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DIURNAL normalized gene expression + PLACE promoter motif

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Normalized Expression Data of DIURNAL circadian conditions, combined with PLACE (Plant Cis-acting Regulatory DNA Elements) motif database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_LDHH_SM_normalize
#download_from http://linkdata.org/work/rdf1s747i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:LDHH_SM_normalize_0_hours label:LDHH_SM_normalize_4_hours label:LDHH_SM_normalize_8_hours label:LDHH_SM_normalize_12_hours label:LDHH_SM_normalize_16_hours label:LDHH_SM_normalize_20_hours label:LDHH_SM_normalize_24_hours label:LDHH_SM_normalize_28_hours label:LDHH_SM_normalize_32_hours label:LDHH_SM_normalize_36_hours label:LDHH_SM_normalize_40_hours label:LDHH_SM_normalize_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at LDHH_SM 16 0.723666 0.859814 0.840199 0.764756 0.973291 1.246104 1.328632 1.037890 0.868465 1.205041 1.348970 0.849316 0.677521 3.905127 0.058570
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at LDHH_SM 14 0.662548 0.751570 0.755785 0.616454 0.951435 1.090467 0.839378 0.732169 1.193098 1.392510 1.916148 0.867216 0.893771 6.574391 0.128631
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at LDHH_SM 16 0.627309 0.478577 0.605225 0.358046 0.760774 1.371934 1.488199 1.111292 0.827726 1.248001 2.518553 0.644882 0.586792 4.162590 0.164212
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at LDHH_SM 8 0.462624 0.771708 0.980496 0.987817 0.800506 0.877268 0.975056 0.961069 0.952125 1.299585 1.311307 1.031763 1.051299 4.243640 0.046288
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at LDHH_SM 5 0.593330 0.940644 1.194671 1.004945 0.973753 0.889739 0.984590 0.950734 1.009368 1.002221 1.082294 0.913118 1.053922 23.389928 0.027035
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at LDHH_SM 15 0.566156 0.717593 1.048095 0.795108 1.017829 1.096886 1.197482 0.895813 1.007081 1.040773 1.404276 0.930075 0.848990 5.139625 0.058930
TAIR:ATMG00710 - - - - TAIR9 244907_at LDHH_SM 3 0.748393 1.061558 1.162225 1.005332 0.930135 0.676578 1.102102 0.897918 0.991216 1.248519 0.980420 0.886199 1.057799 22.224711 0.055271
TAIR:ATMG00720 - - - - TAIR9 244908_at LDHH_SM 6 0.589332 0.918176 1.045393 1.399874 0.864703 0.894615 1.091346 1.046273 1.008606 0.893189 0.910960 0.939786 0.987080 13.797220 0.035159
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at LDHH_SM 23 0.622396 1.145720 0.899755 0.989262 0.935264 0.921931 1.015221 1.131279 1.036140 0.797850 1.137338 1.008696 0.981543 19.971875 0.029882
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at LDHH_SM 19 0.424779 1.166776 0.889951 0.935989 0.841518 0.947196 0.845193 0.981657 0.966226 1.046643 1.068402 1.263952 1.046499 23.740512 0.019099
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at LDHH_SM 12 0.340732 0.586008 0.629247 0.625563 1.202608 0.963197 1.149643 1.972669 0.901866 1.285275 1.419391 0.599717 0.664816 7.579898 0.011595
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at LDHH_SM 22 0.816023 1.070048 0.992791 0.939963 0.883047 0.767004 1.119082 1.188338 0.994694 0.910029 0.992262 0.991903 1.150841 17.120951 0.060540
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at LDHH_SM 8 0.681642 0.816247 0.935106 1.114356 0.840213 0.782699 0.890922 1.249965 0.934314 1.513498 1.139516 0.904145 0.879017 10.961585 0.077954
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at LDHH_SM 8 0.472084 1.135702 0.984205 1.166687 0.983757 0.870891 0.935670 0.815564 1.001529 1.060040 0.872316 1.056217 1.117421 12.707486 0.017054
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at LDHH_SM 6 0.401147 0.816856 1.061369 1.041056 0.923299 0.961063 0.905910 1.272212 0.917383 1.002456 1.282689 0.879761 0.935946 1.789032 0.027465
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at LDHH_SM 7 0.671323 1.041966 0.926905 1.009603 0.970855 1.025731 0.814158 1.115626 1.042983 1.182685 1.068334 0.876376 0.924779 0.623923 0.038117
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at LDHH_SM 8 0.613481 0.775161 0.866961 1.310383 0.996719 1.029631 1.151696 1.041558 0.918740 1.042470 1.070991 0.846541 0.949147 4.777903 0.037067
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at LDHH_SM 13 0.675672 0.172657 0.231868 0.177927 1.589687 1.348083 1.012839 1.489691 1.578859 1.774977 2.168313 0.233097 0.222002 7.288455 0.206637
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at LDHH_SM 13 0.766502 0.092671 0.123526 0.108651 1.656605 1.771065 0.985009 0.951253 1.881768 1.821337 2.327177 0.102042 0.178897 6.895602 0.279035
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at LDHH_SM 23 0.394710 0.898791 0.790462 0.806881 0.862976 0.963418 1.098619 1.169032 1.123360 1.310081 1.094579 0.919857 0.961946 20.514808 0.010255
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at LDHH_SM 11 0.822919 0.837501 1.023768 1.158433 0.921862 1.026634 0.960289 0.665782 1.052562 1.125466 1.186112 1.011143 1.030445 4.571480 0.065529
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at LDHH_SM 12 0.549514 0.702364 0.877796 0.820505 1.046070 1.090286 1.032369 1.275772 0.908914 1.149874 1.491075 0.791528 0.813446 5.854356 0.055777
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at LDHH_SM 5 0.530267 1.267996 1.237310 1.572181 0.784017 0.677244 0.760665 0.989025 0.752344 1.014941 0.710266 1.163230 1.070780 14.025714 0.075701
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at LDHH_SM 13 0.571824 0.905933 1.002745 0.945247 1.084800 0.982489 1.058648 1.039018 1.001158 1.082995 1.073874 0.974480 0.848613 8.007427 0.024155
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at LDHH_SM 21 0.525577 0.933327 1.032815 1.040545 1.074842 0.744459 1.143781 1.135094 0.820631 1.009133 0.959539 1.002781 1.103053 16.467867 0.016811
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at LDHH_SM 13 0.723098 0.567899 0.728287 0.568987 1.537576 1.197462 0.910878 1.226433 1.096887 1.382168 1.514274 0.606786 0.662364 6.901634 0.123081
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at LDHH_SM 11 0.487809 0.364668 0.404477 0.331223 1.035651 0.991177 1.058120 1.793660 1.119312 1.794794 2.298933 0.365456 0.442529 7.735320 0.130334
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at LDHH_SM 8 0.568768 1.006891 0.979463 1.030473 1.003509 1.020252 0.789543 1.133392 0.854850 1.227451 1.098542 0.878659 0.976974 2.198049 0.036715
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at LDHH_SM 8 0.660591 0.950405 1.098973 1.149557 0.969095 0.939938 1.016864 0.896820 0.878657 1.086801 1.040859 1.175517 0.796514 4.057982 0.042275
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at LDHH_SM 12 0.538130 0.742712 0.663324 0.692075 1.100814 0.992139 1.014395 1.411670 1.161370 1.218449 1.665434 0.554139 0.783480 8.175252 0.052342
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at LDHH_SM 13 0.711301 0.632907 0.741066 0.608383 1.235302 1.173034 0.921201 1.069113 1.292388 1.386207 1.576096 0.617268 0.747035 7.546377 0.104350
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at LDHH_SM 18 0.542010 0.859415 0.928045 0.919002 1.210747 0.938539 1.236745 1.229078 0.748377 0.918103 1.146882 0.851385 1.013683 0.976340 0.039297
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at LDHH_SM 4 0.495829 1.156693 1.096769 1.151466 0.899151 0.901493 0.884942 0.964210 0.887138 0.959242 0.951386 1.071969 1.075541 15.682434 0.020336
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at LDHH_SM 6 0.714410 1.083048 1.099012 1.034993 0.919406 0.834399 0.749133 0.869631 1.001428 1.071573 1.196818 1.016826 1.123733 1.362043 0.037191
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at LDHH_SM 23 0.635754 1.568119 1.699260 1.104702 0.570513 0.487453 0.689168 0.598962 0.633512 0.825236 0.552034 1.305689 1.965351 17.636202 0.140356
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at LDHH_SM 14 0.562368 0.313121 0.444627 0.386354 1.078590 1.740235 1.027789 1.602969 1.100490 1.267078 2.098342 0.393403 0.547003 4.968005 0.137870
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at LDHH_SM 5 0.545485 0.978894 0.951633 1.145527 0.928419 0.788807 0.868460 1.043117 0.963362 1.017393 1.292678 0.897542 1.124168 1.745834 0.032084
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at LDHH_SM 21 0.681280 1.031710 0.945108 0.927664 1.018279 0.997609 1.118962 1.034336 0.887643 1.035998 1.057662 0.849561 1.095468 22.317145 0.021159
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at LDHH_SM 10 0.589258 1.108143 0.762994 1.339144 1.104126 0.978209 0.936880 0.991904 0.910898 0.911586 1.126654 0.860855 0.968606 4.533183 0.034688
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at LDHH_SM 6 0.577687 1.243828 1.063878 1.200738 1.060661 0.890708 0.834720 0.986012 1.060650 0.815176 0.990554 0.882120 0.970955 13.808679 0.045568
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at LDHH_SM 15 0.632617 0.953318 0.795202 0.882673 0.873109 1.197815 0.808741 1.086781 0.842253 1.143002 1.855230 0.847746 0.714131 6.273427 0.095553
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at LDHH_SM 5 0.653894 0.779867 1.248576 1.104032 0.915012 1.068623 0.820148 0.840861 1.210068 0.881032 0.937589 0.988328 1.205865 0.128951 0.026049
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at LDHH_SM 6 0.680582 0.924111 1.056693 1.157375 1.023221 0.911133 0.895871 1.165397 0.910180 1.146796 1.037044 0.831075 0.941104 0.582097 0.050516
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at LDHH_SM 0 0.558193 1.060858 0.973555 1.013157 1.043288 1.054004 0.980526 1.188910 0.982557 0.955275 1.094365 0.785163 0.868342 22.105846 0.019406
TAIR:ATMG00150 - - - - TAIR9 244949_at LDHH_SM 7 0.600587 1.010975 1.030096 1.070904 0.948153 1.043048 0.788132 0.966063 1.116121 0.944684 1.193949 0.929721 0.958153 1.936766 0.036552
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at LDHH_SM 15 0.519046 0.378807 0.500051 0.390417 0.691295 1.713808 1.239145 1.764436 0.811134 1.558553 2.054798 0.485664 0.411892 4.456916 0.108388
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at LDHH_SM 14 0.730163 0.554981 0.873383 0.479364 1.336601 0.897292 1.169604 0.551166 0.734425 1.944993 2.207067 0.668534 0.582589 6.844212 0.235103
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at LDHH_SM 0 0.562650 1.098148 0.946818 1.127938 1.003569 1.016713 0.979293 1.077911 0.951523 0.983580 1.013247 0.917719 0.883541 23.651270 0.015407
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at LDHH_SM 11 0.707604 0.782641 0.951403 1.029538 0.914339 1.089315 0.859520 0.962843 1.037622 1.605309 1.169308 0.769908 0.828254 9.420886 0.099563
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at LDHH_SM 18 0.537331 0.883857 1.097983 0.911581 0.937349 1.008078 1.074317 1.044690 0.891548 1.060232 0.927505 1.111403 1.051455 13.140822 0.021438
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at LDHH_SM 6 0.573501 1.016511 0.963588 1.085048 1.007956 0.881607 0.959930 0.998821 1.108975 0.898857 1.247751 0.915799 0.915157 1.686843 0.030652
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at LDHH_SM 23 0.667936 1.104460 0.877922 0.973832 0.870846 0.887534 1.018813 1.166341 0.932212 0.991625 1.069785 1.108401 0.998228 20.533837 0.027822
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at LDHH_SM 8 0.719330 0.923480 0.922258 1.169373 0.858887 0.861125 0.904642 1.228654 0.918118 1.424087 1.148557 0.879074 0.761744 1.120648 0.077445
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at LDHH_SM 5 0.365597 0.849230 0.980514 1.006683 0.830659 0.819689 0.991823 1.256063 1.064500 0.926222 1.340542 0.937423 0.996651 13.849498 0.018945
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at LDHH_SM 14 0.513004 0.212157 0.413446 0.222912 0.766786 1.258328 1.436174 1.505129 0.914148 2.098434 2.151457 0.383698 0.637331 5.851447 0.123601
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at LDHH_SM 8 0.675206 0.888811 1.050165 0.844834 1.014761 0.972505 0.717926 0.799009 1.243627 1.205937 1.380032 0.974269 0.908125 3.209066 0.083456
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at LDHH_SM 16 0.465187 0.953188 0.947679 1.058318 0.949995 0.933667 0.984622 1.118647 0.891986 0.996462 1.173034 0.989706 1.002695 5.577862 0.010630
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at LDHH_SM 13 0.706494 0.824533 0.823985 0.750321 1.215487 1.175901 0.986142 1.109650 1.076791 1.184316 1.198636 0.807153 0.847087 6.110640 0.047669
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at LDHH_SM 23 0.630809 1.181275 1.066345 1.076055 0.856840 0.804056 0.970957 1.130047 0.801072 1.000569 1.028843 1.002331 1.081610 18.628050 0.037516
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at LDHH_SM 2 0.449482 1.377218 1.273567 1.184737 0.740450 0.832280 0.773044 0.802969 0.752782 0.973140 0.949727 1.207734 1.132352 20.005969 0.034377
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at LDHH_SM 13 0.744931 0.697949 0.824247 0.719188 1.232513 1.040772 0.795823 0.982243 1.229244 1.358148 1.583162 0.762773 0.773937 7.828297 0.118698
TAIR:ATCG00600 - - - - TAIR9 244966_at LDHH_SM 13 0.780783 0.532571 0.491234 0.359784 1.405142 1.307906 0.828954 0.809615 1.353882 1.728785 1.553209 0.741152 0.887766 6.291141 0.159134
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at LDHH_SM 12 0.727347 0.892712 0.918554 0.874672 1.046255 1.009759 0.979662 0.962431 1.038745 1.058135 1.302182 0.950225 0.966667 6.109853 0.040673
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at LDHH_SM 1 0.519462 1.216297 1.180000 0.975301 0.876808 1.009509 0.802869 0.797525 0.797507 0.842824 0.893898 1.183264 1.424197 21.855699 0.053216
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at LDHH_SM 8 0.283551 1.192996 1.274023 0.874546 0.910934 1.087159 0.665161 0.791106 0.916061 0.891079 1.127404 0.976467 1.293063 19.903089 0.009989
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at LDHH_SM 14 0.598788 0.203253 0.360837 0.213824 1.312172 1.585528 1.265499 1.585194 1.218279 1.511389 2.086232 0.253964 0.403830 5.618682 0.148078
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at LDHH_SM 16 0.735484 0.947892 0.884649 0.842021 1.040696 1.079516 1.064570 1.003227 0.899028 1.043342 1.241732 0.942911 1.010414 2.920616 0.042840
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at LDHH_SM 5 0.756830 1.002972 1.287257 1.395069 0.844595 0.659595 1.004675 1.084431 0.868382 1.180737 1.152381 0.605288 0.914619 23.413027 0.112996
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at LDHH_SM 11 0.672370 0.575790 0.880938 0.735108 1.148199 0.963407 0.872229 1.078997 1.203528 1.390722 1.860863 0.612520 0.677699 8.272272 0.139653
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at LDHH_SM 4 0.434093 1.436889 1.485161 0.969215 0.812347 0.709818 0.537598 0.805653 0.755840 0.837767 1.582712 0.568491 1.498510 21.672486 0.064560
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at LDHH_SM 7 0.532904 1.030172 1.048446 0.975885 0.956930 0.968430 0.885628 0.834133 1.009057 1.098827 1.102481 0.961296 1.128716 2.981905 0.019112
TAIR:ATCG00720 - - - - PPDB 244976_at LDHH_SM 0 0.562878 1.111980 1.092194 1.095857 0.920739 0.964339 1.030756 0.961911 0.855022 1.027023 0.865826 1.079447 0.994904 18.011307 0.015869
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at LDHH_SM 13 0.711802 0.365281 0.315697 0.323319 2.331954 1.433762 0.851596 1.491745 0.825574 2.064858 1.143607 0.267962 0.584646 6.541669 0.199901
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at LDHH_SM 4 0.594120 1.370410 1.272003 1.267966 0.666461 0.730966 0.692699 0.876972 0.797022 0.830851 0.930877 1.137798 1.425975 17.225662 0.064666
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at LDHH_SM 3 0.666920 2.168234 1.952946 1.711418 0.315353 0.288318 0.551747 0.647031 0.257334 0.386885 0.329051 1.487697 1.903987 17.900996 0.213964
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at LDHH_SM 3 0.677321 1.558578 1.425036 1.478099 0.555045 0.484811 0.571504 1.153878 0.478753 0.606264 0.879178 1.213627 1.595227 17.714458 0.118840
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at LDHH_SM 5 0.445625 1.119266 1.272180 0.862437 0.912359 0.774080 0.708794 1.146438 0.688339 1.064604 1.455166 0.788642 1.207696 23.029851 0.030447
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at LDHH_SM 19 0.338738 0.791627 0.874468 0.659767 0.949195 1.025842 0.812355 1.450700 1.023382 1.045742 1.359624 0.883809 1.123488 23.231377 0.017835
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at LDHH_SM 13 0.650297 0.825754 0.935678 0.776621 1.060102 1.177965 0.828348 0.959890 1.104461 1.169017 1.285397 0.865719 1.011049 6.548798 0.051762
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at LDHH_SM 9 0.488956 1.024598 1.105196 0.950862 0.990602 1.036512 0.813051 0.837661 1.009741 0.990496 1.073980 1.017020 1.150281 5.199890 0.013685
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at LDHH_SM 22 0.558880 1.217352 1.039579 0.961459 0.931255 0.964179 0.814487 0.951195 0.856901 0.889622 0.905777 1.132934 1.335262 21.243408 0.048000
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at LDHH_SM 12 0.394605 0.944579 0.997833 0.884142 1.020377 1.122525 0.777293 0.883780 1.052687 1.024684 1.050185 1.031963 1.209952 8.118478 0.024995
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at LDHH_SM 22 0.504965 1.120396 1.078038 1.030885 0.988407 0.952526 0.950937 0.944194 0.944697 0.910661 1.001016 1.056292 1.021950 17.415244 0.008246
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at LDHH_SM 2 0.580957 1.057971 1.090933 1.060024 0.939983 0.988485 0.919714 1.013830 0.843220 0.900321 1.015625 1.093122 1.076771 22.610430 0.014178
TAIR:ATCG01280 - - - - TAIR9 244989_s_at LDHH_SM 11 0.413355 0.511003 0.476188 0.557954 1.380058 0.935391 1.292334 2.039826 0.543259 1.741349 1.513444 0.448372 0.560823 5.639148 0.062605
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at LDHH_SM 12 0.750386 0.148922 0.134062 0.094462 2.361055 1.201308 0.815865 1.807023 1.210289 1.407619 2.518516 0.108843 0.192036 5.449598 0.265553
* Row count is limited to 100.