 | -0.2429 | 0.1641 | 0.1383 | 0.2934 | 0.3453 | 0.2650 | 0.3398 | 0.2574 | 0.2719 | 0.0247 | -0.2207 | -0.1247 |
Gene:AT1G01100 | OctamerElement:AtREG635 | OctamerElement:AtREG403 | OctamerElement:AtREG380 | REG | GCCCATCA | GGCCCATC | CGGCCCAT | 59.5 | 60.5 | 61.5 | TAIR9 | -1.0304 | 0.4462 | 0.7004 | 0.6541 | -0.0587 | 0.8047 | -0.1739 | 0.1146 | -0.2880 | -0.1915 | -0.3705 | -0.2872 |
Gene:AT1G01100 | OctamerElement:AtREG475 | OctamerElement:AtREG358 | OctamerElement:AtREG354 | OctamerElement:AtREG361 | OctamerElement:AtREG386 | REG | GGGCCTAG | TGGGCCTA | ATGGGCCT | AATGGGCC | AAATGGGC | 81.5 | 82.5 | 83.5 | 84.5 | 85.5 | TAIR9 | -1.0304 | 0.4462 | 0.7004 | 0.6541 | -0.0587 | 0.8047 | -0.1739 | 0.1146 | -0.2880 | -0.1915 | -0.3705 | -0.2872 |
Gene:AT1G01100 | OctamerElement:AtREG355 | OctamerElement:AtREG352 | OctamerElement:AtREG356 | OctamerElement:AtREG353 | REG | GCCCAATA | GGCCCAAT | AGGCCCAA | AAGGCCCA | 120.5 | 121.5 | 122.5 | 123.5 | TAIR9 | -1.0304 | 0.4462 | 0.7004 | 0.6541 | -0.0587 | 0.8047 | -0.1739 | 0.1146 | -0.2880 | -0.1915 | -0.3705 | -0.2872 |
Gene:AT1G01100 | OctamerElement:AtREG533 | OctamerElement:AtREG469 | OctamerElement:AtREG421 | REG | TTGGGCTC | TTTGGGCT | ATTTGGGC | 164.5 | 165.5 | 166.5 | TAIR9 | -1.0304 | 0.4462 | 0.7004 | 0.6541 | -0.0587 | 0.8047 | -0.1739 | 0.1146 | -0.2880 | -0.1915 | -0.3705 | -0.2872 |
Gene:AT1G01100 | OctamerElement:AtREG632 | REG | AAAGTCAA | 182.5 | TAIR9 | -1.0304 | 0.4462 | 0.7004 | 0.6541 | -0.0587 | 0.8047 | -0.1739 | 0.1146 | -0.2880 | -0.1915 | -0.3705 | -0.2872 |
Gene:AT1G01110 | OctamerElement:AtREG599 | REG | GGTGTCGT | 164.5 | TAIR9 | -1.0696 | -0.3329 | 0.6139 | -0.4796 | -0.8558 | -0.0168 | -0.3271 | -0.7433 | -0.7353 | -0.6478 | -0.4592 | -0.3874 |
Gene:AT1G01120 | OctamerElement:AtREG620 | REG | CCCATATA | 168.5 | TAIR9 | 0.8691 | 0.1723 | -0.3227 | -0.6284 | 0.4378 | -1.4472 | -0.3492 | 0.8649 | 1.4340 | 0.2639 | 1.0519 | 0.6885 |
Gene:AT1G01130 | OctamerElement:AtREG611 | OctamerElement:AtREG417 | OctamerElement:AtREG355 | REG | CCAATAAG | CCCAATAA | GCCCAATA | 83.5 | 84.5 | 85.5 | TAIR9 | -0.4167 | -0.3666 | -0.6256 | -0.1351 | -0.1958 | -0.2125 | -0.7262 | -0.4024 | -0.5039 | -0.3408 | 0.5061 | 0.1588 |
Gene:AT1G01140 | OctamerElement:AtREG395 | REG | GCGCGTGA | 52.5 | TAIR9 | 1.3658 | -1.3913 | -4.6930 | -0.4265 | 0.8047 | -1.7026 | -0.2672 | 0.0796 | 0.9521 | 0.8660 | 1.0895 | 1.6853 |
Gene:AT1G01140 | OctamerElement:AtREG523 | OctamerElement:AtREG615 | REG | GGACCCAC | GGGACCCA | 65.5 | 66.5 | TAIR9 | 1.3658 | -1.3913 | -4.6930 | -0.4265 | 0.8047 | -1.7026 | -0.2672 | 0.0796 | 0.9521 | 0.8660 | 1.0895 | 1.6853 |
Gene:AT1G01140 | OctamerElement:AtREG448 | OctamerElement:AtREG379 | OctamerElement:AtREG413 | REG | CGTGGCAT | ACGTGGCA | TACGTGGC | 76.5 | 77.5 | 78.5 | TAIR9 | 1.3658 | -1.3913 | -4.6930 | -0.4265 | 0.8047 | -1.7026 | -0.2672 | 0.0796 | 0.9521 | 0.8660 | 1.0895 | 1.6853 |
Gene:AT1G01160 | OctamerElement:AtREG507 | OctamerElement:AtREG504 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG351 | OctamerElement:AtREG577 | REG | CCATGGGC | CATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTA | GGCCTTAG | 215.5 | 214.5 | 213.5 | 212.5 | 211.5 | 210.5 | TAIR9 | -0.5897 | -0.2003 | 0.2562 | 0.3420 | -0.5621 | 0.8233 | -0.4401 | -0.4022 | -0.3731 | -0.3893 | -0.2151 | -0.2148 |
Gene:AT1G01160 | OctamerElement:AtREG563 | OctamerElement:AtREG360 | OctamerElement:AtREG358 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | CTTAGGCC | TTAGGCCC | TAGGCCCA | AGGCCCAA | GGCCCAAA | GCCCAAAT | 196.5 | 195.5 | 194.5 | 193.5 | 192.5 | 191.5 | TAIR9 | -0.5897 | -0.2003 | 0.2562 | 0.3420 | -0.5621 | 0.8233 | -0.4401 | -0.4022 | -0.3731 | -0.3893 | -0.2151 | -0.2148 |
Gene:AT1G01160 | OctamerElement:AtREG446 | OctamerElement:AtREG484 | OctamerElement:AtREG420 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | ATTGGCCC | TTGGCCCA | TGGCCCAA | GGCCCAAA | GCCCAAAT | 168.5 | 167.5 | 166.5 | 165.5 | 164.5 | TAIR9 | -0.5897 | -0.2003 | 0.2562 | 0.3420 | -0.5621 | 0.8233 | -0.4401 | -0.4022 | -0.3731 | -0.3893 | -0.2151 | -0.2148 |
Gene:AT1G01170 | OctamerElement:AtREG386 | REG | GCCCATTT | 63.5 | TAIR9 | 0.5351 | 0.3850 | -3.3323 | 0.2792 | 0.4643 | 0.1529 | -0.1191 | 0.3487 | 0.7568 | 0.7130 | 0.8406 | 0.9037 |
Gene:AT1G01180 | OctamerElement:AtREG470 | OctamerElement:AtREG557 | OctamerElement:AtREG632 | REG | AGACACGT | GACACGTA | AAAGTCAA | 164.5 | 163.5 | 156.5 | TAIR9 | 0.0302 | -0.0358 | -0.0789 | -0.0523 | 0.0351 | 0.0678 | -0.0173 | -0.0452 | -0.1139 | -0.0047 | 0.0818 | 0.0226 |
Gene:AT1G01230 | OctamerElement:AtREG424 | REG | GGCCTATT | 101.5 | TAIR9 | 0.1812 | 0.0998 | 0.4644 | -0.4377 | -0.2012 | -0.5735 | -0.9986 | -0.2758 | 0.1893 | -0.0288 | -0.0749 | -0.2002 |
Gene:AT1G01240 | OctamerElement:AtREG590 | OctamerElement:AtREG590 | REG | AACACGTG | CACGTGTT | 133.5 | 131.5 | TAIR9 | 0.3756 | -0.1682 | -0.2466 | -0.8311 | 0.0200 | -1.0497 | -1.2738 | -0.0189 | 0.1865 | 0.0998 | 0.3201 | 0.5520 |
Gene:AT1G01240 | OctamerElement:AtREG527 | OctamerElement:AtREG569 | OctamerElement:AtREG520 | REG | GTGTCGTT | TGTCGTTT | GTCGTTTT | 72.5 | 71.5 | 70.5 | TAIR9 | 0.3756 | -0.1682 | -0.2466 | -0.8311 | 0.0200 | -1.0497 | -1.2738 | -0.0189 | 0.1865 | 0.0998 | 0.3201 | 0.5520 |
Gene:AT1G01260 | OctamerElement:AtREG636 | REG | TAAGGGGT | 171.5 | TAIR9 | -0.6803 | -0.4298 | 0.0892 | -0.2211 | -0.4140 | -0.2074 | -0.1326 | -0.1965 | 0.6260 | -0.4062 | 0.0842 | 0.0812 |
Gene:AT1G01260 | OctamerElement:AtREG463 | OctamerElement:AtREG455 | OctamerElement:AtREG412 | OctamerElement:AtREG473 | REG | GACCCGGT | ACCCGGTT | CCGGTTTA | CGGTTTAA | 114.5 | 113.5 | 111.5 | 110.5 | TAIR9 | -0.6803 | -0.4298 | 0.0892 | -0.2211 | -0.4140 | -0.2074 | -0.1326 | -0.1965 | 0.6260 | -0.4062 | 0.0842 | 0.0812 |
Gene:AT1G01320 | OctamerElement:AtREG411 | REG | AGAGGCCC | 144.5 | TAIR9 | 0.6750 | -0.7763 | -3.7772 | 1.2994 | 1.1654 | 0.9057 | 2.2965 | 0.9091 | 0.3918 | 0.5939 | 0.4238 | 0.4871 |
Gene:AT1G01320 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG358 | OctamerElement:AtREG360 | OctamerElement:AtREG563 | REG | CCCATTAA | GCCCATTA | GGCCCATT | AGGCCCAT | TAGGCCCA | TTAGGCCC | CTTAGGCC | 159.5 | 160.5 | 161.5 | 162.5 | 163.5 | 164.5 | 165.5 | TAIR9 | 0.6750 | -0.7763 | -3.7772 | 1.2994 | 1.1654 | 0.9057 | 2.2965 | 0.9091 | 0.3918 | 0.5939 | 0.4238 | 0.4871 |
Gene:AT1G01370 | OctamerElement:AtREG642 | REG | AGGGGTAA | 224.5 | TAIR9 | -0.7818 | 0.1004 | 0.6670 | 1.0520 | -0.3218 | 1.5885 | -0.4115 | -0.1541 | -0.9252 | -0.7635 | -1.1978 | -1.3190 |
Gene:AT1G01430 | OctamerElement:AtREG608 | REG | AAGCCACG | 199.5 | TAIR9 | 1.1448 | 0.9508 | 0.0106 | 0.0316 | 0.6946 | -0.2237 | 0.8086 | 1.1144 | 0.9228 | 1.3445 | 0.9283 | 0.6595 |
Gene:AT1G01470 | OctamerElement:AtREG638 | REG | GACCGACT | 65.5 | TAIR9 | 2.2409 | 1.0865 | 1.5611 | -0.0491 | 0.2713 | -0.5371 | -0.4677 | 1.2656 | 0.9052 | 0.8419 | 0.8584 | 1.1769 |
Gene:AT1G01470 | OctamerElement:AtREG588 | REG | TCACACGT | 108.5 | TAIR9 | 2.2409 | 1.0865 | 1.5611 | -0.0491 | 0.2713 | -0.5371 | -0.4677 | 1.2656 | 0.9052 | 0.8419 | 0.8584 | 1.1769 |
Gene:AT1G01470 | OctamerElement:AtREG557 | OctamerElement:AtREG470 | REG | GACACGTA | AGACACGT | 151.5 | 152.5 | TAIR9 | 2.2409 | 1.0865 | 1.5611 | -0.0491 | 0.2713 | -0.5371 | -0.4677 | 1.2656 | 0.9052 | 0.8419 | 0.8584 | 1.1769 |
Gene:AT1G01480 | OctamerElement:AtREG591 | REG | CCCATGGG | 74.5 | TAIR9 | -0.3685 | -0.3463 | 0.8415 | -0.4724 | -0.0861 | -0.3873 | -0.5413 | -0.5059 | -0.2119 | -0.3985 | -0.1959 | -0.1875 |
Gene:AT1G01490 | OctamerElement:AtREG395 | REG | TCACGCGC | 209.5 | TAIR9 | 0.2728 | 0.4566 | -0.8336 | -0.6756 | -0.1963 | -0.5600 | -0.6347 | -0.4744 | 0.6960 | 0.6861 | 0.7915 | 0.7454 |
Gene:AT1G01490 | OctamerElement:AtREG486 | REG | CACGCGCC | 222.5 | TAIR9 | 0.2728 | 0.4566 | -0.8336 | -0.6756 | -0.1963 | -0.5600 | -0.6347 | -0.4744 | 0.6960 | 0.6861 | 0.7915 | 0.7454 |
Gene:AT1G01500 | OctamerElement:AtREG426 | OctamerElement:AtREG378 | OctamerElement:AtREG372 | OctamerElement:AtREG386 | OctamerElement:AtREG443 | OctamerElement:AtREG610 | REG | TAAGCCCA | AAGCCCAT | AGCCCATT | GCCCATTT | CCCATTTA | TTTAACGG | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | 213.5 | TAIR9 | -0.0942 | -0.7810 | -0.8420 | -0.5545 | -0.0085 | -0.7959 | -0.3597 | 0.4986 | 0.0681 | -0.1642 | -0.2362 | -0.2561 |
Gene:AT1G01500 | OctamerElement:AtREG437 | OctamerElement:AtREG458 | OctamerElement:AtREG384 | REG | ATGGCCCA | TGGCCCAG | GGCCCAGT | 191.5 | 190.5 | 189.5 | TAIR9 | -0.0942 | -0.7810 | -0.8420 | -0.5545 | -0.0085 | -0.7959 | -0.3597 | 0.4986 | 0.0681 | -0.1642 | -0.2362 | -0.2561 |
Gene:AT1G01500 | OctamerElement:AtREG589 | REG | AAAAAGCC | 156.5 | TAIR9 | -0.0942 | -0.7810 | -0.8420 | -0.5545 | -0.0085 | -0.7959 | -0.3597 | 0.4986 | 0.0681 | -0.1642 | -0.2362 | -0.2561 |
Gene:AT1G01500 | OctamerElement:AtREG588 | OctamerElement:AtREG460 | OctamerElement:AtREG541 | REG | TCACACGT | CACACGTG | CACGTGCG | 137.5 | 136.5 | 134.5 | TAIR9 | -0.0942 | -0.7810 | -0.8420 | -0.5545 | -0.0085 | -0.7959 | -0.3597 | 0.4986 | 0.0681 | -0.1642 | -0.2362 | -0.2561 |
Gene:AT1G01500 | OctamerElement:AtREG567 | OctamerElement:AtREG602 | REG | AGGGTATT | GGGTATTT | 110.5 | 109.5 | TAIR9 | -0.0942 | -0.7810 | -0.8420 | -0.5545 | -0.0085 | -0.7959 | -0.3597 | 0.4986 | 0.0681 | -0.1642 | -0.2362 | -0.2561 |
Gene:AT1G01500 | OctamerElement:AtREG592 | REG | TTTGACCC | 80.5 | TAIR9 | -0.0942 | -0.7810 | -0.8420 | -0.5545 | -0.0085 | -0.7959 | -0.3597 | 0.4986 | 0.0681 | -0.1642 | -0.2362 | -0.2561 |
Gene:AT1G01500 | OctamerElement:AtREG646 | REG | CGTAATTA | 69.5 | TAIR9 | -0.0942 | -0.7810 | -0.8420 | -0.5545 | -0.0085 | -0.7959 | -0.3597 | 0.4986 | 0.0681 | -0.1642 | -0.2362 | -0.2561 |
Gene:AT1G01510 | OctamerElement:AtREG540 | OctamerElement:AtREG537 | OctamerElement:AtREG439 | OctamerElement:AtREG415 | OctamerElement:AtREG565 | REG | ACGGCGTC | GGCGTCGT | GCGTCGTT | CGTCGTTT | GTCGTTTA | 208.5 | 206.5 | 205.5 | 204.5 | 203.5 | TAIR9 | -0.7388 | 0.3820 | 0.5461 | 0.3674 | -0.1272 | 0.5714 | -0.1008 | -0.2100 | -0.2123 | -0.2748 | -0.1108 | -0.0953 |
Gene:AT1G01510 | OctamerElement:AtREG578 | REG | GATGACGT | 179.5 | TAIR9 | -0.7388 | 0.3820 | 0.5461 | 0.3674 | -0.1272 | 0.5714 | -0.1008 | -0.2100 | -0.2123 | -0.2748 | -0.1108 | -0.0953 |
Gene:AT1G01510 | OctamerElement:AtREG529 | OctamerElement:AtREG373 | OctamerElement:AtREG392 | OctamerElement:AtREG400 | REG | TTTTGGGC | TTTGGGCC | TTGGGCCC | TGGGCCCT | 112.5 | 111.5 | 110.5 | 109.5 | TAIR9 | -0.7388 | 0.3820 | 0.5461 | 0.3674 | -0.1272 | 0.5714 | -0.1008 | -0.2100 | -0.2123 | -0.2748 | -0.1108 | -0.0953 |
Gene:AT1G01540 | OctamerElement:AtREG630 | REG | CGACATCG | 155.5 | TAIR9 | 0.4690 | -0.2246 | -0.1055 | 0.0728 | 0.7252 | -0.1913 | 0.2762 | 0.0950 | 0.4801 | 0.0825 | 0.8001 | 0.2026 |
Gene:AT1G01550 | OctamerElement:AtREG632 | REG | TTGACTTT | 194.5 | TAIR9 | 0.0246 | -0.0971 | 0.3598 | -0.2948 | -0.2551 | -0.4191 | -0.6266 | -0.5191 | 0.5415 | 0.1419 | 0.5424 | 0.5271 |
Gene:AT1G01560 | OctamerElement:AtREG507 | REG | CCATGGGC | 203.5 | TAIR9 | 1.3224 | -0.6147 | -0.9421 | -1.3439 | -0.7067 | -1.6995 | -1.2036 | -1.2593 | 1.1684 | 0.1542 | 0.5073 | 1.4733 |
Gene:AT1G01620 | OctamerElement:AtREG553 | OctamerElement:AtREG554 | REG | CAACGGTC | TCCAACGG | 444.5 | 446.5 | TAIR9 | -0.0406 | 1.0298 | 1.2670 | 0.2917 | 0.1150 | 0.3531 | -0.4492 | 0.2768 | 0.5348 | 0.2787 | 1.0308 | 0.8591 |
Gene:AT1G01620 | OctamerElement:AtREG475 | REG | CTAGGCCC | 525.5 | TAIR9 | -0.0406 | 1.0298 | 1.2670 | 0.2917 | 0.1150 | 0.3531 | -0.4492 | 0.2768 | 0.5348 | 0.2787 | 1.0308 | 0.8591 |
Gene:AT1G01630 | OctamerElement:AtREG440 | OctamerElement:AtREG419 | OctamerElement:AtREG485 | REG | CTGACGTG | TGACGTGG | TGGGCTCA | 208.5 | 207.5 | 202.5 | TAIR9 | 0.7636 | -0.1267 | 0.1599 | 0.3625 | 0.2561 | 0.0617 | 0.1523 | 0.4507 | -0.0412 | 0.4398 | -0.1841 | -0.3407 |
Gene:AT1G01630 | OctamerElement:AtREG531 | REG | AAAACGGC | 187.5 | TAIR9 | 0.7636 | -0.1267 | 0.1599 | 0.3625 | 0.2561 | 0.0617 | 0.1523 | 0.4507 | -0.0412 | 0.4398 | -0.1841 | -0.3407 |
Gene:AT1G01630 | OctamerElement:AtREG533 | OctamerElement:AtREG402 | OctamerElement:AtREG355 | OctamerElement:AtREG624 | REG | GAGCCCAA | AGCCCAAT | GCCCAATA | CCCAATAG | 104.5 | 103.5 | 102.5 | 101.5 | TAIR9 | 0.7636 | -0.1267 | 0.1599 | 0.3625 | 0.2561 | 0.0617 | 0.1523 | 0.4507 | -0.0412 | 0.4398 | -0.1841 | -0.3407 |
Gene:AT1G01630 | OctamerElement:AtREG425 | OctamerElement:AtREG351 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG352 | OctamerElement:AtREG355 | REG | ATAAGGCC | TAAGGCCC | AAGGCCCA | AGGCCCAA | GGCCCAAT | GCCCAATA | 87.5 | 86.5 | 85.5 | 84.5 | 83.5 | 82.5 | TAIR9 | 0.7636 | -0.1267 | 0.1599 | 0.3625 | 0.2561 | 0.0617 | 0.1523 | 0.4507 | -0.0412 | 0.4398 | -0.1841 | -0.3407 |
Gene:AT1G01650 | OctamerElement:AtREG564 | OctamerElement:AtREG626 | REG | GCGTTTTA | CAGCGTTT | 1082.5 | 1084.5 | TAIR9 | -0.4483 | -1.1014 | 0.0838 | -0.3332 | -0.6280 | -0.4879 | -0.6136 | -0.6299 | -0.2065 | -0.3289 | -0.1639 | 0.1248 |
Gene:AT1G01650 | OctamerElement:AtREG632 | REG | AAAGTCAA | 1095.5 | TAIR9 | -0.4483 | -1.1014 | 0.0838 | -0.3332 | -0.6280 | -0.4879 | -0.6136 | -0.6299 | -0.2065 | -0.3289 | -0.1639 | 0.1248 |
Gene:AT1G01650 | OctamerElement:AtREG486 | REG | CACGCGCC | 1129.5 | TAIR9 | -0.4483 | -1.1014 | 0.0838 | -0.3332 | -0.6280 | -0.4879 | -0.6136 | -0.6299 | -0.2065 | -0.3289 | -0.1639 | 0.1248 |
Gene:AT1G01650 | OctamerElement:AtREG536 | REG | ACACGCGT | 1139.5 | TAIR9 | -0.4483 | -1.1014 | 0.0838 | -0.3332 | -0.6280 | -0.4879 | -0.6136 | -0.6299 | -0.2065 | -0.3289 | -0.1639 | 0.1248 |
Gene:AT1G01650 | OctamerElement:AtREG449 | OctamerElement:AtREG420 | OctamerElement:AtREG484 | REG | GGCCCAAC | TGGCCCAA | TTGGCCCA | 182.5 | 183.5 | 184.5 | TAIR9 | -0.4483 | -1.1014 | 0.0838 | -0.3332 | -0.6280 | -0.4879 | -0.6136 | -0.6299 | -0.2065 | -0.3289 | -0.1639 | 0.1248 |
Gene:AT1G01670 | OctamerElement:AtREG428 | OctamerElement:AtREG478 | OctamerElement:AtREG481 | OctamerElement:AtREG517 | OctamerElement:AtREG466 | OctamerElement:AtREG489 | REG | CGTGTCGT | ACGTGTCG | GACGTGTC | TGACGTGT | GTGACGTG | CGTGACGT | 62.5 | 63.5 | 64.5 | 65.5 | 66.5 | 67.5 | TAIR9 | -0.0634 | -0.0872 | 0.2307 | -0.1317 | 0.0778 | -0.0231 | -0.2456 | -0.2540 | -0.3302 | -0.2050 | 0.0914 | -0.1143 |
Gene:AT1G01690 | OctamerElement:AtREG417 | REG | TTATTGGG | 188.5 | TAIR9 | 0.1467 | -0.2291 | -0.0072 | -0.0980 | 0.1468 | 0.1095 | -0.0049 | 0.0615 | -0.1307 | -0.0487 | -0.0702 | 0.0126 |
Gene:AT1G01690 | OctamerElement:AtREG364 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | TATGGGCC | ATGGGCCA | TGGGCCAT | 169.5 | 168.5 | 167.5 | TAIR9 | 0.1467 | -0.2291 | -0.0072 | -0.0980 | 0.1468 | 0.1095 | -0.0049 | 0.0615 | -0.1307 | -0.0487 | -0.0702 | 0.0126 |
Gene:AT1G01690 | OctamerElement:AtREG558 | OctamerElement:AtREG357 | OctamerElement:AtREG372 | OctamerElement:AtREG378 | OctamerElement:AtREG376 | OctamerElement:AtREG365 | OctamerElement:AtREG601 | OctamerElement:AtREG394 | OctamerElement:AtREG364 | OctamerElement:AtREG354 | OctamerElement:AtREG447 | OctamerElement:AtREG411 | REG | CTAATGGG | TAATGGGC | AATGGGCT | ATGGGCTT | TGGGCTTT | GGGCTTTA | GGCTTTAT | TTATGGGC | TATGGGCC | ATGGGCCT | TGGGCCTC | GGGCCTCT | 149.5 | 148.5 | 147.5 | 146.5 | 145.5 | 144.5 | 143.5 | 139.5 | 138.5 | 137.5 | 136.5 | 135.5 | TAIR9 | 0.1467 | -0.2291 | -0.0072 | -0.0980 | 0.1468 | 0.1095 | -0.0049 | 0.0615 | -0.1307 | -0.0487 | -0.0702 | 0.0126 |
Gene:AT1G01710 | OctamerElement:AtREG504 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | CATGGGCC | ATGGGCCA | TGGGCCAT | 277.5 | 276.5 | 275.5 | TAIR9 | 0.0048 | 0.0933 | -0.4576 | -0.1590 | 0.0596 | -0.1490 | -0.0771 | 0.0016 | -0.2264 | -0.2222 | -0.1781 | -0.2636 |
Gene:AT1G01710 | OctamerElement:AtREG416 | OctamerElement:AtREG416 | OctamerElement:AtREG545 | REG | TTAAGGCC | GGCCTTAA | TTAAAGCC | 239.5 | 235.5 | 231.5 | TAIR9 | 0.0048 | 0.0933 | -0.4576 | -0.1590 | 0.0596 | -0.1490 | -0.0771 | 0.0016 | -0.2264 | -0.2222 | -0.1781 | -0.2636 |
Gene:AT1G01710 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG398 | REG | TTAATGGG | TAATGGGC | AATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTG | 222.5 | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | TAIR9 | 0.0048 | 0.0933 | -0.4576 | -0.1590 | 0.0596 | -0.1490 | -0.0771 | 0.0016 | -0.2264 | -0.2222 | -0.1781 | -0.2636 |
Gene:AT1G01710 | OctamerElement:AtREG590 | OctamerElement:AtREG628 | REG | AACACGTG | ACACGTGA | 93.5 | 92.5 | TAIR9 | 0.0048 | 0.0933 | -0.4576 | -0.1590 | 0.0596 | -0.1490 | -0.0771 | 0.0016 | -0.2264 | -0.2222 | -0.1781 | -0.2636 |
Gene:AT1G01710 | OctamerElement:AtREG575 | REG | CGAACCGA | 71.5 | TAIR9 | 0.0048 | 0.0933 | -0.4576 | -0.1590 | 0.0596 | -0.1490 | -0.0771 | 0.0016 | -0.2264 | -0.2222 | -0.1781 | -0.2636 |
Gene:AT1G01710 | OctamerElement:AtREG513 | REG | GTCCACGT | 63.5 | TAIR9 | 0.0048 | 0.0933 | -0.4576 | -0.1590 | 0.0596 | -0.1490 | -0.0771 | 0.0016 | -0.2264 | -0.2222 | -0.1781 | -0.2636 |
Gene:AT1G01710 | OctamerElement:AtREG598 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | ATAAACCG | TAAACCGG | AAACCGGA | 47.5 | 46.5 | 45.5 | TAIR9 | 0.0048 | 0.0933 | -0.4576 | -0.1590 | 0.0596 | -0.1490 | -0.0771 | 0.0016 | -0.2264 | -0.2222 | -0.1781 | -0.2636 |
Gene:AT1G01720 | OctamerElement:AtREG644 | REG | ACCGGAAA | 280.5 | TAIR9 | -0.7999 | -0.5480 | 0.0732 | -0.9603 | -0.6952 | -1.3808 | -1.2270 | -0.5827 | 0.6697 | 0.4048 | 0.3232 | 1.0643 |
Gene:AT1G01720 | OctamerElement:AtREG451 | REG | GGTTCGGT | 242.5 | TAIR9 | -0.7999 | -0.5480 | 0.0732 | -0.9603 | -0.6952 | -1.3808 | -1.2270 | -0.5827 | 0.6697 | 0.4048 | 0.3232 | 1.0643 |
Gene:AT1G01720 | OctamerElement:AtREG576 | OctamerElement:AtREG569 | REG | GAAACGAC | AAACGACA | 183.5 | 182.5 | TAIR9 | -0.7999 | -0.5480 | 0.0732 | -0.9603 | -0.6952 | -1.3808 | -1.2270 | -0.5827 | 0.6697 | 0.4048 | 0.3232 | 1.0643 |
Gene:AT1G01720 | OctamerElement:AtREG471 | OctamerElement:AtREG371 | OctamerElement:AtREG388 | OctamerElement:AtREG419 | OctamerElement:AtREG440 | OctamerElement:AtREG515 | REG | TCGCCACG | CGCCACGT | GCCACGTC | CCACGTCA | CACGTCAG | ACGTCAGC | 146.5 | 145.5 | 144.5 | 143.5 | 142.5 | 141.5 | TAIR9 | -0.7999 | -0.5480 | 0.0732 | -0.9603 | -0.6952 | -1.3808 | -1.2270 | -0.5827 | 0.6697 | 0.4048 | 0.3232 | 1.0643 |
Gene:AT1G01720 | OctamerElement:AtREG472 | REG | ACGTGTCC | 113.5 | TAIR9 | -0.7999 | -0.5480 | 0.0732 | -0.9603 | -0.6952 | -1.3808 | -1.2270 | -0.5827 | 0.6697 | 0.4048 | 0.3232 | 1.0643 |
Gene:AT1G01720 | OctamerElement:AtREG464 | OctamerElement:AtREG382 | OctamerElement:AtREG460 | REG | CCCACGTG | CCACGTGT | CACGTGTG | 90.5 | 89.5 | 88.5 | TAIR9 | -0.7999 | -0.5480 | 0.0732 | -0.9603 | -0.6952 | -1.3808 | -1.2270 | -0.5827 | 0.6697 | 0.4048 | 0.3232 | 1.0643 |
Gene:AT1G01720 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG366 | OctamerElement:AtREG472 | REG | CGACACGT | GACACGTG | CACGTGTC | ACGTGTCC | 50.5 | 49.5 | 47.5 | 46.5 | TAIR9 | -0.7999 | -0.5480 | 0.0732 | -0.9603 | -0.6952 | -1.3808 | -1.2270 | -0.5827 | 0.6697 | 0.4048 | 0.3232 | 1.0643 |
Gene:AT1G01730 | OctamerElement:AtREG520 | OctamerElement:AtREG569 | OctamerElement:AtREG527 | REG | GTCGTTTT | AAACGACA | AACGACAC | 169.5 | 168.5 | 167.5 | TAIR9 | -0.5406 | 0.2608 | 0.1547 | -0.2031 | -1.5223 | -0.0100 | -0.9203 | -0.7027 | -0.1644 | -0.4436 | -0.2490 | -0.1026 |