Contact

Link and Publish your data

to the Linked Open Data Community

Linkdata Work Information

DIURNAL normalized gene expression + PLACE promoter motif

Open Smart Phone View
Normalized Expression Data of DIURNAL circadian conditions, combined with PLACE (Plant Cis-acting Regulatory DNA Elements) motif database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
6

value

useful
0
Loading...



Select a file name to see the detais.
Show API List
   
#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_COL_LDHH_normalize
#download_from http://linkdata.org/work/rdf1s747i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:COL_LDHH_normalize_0_hours label:COL_LDHH_normalize_4_hours label:COL_LDHH_normalize_8_hours label:COL_LDHH_normalize_12_hours label:COL_LDHH_normalize_16_hours label:COL_LDHH_normalize_20_hours label:COL_LDHH_normalize_24_hours label:COL_LDHH_normalize_28_hours label:COL_LDHH_normalize_32_hours label:COL_LDHH_normalize_36_hours label:COL_LDHH_normalize_40_hours label:COL_LDHH_normalize_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at COL_LDHH 0 0.825563 0.999702 1.109225 1.137800 0.864908 1.017793 0.953829 1.034826 1.001197 1.066809 0.799741 1.034510 0.979660 21.151384 0.032347
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at COL_LDHH 21 0.964883 1.141509 0.888237 0.807859 0.778783 1.044109 1.249650 1.166063 0.962260 0.877873 0.771612 1.146346 1.165698 15.052317 0.110689
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at COL_LDHH 18 0.965106 0.979799 0.771462 0.722303 0.915423 1.295974 1.323385 0.920463 0.724075 0.745812 0.858536 1.372221 1.370547 12.280633 0.173563
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at COL_LDHH 14 0.842288 0.945898 0.881450 1.097425 0.951314 1.087908 1.116482 0.857300 0.879056 1.001250 1.037477 1.029500 1.114938 9.662132 0.043175
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at COL_LDHH 5 0.866051 1.056153 1.199754 1.057693 0.980283 0.926245 0.880837 1.000083 1.093954 1.022802 0.910060 0.944609 0.927527 22.543822 0.054036
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at COL_LDHH 19 0.968398 1.112234 0.793780 0.591025 0.937711 1.117023 1.484894 1.162361 0.749804 0.538818 1.018000 1.135683 1.358667 13.424916 0.187767
TAIR:ATMG00710 - - - - TAIR9 244907_at COL_LDHH 7 0.961456 0.732671 1.217230 1.620197 0.855035 0.755316 0.826454 0.698389 1.322504 1.597904 0.798625 0.793086 0.782588 0.885240 0.192822
TAIR:ATMG00720 - - - - TAIR9 244908_at COL_LDHH 5 0.974305 1.054153 1.290477 1.198810 0.917132 0.844136 0.749995 1.116659 1.251743 1.201846 0.899142 0.793709 0.682197 23.250293 0.137806
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at COL_LDHH 0 0.939909 1.195413 0.951007 0.982515 0.989670 0.944505 1.000049 1.310850 0.887985 0.888913 0.933351 0.973481 0.942264 17.157893 0.049463
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at COL_LDHH 5 0.921308 0.991457 1.150387 1.092670 0.967924 0.894198 0.903290 0.980739 1.084051 1.047588 1.012845 0.883698 0.991154 23.397234 0.051326
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at COL_LDHH 13 0.877040 0.766668 0.924227 0.592597 1.536827 1.005504 1.071571 0.749628 0.908458 0.623033 1.670028 1.045498 1.105961 8.518479 0.139040
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at COL_LDHH 6 0.922728 0.879292 1.255295 1.212430 0.840475 0.959824 0.831632 0.923113 1.213379 1.202203 0.875403 1.039260 0.767693 0.295759 0.093008
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at COL_LDHH 7 0.992500 0.660932 1.130471 1.864974 0.755227 0.695617 0.743978 0.657953 1.205400 2.038816 0.737763 0.703468 0.805401 1.147418 0.248656
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at COL_LDHH 6 0.946604 0.966261 1.158748 1.211111 0.904757 0.782573 0.792886 0.952947 1.255091 1.313839 0.948054 0.856433 0.857301 23.956067 0.119057
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at COL_LDHH 5 0.870652 0.786369 1.363372 1.168977 1.008498 0.725598 1.001085 0.727892 1.419640 1.107959 1.031459 0.735327 0.923825 0.107111 0.120866
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at COL_LDHH 6 0.987298 0.619839 1.573065 1.510623 0.785930 0.758822 0.732010 0.649466 1.535142 1.531447 0.842359 0.792594 0.668703 0.549571 0.233216
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at COL_LDHH 8 0.821067 1.042774 0.945169 1.176116 0.957946 1.079484 0.813562 0.983945 1.035095 1.130158 0.992363 1.082445 0.760942 2.573324 0.050799
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at COL_LDHH 11 0.925265 0.854926 1.008101 0.973875 1.371233 0.849296 0.930035 0.800085 1.024020 1.010254 1.390128 0.833984 0.954064 4.560155 0.088008
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at COL_LDHH 12 0.797377 1.070948 1.251080 0.783013 1.556818 0.819287 0.609963 1.043566 1.146803 0.707241 1.589549 0.766671 0.655061 9.371522 0.096902
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at COL_LDHH 4 0.949721 0.867444 1.796702 0.943708 0.719209 0.949595 0.813464 0.789130 1.686834 1.004778 0.669276 1.017684 0.742177 22.223216 0.154157
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at COL_LDHH 8 0.800798 1.010535 1.000579 1.137712 0.904464 1.059773 0.894744 0.995763 0.925498 1.216121 0.879930 1.047756 0.927126 1.596375 0.027678
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at COL_LDHH 7 0.963325 0.898536 1.081405 1.410971 0.897142 0.772970 0.890273 0.954054 1.095338 1.491334 0.894104 0.727550 0.886323 0.398504 0.130754
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at COL_LDHH 7 0.964456 0.846423 1.116810 1.450134 0.902110 0.787766 0.786164 0.853765 1.211325 1.459811 0.940365 0.797015 0.848311 0.876423 0.149617
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at COL_LDHH 14 0.805618 0.956720 0.961196 1.017177 1.016375 0.981519 1.013604 0.917702 0.923137 1.028460 1.112300 1.020443 1.051365 7.423503 0.027147
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at COL_LDHH 8 0.785766 1.105198 0.965268 1.141456 1.001320 0.999134 0.858747 1.066196 1.052279 1.082717 0.901583 1.043702 0.782399 11.718455 0.040361
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at COL_LDHH 2 0.732140 1.088503 1.063873 0.902345 1.068131 1.004304 0.885279 1.075807 1.121670 0.930358 1.019146 0.983077 0.857507 22.151252 0.023488
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at COL_LDHH 13 0.719671 0.773132 0.948166 1.001638 1.236134 0.891891 1.142416 0.803088 0.907213 0.962857 1.222630 0.961661 1.149173 7.427937 0.064280
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at COL_LDHH 7 0.907584 0.923446 1.012391 1.209660 0.933535 0.971267 0.990573 0.906706 1.099351 1.107369 0.938780 0.956308 0.950612 1.058903 0.042020
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at COL_LDHH 6 0.947150 0.892304 1.443279 1.216072 0.869911 0.736376 0.862023 0.901914 1.331869 1.313157 0.933784 0.708307 0.791005 23.566821 0.160282
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at COL_LDHH 8 0.838732 0.764158 1.373582 1.072716 1.100473 0.916402 0.642559 0.725382 1.502345 1.118219 1.150283 0.968553 0.665329 1.569783 0.147530
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at COL_LDHH 5 0.708695 0.779345 1.331933 1.057016 0.881812 0.697134 1.192371 0.836101 1.355752 1.080447 0.862385 0.670500 1.255205 14.541437 0.092647
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at COL_LDHH 20 0.899992 0.768174 0.954455 0.813696 1.117868 0.943883 1.524488 0.762990 0.949552 0.768687 1.022524 0.922982 1.450700 23.656886 0.098233
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at COL_LDHH 18 0.848282 1.012402 1.033652 0.933099 0.923607 1.086592 1.091332 0.941874 0.981958 0.890137 0.919987 1.061182 1.124178 13.861726 0.042836
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at COL_LDHH 6 0.897236 0.838655 1.271188 1.142924 0.772648 0.998481 0.917019 0.862259 1.369487 1.190779 0.743697 0.959761 0.933103 22.952796 0.087414
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at COL_LDHH 5 0.887918 0.923406 1.158770 1.011935 0.838994 1.022826 0.969407 0.926307 1.256178 1.087628 0.883423 0.994289 0.926838 22.444550 0.047248
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at COL_LDHH 8 0.916086 1.026881 1.093591 0.992930 1.048863 1.247115 0.649574 0.998437 1.036016 1.053339 1.039392 1.160318 0.653543 3.660115 0.058406
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at COL_LDHH 12 0.872579 1.017039 0.639842 0.833072 1.560757 0.934036 1.080958 0.943236 0.698161 0.876560 1.480220 0.848706 1.087412 8.405452 0.110712
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at COL_LDHH 14 0.911865 0.811970 0.790452 1.112988 1.218306 0.987115 1.069492 0.738722 0.727715 1.165374 1.264199 1.069551 1.044116 6.943625 0.110302
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at COL_LDHH 8 0.862189 1.114227 1.020647 1.339371 0.926044 0.837329 0.816893 1.047948 0.945784 1.307241 0.910578 0.853998 0.879940 11.957566 0.088404
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at COL_LDHH 5 0.760711 0.922442 1.167847 1.044204 0.892881 0.919208 1.118651 0.885700 1.249209 0.950119 0.927765 0.841339 1.080634 15.128247 0.047714
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at COL_LDHH 21 0.859974 1.125469 0.719886 0.985899 0.992307 0.850813 1.336861 1.081876 0.719945 1.073641 0.920351 0.842665 1.350287 14.150469 0.075206
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at COL_LDHH 0 0.898587 1.392485 0.934760 0.798962 0.960038 1.027876 0.860397 1.349892 0.855296 0.852989 1.029437 1.071822 0.866046 19.842496 0.059763
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at COL_LDHH 6 0.976824 0.889439 1.382220 1.460212 0.776834 0.733149 0.821622 0.912134 1.394247 1.332628 0.817948 0.703999 0.775570 23.517791 0.184413
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at COL_LDHH 10 0.928701 0.955344 0.933244 1.141695 1.091114 0.924475 0.933377 0.921415 0.976976 1.238442 1.114331 0.863080 0.906506 2.874192 0.065536
TAIR:ATMG00150 - - - - TAIR9 244949_at COL_LDHH 0 0.678233 1.089542 0.966421 1.092126 0.957738 0.860835 0.924335 1.167042 0.926357 1.071671 0.994281 0.946554 1.003098 21.371737 0.030060
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at COL_LDHH 15 0.916929 0.986328 0.565266 1.122741 1.210905 1.009565 1.140357 0.980700 0.611948 1.205931 1.197317 0.929310 1.039633 8.042359 0.086814
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at COL_LDHH 22 0.948822 1.327257 1.066302 0.609815 0.766701 1.111880 1.158092 1.240134 1.167053 0.595416 0.714859 1.157965 1.084527 15.974515 0.153234
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at COL_LDHH 2 0.816219 0.973118 1.034160 1.084572 0.907502 0.893754 1.054303 0.947965 1.074815 1.073640 0.938666 0.909050 1.108456 21.240145 0.029019
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at COL_LDHH 0 0.760276 1.131806 0.944598 1.028439 0.895327 1.036044 0.906918 1.175173 0.982193 1.098816 0.961820 0.934292 0.904573 20.740464 0.029881
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at COL_LDHH 2 0.782610 1.041221 1.021322 1.010781 0.918474 0.889260 1.105384 0.939772 1.121445 1.008156 0.887355 0.948250 1.108579 18.843380 0.036324
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at COL_LDHH 6 0.945696 0.825114 1.176006 1.307416 0.809525 0.902777 0.951600 0.857267 1.203300 1.382693 0.820008 0.822739 0.941554 0.056953 0.104710
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at COL_LDHH 10 0.834040 0.889013 1.040447 0.996900 1.031711 1.154387 0.869839 0.804337 1.021086 0.990085 1.104993 1.216698 0.880505 6.335775 0.059936
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at COL_LDHH 6 0.977100 0.585207 2.129729 1.608388 0.604347 0.524330 0.626227 0.635273 1.975983 1.663392 0.557431 0.501168 0.588524 23.513024 0.373782
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at COL_LDHH 1 0.869654 1.339266 1.115250 1.005471 0.832579 0.957656 0.738025 1.381200 1.057958 1.092468 0.877580 0.882826 0.719720 20.968530 0.100127
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at COL_LDHH 12 0.746314 0.862503 1.277287 0.694698 1.406338 0.848969 0.875552 0.908529 1.287376 0.635851 1.541930 0.802800 0.858168 8.691436 0.056791
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at COL_LDHH 5 0.799161 0.944007 1.104110 1.082347 0.898484 0.917108 1.001190 0.885177 1.214445 1.001967 0.926025 0.933295 1.091845 14.095047 0.038856
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at COL_LDHH 13 0.833768 0.934286 0.956115 0.961666 1.073433 1.024762 0.974583 1.011622 0.943391 1.003096 1.077491 1.022421 1.017132 7.978533 0.025454
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at COL_LDHH 8 0.820826 0.810064 1.032190 1.047095 1.197592 0.932185 0.950448 0.887815 1.095898 1.068941 1.083504 0.869830 1.024439 3.366301 0.053004
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at COL_LDHH 19 0.743651 0.976155 0.901711 0.988935 0.912661 1.048674 1.068209 1.062979 0.847278 1.028229 0.940946 1.049405 1.174817 12.931645 0.042759
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at COL_LDHH 0 0.573297 1.003848 1.043422 1.041215 0.900264 1.044905 1.029700 1.099547 0.939170 0.969128 0.958161 1.026553 0.944086 18.930555 0.015650
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at COL_LDHH 12 0.890283 0.680052 1.231133 1.145717 1.020013 0.987482 0.983289 0.657388 1.133111 1.032589 1.105559 0.953241 1.070426 8.441400 0.066312
TAIR:ATCG00600 - - - - TAIR9 244966_at COL_LDHH 4 0.953504 0.579164 1.926305 0.900634 0.887574 0.979296 0.739604 0.615470 1.905919 0.819496 0.857526 1.045951 0.743060 23.497468 0.148831
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at COL_LDHH 14 0.860042 0.935259 0.943600 0.934907 1.048624 1.096701 0.981002 0.896209 1.002934 1.011374 1.072583 1.068841 1.007966 8.063467 0.036721
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at COL_LDHH 22 0.707228 0.926986 1.163935 0.895031 0.856814 0.998651 1.115685 0.906769 1.242143 0.907536 0.777229 1.022528 1.186694 17.412637 0.054144
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at COL_LDHH 23 0.879751 0.976932 1.257648 0.926277 0.682593 1.023748 1.161989 1.016885 1.218415 0.928510 0.670440 0.989415 1.147148 18.025728 0.091620
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at COL_LDHH 20 0.844241 1.086899 1.075032 0.546453 1.166318 1.212230 0.875919 1.004103 0.986867 0.567222 1.253735 1.308944 0.916279 0.836945 0.084125
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at COL_LDHH 15 0.854747 0.823651 0.900858 0.957013 1.213177 1.059490 1.109099 0.786484 0.860563 1.007140 1.217032 0.979124 1.086370 7.838811 0.079259
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at COL_LDHH 11 0.925300 0.495735 0.703624 1.083857 1.851172 0.883724 1.015742 0.501526 0.702127 1.050174 1.830486 0.862971 1.018861 6.274584 0.242675
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at COL_LDHH 8 0.912315 0.244942 1.430369 1.777309 1.172837 0.644630 0.722159 0.249319 1.525035 1.619755 1.248295 0.653709 0.711641 2.237364 0.313541
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at COL_LDHH 12 0.807136 0.533749 1.292909 1.143939 0.814376 1.146781 0.994345 0.549617 1.344019 1.171231 0.838173 1.121509 1.049352 9.119892 0.063373
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at COL_LDHH 6 0.876220 0.738033 1.233077 1.221439 0.973581 0.965643 0.906207 0.702457 1.172127 1.248746 0.903474 0.958234 0.976982 1.858500 0.087222
TAIR:ATCG00720 - - - - PPDB 244976_at COL_LDHH 13 0.862671 0.952035 0.962422 0.949286 1.063029 1.009193 0.987864 0.936662 0.948496 1.027975 1.134445 1.042669 0.985924 7.156899 0.033263
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at COL_LDHH 17 0.819629 1.005168 0.957792 1.011576 1.030809 1.015746 1.059642 0.969601 0.891707 0.944695 0.966957 1.055986 1.090320 11.606195 0.030177
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at COL_LDHH 5 0.821089 0.808835 1.494170 1.060020 0.716676 0.746990 1.123001 0.883301 1.418682 1.097895 0.653135 0.791441 1.205855 15.094278 0.125977
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at COL_LDHH 21 0.866362 1.017156 1.043813 0.715546 0.672678 1.098563 1.420823 0.941209 1.082654 0.687809 0.657449 1.155329 1.506972 14.856258 0.162591
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at COL_LDHH 22 0.915408 1.058259 1.261935 0.628921 0.773121 1.015514 1.272851 1.087612 1.227712 0.592613 0.769665 1.055197 1.256600 16.153445 0.138026
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at COL_LDHH 5 0.638189 0.823091 1.363418 1.002918 0.701578 0.908505 1.252390 0.845784 1.232408 0.907509 0.757004 0.944285 1.261110 17.479113 0.074302
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at COL_LDHH 4 0.819680 0.839044 1.297501 0.737593 0.935845 1.021638 1.032583 0.901843 1.402808 0.758154 0.918985 1.065824 1.088181 18.079717 0.042092
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at COL_LDHH 13 0.844723 0.846222 0.955191 0.727830 1.260095 1.076637 0.934754 0.927581 1.040679 0.720177 1.356151 1.155402 0.999281 8.738532 0.079320
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at COL_LDHH 4 0.949023 0.777098 1.571684 0.904721 0.782891 0.936600 0.997531 0.853868 1.517051 0.928102 0.825193 0.843078 1.062182 21.322681 0.102190
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at COL_LDHH 4 0.758489 0.763156 1.297915 0.811041 0.986841 1.042278 1.082419 0.835599 1.324830 0.731032 0.983617 1.073469 1.067803 19.682285 0.017123
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at COL_LDHH 4 0.826859 0.895209 1.304226 0.988733 0.833768 0.957280 1.106907 0.814283 1.231315 0.931240 0.914885 0.952215 1.069939 15.435009 0.042822
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at COL_LDHH 21 0.925538 1.067181 0.901721 0.894453 0.880231 1.003515 1.095496 1.144774 0.972990 0.952993 0.839546 1.079673 1.167427 15.185854 0.067021
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at COL_LDHH 12 0.731085 0.864868 1.081614 1.054286 0.930666 0.962797 1.088690 0.808587 1.048106 1.107027 0.933562 0.971076 1.148720 10.143120 0.009775
TAIR:ATCG01280 - - - - TAIR9 244989_s_at COL_LDHH 19 0.719004 1.100519 0.951303 0.889093 1.074575 1.144838 0.898593 1.069433 0.977798 0.801840 1.122626 1.054343 0.915041 1.101840 0.029568
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at COL_LDHH 2 0.673086 1.157328 1.249218 0.991556 0.800036 1.088884 0.769505 1.123548 1.148659 1.042143 0.739505 1.145191 0.744427 21.094659 0.068100
* Row count is limited to 100.