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DIURNAL normalized gene expression + PLACE promoter motif

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Normalized Expression Data of DIURNAL circadian conditions, combined with PLACE (Plant Cis-acting Regulatory DNA Elements) motif database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_COL_SD_normalize
#download_from http://linkdata.org/work/rdf1s747i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:COL_SD_normalize_0_hours label:COL_SD_normalize_4_hours label:COL_SD_normalize_8_hours label:COL_SD_normalize_12_hours label:COL_SD_normalize_16_hours label:COL_SD_normalize_20_hours label:COL_SD_normalize_24_hours label:COL_SD_normalize_28_hours label:COL_SD_normalize_32_hours label:COL_SD_normalize_36_hours label:COL_SD_normalize_40_hours label:COL_SD_normalize_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at COL_SD 8 0.863079 1.062359 0.985291 1.147505 0.977249 0.990689 0.837161 1.117599 1.010738 1.052994 1.012862 1.033296 0.772259 11.080851 0.041846
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at COL_SD 17 0.907450 1.019291 0.790928 0.932267 1.012084 1.073984 1.090975 1.112311 0.866451 0.953375 1.107364 1.035792 1.005179 11.284667 0.048693
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at COL_SD 17 0.863026 0.969191 0.873541 0.723482 0.974855 1.444908 1.042478 1.029940 0.851150 0.695292 1.054622 1.350898 0.989642 11.328238 0.123470
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at COL_SD 0 0.712254 1.167439 0.802824 1.177486 0.738717 1.071914 1.109681 1.120271 0.767706 1.130544 0.681211 1.112472 1.119735 20.775303 0.058147
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at COL_SD 20 0.753841 0.945633 1.091768 0.915482 0.868316 0.927472 1.229232 0.919111 1.136996 0.922401 0.884998 0.990723 1.167869 16.565864 0.048936
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at COL_SD 12 0.929285 0.822605 0.934498 1.086532 1.350585 0.989384 0.898801 0.782234 0.856822 1.098997 1.238190 0.975990 0.965362 5.605756 0.103186
TAIR:ATMG00710 - - - - TAIR9 244907_at COL_SD 8 0.920727 0.830938 0.929213 1.315395 0.933477 0.925422 1.088519 0.866276 0.978652 1.356816 0.880356 0.906014 0.988922 2.192154 0.057681
TAIR:ATMG00720 - - - - TAIR9 244908_at COL_SD 0 0.497181 1.044445 0.898479 1.057007 1.038098 1.049173 0.945147 1.088095 0.985894 0.960461 1.054680 0.952266 0.926253 4.979971 0.007932
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at COL_SD 21 0.580087 1.159346 0.948929 0.890993 0.947127 1.110034 0.878606 1.127204 1.003003 0.840641 1.004790 1.171892 0.917436 21.961316 0.033062
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at COL_SD 11 0.941743 0.986760 0.917275 1.018084 1.180265 0.921609 0.872118 0.993559 0.911185 1.084285 1.259886 0.937583 0.917389 4.590144 0.056437
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at COL_SD 18 0.869898 0.838350 0.996179 0.441820 0.849555 1.509701 1.429172 0.820324 0.999526 0.444909 0.894895 1.393425 1.382144 12.652081 0.207397
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at COL_SD 8 0.689320 1.062908 1.107363 0.900088 0.967118 1.075923 0.831936 1.121250 1.174272 0.855636 1.027683 1.080959 0.794862 14.696318 0.024056
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at COL_SD 3 0.891220 1.045920 1.083154 1.039312 0.990815 0.786776 0.989551 1.047454 1.127196 0.969720 0.984585 0.858445 1.077072 21.044870 0.051202
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at COL_SD 13 0.746383 0.976227 0.809193 1.035076 1.100217 1.030043 0.929368 1.046152 0.889397 0.961500 1.188644 1.038815 0.995368 7.861891 0.045983
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at COL_SD 2 0.921897 1.092743 1.170871 1.178527 0.710157 0.800004 0.967573 1.155855 1.174783 1.125802 0.699976 0.865779 1.057930 20.575227 0.110831
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at COL_SD 7 0.944933 0.939582 1.065476 1.240751 0.841840 0.980352 0.898490 0.878362 1.082649 1.294131 0.851559 0.955102 0.971706 0.507071 0.063880
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at COL_SD 4 0.780669 1.040660 1.059765 1.004092 0.954701 0.953973 0.961936 0.946491 1.116491 0.978437 1.035350 0.984747 0.963357 22.742051 0.022482
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at COL_SD 21 0.816613 1.046431 0.959125 1.011907 0.837824 1.058064 1.135893 1.110600 0.876769 0.928505 0.822472 0.966852 1.245560 15.251664 0.068998
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at COL_SD 20 0.829018 1.047638 1.208065 0.623513 1.119461 1.043750 0.857436 1.144688 1.282587 0.658014 1.056521 1.029335 0.928991 17.400061 0.040294
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at COL_SD 19 0.792570 0.958326 0.949722 0.816017 1.099824 1.120012 0.946671 1.016441 1.006532 0.887284 1.108828 1.059059 1.031283 1.717834 0.039866
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at COL_SD 6 0.871002 0.995459 1.120873 1.103338 0.921509 1.010426 0.831770 0.899821 1.148345 1.158155 0.887713 1.019098 0.903492 0.328642 0.055481
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at COL_SD 20 0.733503 0.908616 1.000580 1.068424 0.838317 0.976174 1.215355 0.837080 1.047050 1.124850 0.895386 0.883058 1.205110 17.420617 0.018528
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at COL_SD 2 0.905376 1.142380 0.955829 1.091669 0.779298 0.787222 1.181248 1.132261 0.987322 1.174940 0.845615 0.791905 1.130312 19.195036 0.074816
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at COL_SD 22 0.839444 1.067882 0.885090 1.001920 0.941165 0.920824 1.075613 1.127596 0.851368 1.007978 0.936702 1.005140 1.178722 21.162715 0.042517
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at COL_SD 3 0.849558 1.141578 1.227773 0.898841 0.831481 1.064195 0.873213 1.036866 1.234743 0.818240 0.912744 1.018974 0.941351 16.670262 0.059630
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at COL_SD 16 0.729307 1.012164 0.813942 0.988473 1.003835 1.024262 1.117602 1.078424 0.880591 1.067901 0.920750 0.945056 1.146999 13.173581 0.036571
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at COL_SD 16 0.775751 1.181650 0.763961 1.095332 1.009309 0.956069 1.101039 1.186955 0.761634 0.989349 0.981861 0.882054 1.090788 14.472460 0.037967
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at COL_SD 7 0.848332 0.938753 1.027388 1.143427 0.912715 0.867318 0.996945 0.927164 1.062108 1.180726 0.990759 0.894162 1.058536 0.058283 0.043067
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at COL_SD 0 0.895482 1.299761 0.987323 0.890846 0.824224 0.798303 1.140055 1.376840 1.048138 0.976215 0.867446 0.744523 1.046326 18.410605 0.116582
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at COL_SD 19 0.890687 1.000994 0.986358 0.777391 1.139386 0.992468 1.016475 1.063317 0.971480 0.774487 1.182681 1.014570 1.080394 0.073187 0.042890
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at COL_SD 20 0.980788 1.117834 0.889938 0.765619 0.922653 1.084402 1.167769 1.131811 0.892255 0.722704 0.940008 1.126118 1.238887 13.896889 0.110539
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at COL_SD 22 0.880757 1.265829 0.812096 0.676654 0.968065 0.907773 1.330671 1.251347 0.888689 0.625125 1.035233 0.928875 1.309642 14.742266 0.141276
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at COL_SD 19 0.854867 1.022758 0.912024 0.870673 1.064818 1.132902 1.088617 0.982861 0.992217 0.827510 1.016087 1.091933 0.997601 11.741679 0.051258
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at COL_SD 20 0.872351 1.042498 0.968222 0.742886 1.099228 1.116905 1.035688 0.988105 1.052356 0.729537 1.083818 1.198397 0.942359 0.258573 0.057893
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at COL_SD 20 0.872361 0.971108 1.050358 0.408835 1.103547 1.463983 1.026575 1.055807 1.026838 0.396004 1.114259 1.405482 0.977203 23.972436 0.143707
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at COL_SD 22 0.954997 1.232733 1.119929 0.813794 0.746006 1.052792 1.192260 1.141174 1.021280 0.798477 0.748933 1.000594 1.132029 16.472458 0.115703
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at COL_SD 22 0.896139 1.467914 0.841406 0.520184 0.850759 0.970953 1.309028 1.600631 0.894058 0.503024 0.825922 1.035481 1.180641 15.526753 0.207875
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at COL_SD 20 0.895865 1.286055 0.804660 0.634685 1.023400 1.032012 1.216961 1.258108 0.747621 0.649721 0.992304 1.063181 1.291292 13.972827 0.146632
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at COL_SD 17 0.826434 0.849454 1.059713 0.976934 0.886344 1.164749 0.997113 0.915174 0.991573 1.010585 0.861452 1.210384 1.076524 10.931087 0.030784
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at COL_SD 20 0.817314 1.006115 1.023468 0.848141 0.982454 1.035348 1.136704 0.952353 1.021980 0.892111 1.015610 0.977838 1.107878 13.948208 0.039037
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at COL_SD 19 0.913374 1.038483 0.681710 0.702729 0.971572 1.003866 1.554083 1.108550 0.682303 0.723916 0.904970 1.086552 1.541266 13.311636 0.183569
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at COL_SD 5 0.953828 0.943655 1.265357 0.972457 0.897005 0.935600 0.949358 0.897804 1.219794 1.058759 0.983816 0.982140 0.894255 23.135631 0.055914
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at COL_SD 3 0.673112 1.057138 1.096533 1.026733 0.941647 1.053435 0.890987 0.997798 1.146950 0.944560 0.884184 1.086076 0.873959 21.766279 0.026859
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at COL_SD 16 0.637324 0.997389 0.909661 0.964688 1.068979 0.931963 1.084770 0.944146 0.951477 0.892692 1.165369 0.943031 1.145834 10.756784 0.029483
TAIR:ATMG00150 - - - - TAIR9 244949_at COL_SD 2 0.942118 1.164403 1.116081 0.997886 0.725142 0.809681 1.111220 1.230453 1.092027 1.093105 0.713565 0.827315 1.119122 19.060963 0.113637
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at COL_SD 12 0.841460 0.681387 1.041074 0.877795 1.057864 1.134087 1.154464 0.687496 1.138582 0.877738 1.139149 1.083964 1.126402 8.657500 0.063474
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at COL_SD 12 0.858198 0.581157 1.054733 0.990808 1.084233 0.956571 1.282100 0.598722 1.012631 1.027938 1.024193 1.046036 1.340878 8.545582 0.062980
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at COL_SD 0 0.734367 1.161993 0.998243 0.865079 1.047717 0.863214 1.090487 1.075312 1.032879 0.926002 0.990701 0.918319 1.030054 17.462610 0.041107
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at COL_SD 0 0.912899 1.085566 1.254048 0.742574 0.797294 0.860458 1.358037 1.030874 1.181531 0.784398 0.725256 0.865600 1.314366 17.070946 0.130625
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at COL_SD 23 0.900740 1.182453 1.039753 0.907135 0.945958 0.916610 1.051173 1.273201 0.993827 0.880971 0.881550 0.847112 1.080256 17.740412 0.078075
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at COL_SD 4 0.832174 1.132218 1.005115 0.974437 1.003738 0.846296 1.003181 1.090640 1.105289 0.955739 1.063702 0.804906 1.014738 15.541868 0.044677
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at COL_SD 16 0.792938 0.995247 1.114861 0.837325 0.847969 1.307300 0.937533 0.934953 1.138418 0.867148 0.911472 1.237516 0.870258 12.842273 0.029203
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at COL_SD 1 0.786489 0.984017 1.137099 1.023886 0.804234 0.935684 1.192710 0.907892 1.041870 1.019086 0.794153 1.019318 1.140052 18.394204 0.046112
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at COL_SD 7 0.834139 1.039797 1.049736 1.139437 0.869435 0.946453 0.931635 0.941917 1.060676 1.123315 0.913878 1.016751 0.966972 12.765295 0.037657
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at COL_SD 20 0.673043 0.923941 1.122227 0.867187 1.158283 0.980494 0.963627 0.890104 1.076910 0.783890 1.159422 1.077557 0.996358 4.163706 0.026191
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at COL_SD 1 0.638296 1.165554 0.975091 0.851902 1.164360 0.876387 0.957911 1.208933 1.048693 0.918351 1.147092 0.807351 0.878375 20.781919 0.029710
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at COL_SD 15 0.925604 0.976764 0.910371 0.918741 1.012982 1.108292 0.978224 0.972430 0.991124 0.951040 1.040452 1.201755 0.937826 9.605052 0.040534
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at COL_SD 14 0.852481 0.967367 0.935595 0.862150 1.055591 1.200367 0.998193 0.902878 0.950816 0.864430 1.146214 1.097764 1.018635 9.811043 0.060292
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at COL_SD 20 0.657859 0.948719 0.947757 0.931886 1.099914 0.969409 1.052843 0.984341 1.026940 0.968727 1.005317 0.929024 1.135123 23.798810 0.015255
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at COL_SD 19 0.797385 1.018344 0.990672 0.893940 1.060712 1.149674 1.024790 1.013438 0.902215 0.809585 1.029153 1.141748 0.965729 0.723737 0.050375
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at COL_SD 20 0.891848 1.145645 0.793891 0.922739 0.943936 1.145024 1.098347 1.151150 0.763832 0.931536 0.944107 1.116062 1.043733 12.878491 0.073466
TAIR:ATCG00600 - - - - TAIR9 244966_at COL_SD 12 0.818085 0.922582 0.764859 1.096628 0.962288 1.229806 0.983059 0.902887 0.776428 1.192876 1.054540 1.216225 0.897822 7.791246 0.079223
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at COL_SD 14 0.846734 0.946505 0.867952 0.909683 1.097186 1.169686 1.001189 1.022734 0.899051 0.823481 1.198880 1.077374 0.986278 9.689374 0.064431
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at COL_SD 17 0.818157 1.099738 0.886332 0.952279 1.048967 1.011460 0.977019 1.008881 0.904875 1.036961 1.007366 1.018702 1.047420 11.213467 0.020212
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at COL_SD 0 0.740180 1.192815 1.005330 0.930175 1.014099 0.962572 0.959471 1.120149 0.906974 0.847589 1.082230 1.055000 0.923596 20.672516 0.023599
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at COL_SD 0 0.889143 1.397594 0.848374 0.815883 0.968062 1.097904 0.969814 1.332788 0.847920 0.812139 0.990808 1.013306 0.905409 20.654901 0.074613
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at COL_SD 16 0.853177 0.965447 0.957709 0.882653 1.098520 1.061909 1.128467 0.903507 0.969370 0.816855 1.155355 1.030046 1.030163 10.416562 0.049200
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at COL_SD 15 0.857574 0.882206 1.043696 0.822705 1.143197 1.215790 0.819667 0.957572 1.018010 0.786384 1.098908 1.328110 0.883757 8.662792 0.064808
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at COL_SD 13 0.948899 0.944376 0.920217 0.780500 1.326605 1.055735 0.891916 1.006949 0.951272 0.853170 1.381809 1.034533 0.852915 7.294065 0.071647
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at COL_SD 3 0.792472 1.092468 1.285666 0.720213 1.155547 0.810202 0.917141 1.084291 1.310774 0.773285 1.048894 0.841717 0.959803 20.491122 0.066718
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at COL_SD 8 0.809013 0.950359 1.048713 0.988851 1.109723 0.900729 0.900057 1.001256 1.129969 1.029815 1.173271 0.937364 0.829893 1.951232 0.052063
TAIR:ATCG00720 - - - - PPDB 244976_at COL_SD 16 0.843928 0.897381 1.012737 0.993930 1.011528 1.183939 0.911417 0.972566 1.037071 0.960664 0.946211 1.109133 0.963423 4.026873 0.023893
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at COL_SD 0 0.603890 0.933501 1.091308 1.080532 0.891446 1.132054 0.967332 0.875005 1.163730 0.974583 0.828562 1.081275 0.980671 22.439396 0.011704
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at COL_SD 23 0.770410 1.201448 0.831462 0.922047 1.111601 0.928114 1.011827 1.262360 0.789100 0.857018 1.089768 0.961259 1.033994 22.039594 0.044367
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at COL_SD 19 0.925422 1.122663 0.935368 0.712674 0.976514 1.141749 1.053819 1.163433 0.924319 0.766738 1.013451 1.080770 1.108501 13.782294 0.084503
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at COL_SD 19 0.866792 1.266137 0.959186 0.740617 1.065671 1.020069 1.100072 1.212511 0.930920 0.686932 0.992375 1.021725 1.003786 14.906835 0.082519
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at COL_SD 19 0.810004 1.212279 0.981949 0.825810 1.035443 1.007525 0.986050 1.183708 0.928407 0.762975 1.070571 0.954246 1.051037 15.230470 0.054380
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at COL_SD 23 0.864721 1.341594 1.035547 0.704852 0.987465 0.906667 1.089238 1.285211 1.070068 0.680850 0.905513 0.821019 1.171978 16.828376 0.118930
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at COL_SD 19 0.890820 1.258502 0.848370 0.624820 1.038397 1.159021 1.069639 1.220435 0.922140 0.654140 1.005313 1.232873 0.966349 13.523388 0.107950
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at COL_SD 16 0.643759 1.063613 0.959350 1.003004 1.011505 1.042363 0.974873 1.044845 0.977706 0.932290 0.914781 1.125932 0.949739 13.184612 0.016715
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at COL_SD 21 0.905905 1.087248 0.946525 0.696573 0.924569 1.188643 1.039597 1.121676 1.020696 0.745625 0.975056 1.167194 1.086599 13.746368 0.086270
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at COL_SD 1 0.797431 1.178298 1.071005 0.736118 0.958528 1.009838 0.982086 1.292829 1.090553 0.772460 0.948465 0.916005 1.043814 18.968988 0.080979
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at COL_SD 18 0.852456 1.082083 0.917661 0.914803 1.089811 1.013952 1.108167 1.012866 0.858025 0.873992 1.047215 0.952962 1.128464 12.590358 0.046677
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at COL_SD 19 0.842695 0.975218 0.888602 0.860431 1.028748 1.117532 1.010839 1.055496 0.972336 0.847031 1.091612 1.124902 1.027253 0.704645 0.052280
TAIR:ATCG01280 - - - - TAIR9 244989_s_at COL_SD 8 0.660539 1.146183 0.899691 1.155097 0.889520 0.882873 0.986090 1.057249 0.870896 1.168115 0.920148 0.952164 1.071976 15.519861 0.023955
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at COL_SD 9 0.835326 1.028304 0.597426 1.390772 1.056870 1.038535 0.902943 0.945770 0.627250 1.500253 1.022825 1.021751 0.867302 5.144229 0.092633
* Row count is limited to 100.