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DIURNAL normalized gene expression + PLACE promoter motif

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Normalized Expression Data of DIURNAL circadian conditions, combined with PLACE (Plant Cis-acting Regulatory DNA Elements) motif database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_LER_SD_normalize
#download_from http://linkdata.org/work/rdf1s747i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:LER_SD_normalize_0_hours label:LER_SD_normalize_4_hours label:LER_SD_normalize_8_hours label:LER_SD_normalize_12_hours label:LER_SD_normalize_16_hours label:LER_SD_normalize_20_hours label:LER_SD_normalize_24_hours label:LER_SD_normalize_28_hours label:LER_SD_normalize_32_hours label:LER_SD_normalize_36_hours label:LER_SD_normalize_40_hours label:LER_SD_normalize_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at LER_SD 16 0.958800 0.800122 0.803994 0.661873 1.325974 1.188748 1.208069 0.868292 0.858347 0.702479 1.212427 1.193359 1.176316 10.297543 0.139153
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at LER_SD 17 0.907092 0.967678 0.828268 0.948441 1.066932 0.996590 1.117506 1.057242 0.790659 0.985195 1.037732 1.090875 1.112881 11.064533 0.056929
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at LER_SD 20 0.746037 0.964203 1.066180 0.883332 1.099105 1.081436 1.067935 0.874760 1.024527 0.824536 1.050788 1.029556 1.033640 1.273977 0.031620
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at LER_SD 9 0.966572 0.948312 0.901401 1.446021 0.980058 0.818957 0.901374 0.881751 0.947112 1.319580 1.046336 0.890785 0.918313 2.170888 0.092882
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at LER_SD 8 0.853443 0.952202 0.928798 1.111229 1.022427 1.001578 0.909047 1.010022 1.009165 1.140973 0.940973 0.986040 0.987548 2.504476 0.027857
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at LER_SD 16 0.858511 0.789421 0.938383 0.673305 1.290260 1.214563 1.139070 0.860858 0.946342 0.617291 1.362795 1.133222 1.034491 9.718606 0.117480
TAIR:ATMG00710 - - - - TAIR9 244907_at LER_SD 9 0.767882 1.028137 0.962047 1.168514 1.063332 0.822213 0.891264 1.100668 0.958952 1.250738 0.975330 0.798542 0.980262 11.825370 0.061261
TAIR:ATMG00720 - - - - TAIR9 244908_at LER_SD 1 0.858033 1.095300 1.008874 1.018301 0.966768 0.945401 0.995136 1.054517 1.003061 0.962477 0.959189 0.998121 0.992855 18.763340 0.022249
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at LER_SD 8 0.894928 0.914837 0.955250 1.176382 0.956499 0.997925 1.005309 0.887966 0.891965 1.212355 0.971998 1.000945 1.028570 4.339379 0.034818
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at LER_SD 8 0.935295 0.992604 0.932512 1.209483 0.927763 0.904037 0.919696 0.975599 1.018723 1.317145 0.872149 0.948535 0.981754 11.425697 0.052835
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at LER_SD 21 0.895174 1.086396 1.014871 0.597619 0.797170 1.229465 1.178676 0.994886 1.109439 0.545962 0.821679 1.331980 1.291857 14.047099 0.148073
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at LER_SD 20 0.638922 1.068822 0.994807 0.898208 1.000988 1.017513 0.934244 1.108213 1.026565 0.900187 1.071173 1.068139 0.911142 14.997323 0.011349
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at LER_SD 9 0.970312 0.876139 0.875715 1.883754 1.049297 0.710025 0.799599 0.901177 0.809006 1.703780 0.966758 0.652780 0.771968 1.880215 0.191452
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at LER_SD 4 0.888521 1.144485 1.022158 1.020356 0.935126 0.905668 0.861879 1.098765 1.121166 1.069637 0.971547 0.909352 0.939861 21.750861 0.053507
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at LER_SD 9 0.900891 0.897583 0.856311 1.226891 1.030940 0.980608 1.006570 0.911415 0.898230 1.172786 1.106939 0.918660 0.993067 4.653976 0.053386
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at LER_SD 1 0.805230 1.158448 0.987305 0.956910 1.034400 1.006196 0.963607 1.069624 1.033919 0.962915 0.985633 0.955494 0.885550 19.940941 0.019313
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at LER_SD 16 0.935859 1.011942 0.985554 0.950292 1.017850 1.086117 1.018914 0.911137 0.960706 1.030216 1.087203 1.006053 0.934014 4.608348 0.023966
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at LER_SD 4 0.792457 0.918538 1.191179 0.957300 0.944606 1.031580 0.897924 0.951929 1.239590 1.025586 0.875498 1.126940 0.839329 23.461334 0.037750
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at LER_SD 22 0.752354 0.947162 1.273836 0.781001 0.886120 1.092210 1.058495 0.891695 1.234008 0.788399 0.883042 1.061826 1.102205 16.615226 0.048329
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at LER_SD 9 0.843793 1.043322 0.841327 1.250240 1.052453 0.926213 0.830383 1.111124 0.835595 1.303274 1.007285 0.949926 0.848859 2.472897 0.061077
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at LER_SD 9 0.983504 0.846145 0.866896 1.511879 1.182068 0.861613 0.787974 0.783533 0.828080 1.576192 1.066152 0.907830 0.781638 3.235389 0.157367
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at LER_SD 15 0.956513 0.963329 0.923143 0.924089 1.026122 1.212752 0.969356 0.959947 0.864231 0.871502 1.032032 1.291208 0.962289 10.004567 0.071005
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at LER_SD 8 0.949736 1.036078 0.777419 1.595854 0.847511 0.792491 0.987727 0.986628 0.843590 1.597588 0.877644 0.729501 0.927968 11.083157 0.102292
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at LER_SD 4 0.783998 0.947746 1.063193 1.001873 0.975236 0.921586 1.020932 1.019773 1.047033 1.007260 1.053322 0.839209 1.102838 14.670787 0.022140
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at LER_SD 21 0.961435 1.036406 1.028520 0.810410 0.994948 1.054373 1.074113 1.092217 1.003388 0.759034 0.972603 1.074742 1.099247 14.287653 0.061262
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at LER_SD 23 0.898158 1.246293 1.016858 0.812660 0.829673 1.053180 1.007275 1.319143 1.011940 0.821525 0.816237 1.021952 1.043264 19.329308 0.097915
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at LER_SD 19 0.968397 1.014112 0.864195 0.708222 0.933125 1.110266 1.363523 0.990724 0.861499 0.684130 0.968113 1.111822 1.390270 13.228593 0.141325
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at LER_SD 8 0.746030 1.095838 0.987494 1.221739 0.903852 1.046713 0.886112 1.036715 0.980375 1.180640 0.856760 0.995428 0.808333 11.866673 0.045759
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at LER_SD 9 0.929131 0.989933 0.860846 1.395285 0.984468 0.753357 0.972431 0.946290 0.868889 1.373474 1.077752 0.801739 0.975534 10.165586 0.081002
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at LER_SD 20 0.793833 0.948106 1.158606 0.781958 1.094854 1.058513 0.988297 0.923099 1.183011 0.744099 1.142997 1.000518 0.975942 0.177400 0.011241
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at LER_SD 21 0.977787 1.064309 1.087302 0.665083 0.971687 1.073248 1.146583 1.099038 1.100473 0.688829 0.897464 1.154354 1.051631 14.819235 0.086252
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at LER_SD 20 0.704479 1.298706 0.913128 0.755350 0.855383 1.268232 0.933865 1.207656 0.985682 0.800177 0.896261 1.232402 0.853158 14.552059 0.076613
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at LER_SD 22 0.776431 1.027762 0.970424 0.935294 0.953513 0.992564 1.065676 1.042170 1.043554 0.987888 0.926099 1.055797 0.999259 15.865899 0.023980
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at LER_SD 20 0.883518 1.053534 0.991525 0.908556 0.880611 1.163862 1.096101 1.035911 0.920257 0.950196 0.857842 1.092589 1.049016 14.032982 0.052852
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at LER_SD 16 0.906703 1.056550 0.922886 0.783864 0.923853 1.394990 0.972454 0.989339 0.973171 0.790129 0.895844 1.331666 0.965254 11.973222 0.086194
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at LER_SD 1 0.788870 1.093699 0.959582 1.103971 0.854670 0.957639 0.998178 1.061847 1.027434 1.160987 0.813008 1.023316 0.945668 20.708019 0.036268
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at LER_SD 21 0.898775 1.400126 0.923325 0.473815 0.901360 1.162205 1.191835 1.460085 0.921948 0.492040 0.826883 1.049917 1.196460 15.131100 0.189223
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at LER_SD 19 0.977881 1.108551 0.933835 0.562348 1.094371 1.182298 1.120270 1.119556 0.964902 0.616839 1.011932 1.167100 1.117999 13.203143 0.114594
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at LER_SD 12 0.838412 0.963753 0.907830 1.179583 1.169557 1.043683 0.826626 1.035036 0.825148 1.077416 1.108955 1.086021 0.776392 4.968776 0.069611
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at LER_SD 5 0.876889 0.925841 1.214639 1.044811 1.033496 0.946163 0.922903 0.928239 1.148893 0.959110 1.017966 0.969456 0.888482 0.477463 0.046584
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at LER_SD 17 0.951646 0.814595 0.704700 0.656147 0.940981 1.482023 1.309570 0.815624 0.750691 0.685248 1.020383 1.524984 1.295054 11.264413 0.206970
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at LER_SD 18 0.776674 0.869927 0.980110 0.967794 0.856628 1.105886 1.161881 0.893129 1.072359 1.031714 0.854954 1.063155 1.142463 13.450053 0.032744
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at LER_SD 5 0.711437 1.028358 0.920100 1.051784 1.052212 0.912544 0.963337 1.074562 0.965505 1.120109 1.023005 0.870527 1.017958 0.245353 0.021199
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at LER_SD 6 0.911951 0.995960 1.051287 1.153123 0.966979 0.848063 0.944349 1.080064 1.063283 1.045553 0.957516 0.873322 1.020501 13.537589 0.049182
TAIR:ATMG00150 - - - - TAIR9 244949_at LER_SD 22 0.505697 1.085161 0.922486 0.964468 0.978673 0.921271 1.091239 0.982049 1.007007 1.023181 1.063562 0.963060 0.997841 16.241611 0.009141
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at LER_SD 20 0.849913 0.936383 1.043162 0.657693 1.117552 1.196436 0.952913 1.020298 1.125101 0.652310 1.050789 1.277997 0.969366 0.280940 0.066463
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at LER_SD 16 0.810875 0.698418 0.943537 0.794273 1.317516 1.023882 1.242324 0.725127 0.980184 0.811014 1.294645 0.931476 1.237605 9.043677 0.091457
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at LER_SD 2 0.657472 0.837536 1.170553 1.065376 0.859624 0.891861 1.227267 0.887182 1.059337 1.094872 0.885583 0.829667 1.191143 20.056625 0.035213
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at LER_SD 14 0.902133 0.962991 0.940632 0.822829 1.193597 1.229845 0.953541 1.004858 0.853697 0.762974 1.144169 1.202557 0.928309 9.748717 0.081097
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at LER_SD 15 0.766427 0.879857 0.963524 0.955103 1.134504 0.987926 1.102410 0.798252 0.946513 0.934766 1.239762 0.995946 1.061437 4.212766 0.055656
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at LER_SD 11 0.927008 0.973075 0.819557 1.007682 1.321772 0.935927 0.886032 1.049494 0.793200 1.095110 1.397774 0.870246 0.850129 5.418065 0.082371
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at LER_SD 14 0.917946 0.915116 0.938347 0.994653 1.066107 1.098847 1.017938 0.877589 0.981445 1.079331 1.066918 1.003162 0.960547 5.406175 0.040419
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at LER_SD 0 0.782125 1.085244 0.929436 1.081267 0.982142 0.951031 0.967884 1.172558 0.945361 1.023217 0.982935 0.968343 0.910582 20.996413 0.018535
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at LER_SD 16 0.762453 1.054225 0.889314 1.022438 1.037851 1.031465 1.021237 1.069461 0.942563 0.991142 1.004589 0.955315 0.980399 11.932848 0.010319
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at LER_SD 13 0.785282 0.942577 1.051137 0.671184 1.259442 1.151724 0.895478 0.994569 1.042843 0.677181 1.338008 1.078697 0.897161 8.986859 0.059474
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at LER_SD 8 0.730342 1.072794 1.022094 1.111153 0.893410 0.968282 0.954966 1.025463 0.923823 1.116191 0.933203 1.011202 0.967417 13.569181 0.021364
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at LER_SD 17 0.825128 0.856894 1.091220 0.823150 0.892355 1.294517 1.062329 0.841215 1.054837 0.830211 0.958185 1.201035 1.094049 11.609871 0.061847
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at LER_SD 19 0.910704 1.038451 0.934376 0.815890 1.032762 1.104987 1.141156 0.968016 0.919185 0.743169 1.059056 1.122559 1.120393 23.677487 0.077966
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at LER_SD 19 0.819326 1.061692 1.000263 0.862773 0.999966 1.061028 1.084742 1.162582 0.917217 0.834907 1.057811 0.955151 1.001867 14.428224 0.043735
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at LER_SD 18 0.619492 1.045475 0.969566 0.864713 1.092422 0.919711 1.097769 1.110930 0.892362 0.892280 1.185953 0.856123 1.072696 13.617758 0.025916
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at LER_SD 22 0.956701 1.107473 1.029495 0.842489 0.794982 1.092385 1.117098 1.116882 1.058332 0.857083 0.762677 1.166571 1.054534 15.714649 0.082413
TAIR:ATCG00600 - - - - TAIR9 244966_at LER_SD 15 0.953431 0.958995 0.839966 0.755527 0.995017 1.459913 0.910191 0.974477 0.768991 0.803957 1.052078 1.543814 0.937074 10.360022 0.133549
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at LER_SD 17 0.768469 0.893824 1.081752 0.914001 0.837703 1.156702 1.041731 0.941949 1.097627 0.950939 0.852941 1.240171 0.990661 13.320876 0.029529
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at LER_SD 15 0.804592 0.965875 0.846964 1.043049 0.964280 1.134744 1.046146 0.969216 0.827979 1.139943 0.965277 1.118786 0.977741 8.999857 0.042815
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at LER_SD 0 0.924734 1.030667 0.983240 1.113352 0.737856 1.152071 1.041387 1.025647 1.029424 1.047245 0.697289 1.144373 0.997449 19.235948 0.036775
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at LER_SD 21 0.902861 1.619888 0.753062 0.649182 0.706722 1.140216 1.119235 1.492309 0.823066 0.664801 0.773226 1.123516 1.134778 15.418973 0.187807
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at LER_SD 19 0.938709 1.038983 0.973874 0.833143 1.001070 1.079608 1.100346 1.015737 0.881010 0.908691 0.960487 1.040735 1.166317 13.202376 0.059981
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at LER_SD 3 0.724098 1.051073 1.377088 0.687626 1.121660 1.002180 0.660666 1.098348 1.412099 0.648481 1.219466 1.035908 0.685404 22.907094 0.055753
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at LER_SD 20 0.846027 1.038942 1.264282 0.483425 1.104718 1.194833 0.839986 1.035904 1.376295 0.481783 1.091571 1.218993 0.869268 14.606065 0.048100
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at LER_SD 12 0.709673 0.766518 1.243657 0.808814 1.368037 0.960202 0.793383 0.793565 1.342617 0.764946 1.455478 0.925206 0.777579 8.245405 0.091571
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at LER_SD 8 0.762316 0.905344 1.160342 0.939458 1.142307 0.955873 0.866125 0.976679 1.116225 1.006987 1.097039 0.975155 0.858466 2.067985 0.047781
TAIR:ATCG00720 - - - - PPDB 244976_at LER_SD 9 0.854440 0.996306 0.993278 1.085110 1.039434 0.971114 0.903787 0.965633 1.077028 1.001761 1.074492 1.034456 0.857600 2.658663 0.036698
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at LER_SD 22 0.844720 1.126532 1.021125 0.773762 0.806976 1.192099 1.037882 1.079769 1.065375 0.801148 0.859823 1.292957 0.942552 21.470297 0.073586
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at LER_SD 23 0.878992 1.084546 1.063097 0.839974 0.916796 1.025847 1.113157 1.038622 1.108408 0.763173 0.895898 0.949311 1.201171 15.982706 0.073732
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at LER_SD 0 0.952791 1.283981 0.953992 0.919828 0.839244 1.003963 0.934284 1.350904 0.892581 0.960045 0.917224 0.937699 1.006254 17.406557 0.072642
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at LER_SD 1 0.860401 1.233604 1.121017 1.103181 0.738469 0.933835 0.949532 1.306773 1.059493 1.026236 0.667460 0.962659 0.897741 19.557120 0.103061
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at LER_SD 20 0.856447 1.084356 0.800304 0.960041 0.833780 1.317748 1.024881 1.095362 0.809762 0.883092 0.754783 1.330616 1.105275 12.708978 0.097318
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at LER_SD 0 0.750881 1.121520 1.017048 1.049502 0.759340 1.197462 0.925297 1.060323 0.916836 1.065175 0.829461 1.113770 0.944265 19.474357 0.025349
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at LER_SD 17 0.833963 1.026777 1.068320 0.764464 0.822579 1.281022 1.069993 0.955460 1.047155 0.822339 0.764397 1.373703 1.003791 13.503662 0.080196
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at LER_SD 4 0.728201 1.021339 1.055186 1.256266 0.730402 1.100586 0.847868 1.073806 1.136673 1.201275 0.743619 1.036967 0.796014 22.812828 0.065792
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at LER_SD 0 0.694273 0.941473 1.023333 1.375227 0.606857 1.292914 0.897909 0.935761 0.937438 1.242912 0.650025 1.269092 0.827059 1.776299 0.023572
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at LER_SD 0 0.769274 0.986018 0.994773 0.989627 0.886601 1.053714 1.051515 1.006175 0.951995 1.024185 0.852993 1.051191 1.151213 21.218562 0.033557
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at LER_SD 20 0.880357 1.090582 0.895664 0.898404 0.926633 1.099546 1.033879 1.180828 0.872400 0.838475 0.996562 1.137211 1.029818 13.461562 0.061886
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at LER_SD 18 0.910029 1.043335 0.905712 0.872351 0.943250 1.126926 1.103399 1.020267 0.906985 0.846825 1.001323 1.235190 0.994435 12.159819 0.067037
TAIR:ATCG01280 - - - - TAIR9 244989_s_at LER_SD 0 0.686052 1.021262 1.032900 1.017490 0.851692 1.064764 0.981827 0.921590 1.111355 1.090901 0.929041 1.008861 0.968316 21.944538 0.019236
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at LER_SD 0 0.847049 1.981207 0.854827 0.446638 0.589640 1.318114 0.964384 1.833129 0.832466 0.466100 0.633254 1.193281 0.886960 19.997106 0.254759
* Row count is limited to 100.