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DIURNAL normalized gene expression + PLACE promoter motif

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Normalized Expression Data of DIURNAL circadian conditions, combined with PLACE (Plant Cis-acting Regulatory DNA Elements) motif database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_phyB9_SD_normalize
#download_from http://linkdata.org/work/rdf1s747i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:phyB9_SD_normalize_0_hours label:phyB9_SD_normalize_4_hours label:phyB9_SD_normalize_8_hours label:phyB9_SD_normalize_12_hours label:phyB9_SD_normalize_16_hours label:phyB9_SD_normalize_20_hours label:phyB9_SD_normalize_24_hours label:phyB9_SD_normalize_28_hours label:phyB9_SD_normalize_32_hours label:phyB9_SD_normalize_36_hours label:phyB9_SD_normalize_40_hours label:phyB9_SD_normalize_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at phyB9_SD 18 0.851826 0.992078 1.043812 0.928133 0.760187 1.138094 1.130492 0.916827 0.966649 0.900571 0.817256 1.184673 1.221228 14.074992 0.070422
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at phyB9_SD 19 0.934394 0.915455 0.848844 0.850493 0.977532 1.073972 1.237216 0.992482 0.932839 0.834895 0.959192 1.057909 1.319169 12.823520 0.090221
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at phyB9_SD 15 0.730468 1.001685 0.874138 0.938298 1.055883 1.114586 0.953626 1.055494 0.936134 1.026696 1.019220 1.081440 0.942800 9.217326 0.030678
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at phyB9_SD 14 0.842690 0.866376 0.869659 1.005383 1.138557 1.063462 1.097917 0.858952 0.949897 1.019942 1.127566 0.964981 1.037308 4.328964 0.054305
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at phyB9_SD 5 0.888673 0.952538 1.288644 1.076730 0.906766 0.872617 0.982371 0.989849 1.175964 1.136460 0.852868 0.820902 0.944290 22.340430 0.084145
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at phyB9_SD 3 0.662246 0.867178 1.154918 1.009883 0.961388 0.818984 1.063106 0.908050 1.145983 1.069479 1.006379 0.864339 1.130313 22.555235 0.039102
TAIR:ATMG00710 - - - - TAIR9 244907_at phyB9_SD 20 0.906910 1.017397 1.008995 0.732607 1.047817 1.020098 1.122377 1.013459 1.069132 0.763295 0.977090 1.049131 1.178602 14.061111 0.066975
TAIR:ATMG00720 - - - - TAIR9 244908_at phyB9_SD 20 0.867757 1.100073 1.120242 0.816242 1.006603 1.005274 0.970982 1.101753 1.084128 0.737626 1.105594 0.996241 0.955240 16.582516 0.033732
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at phyB9_SD 0 0.702535 1.158682 0.996051 1.003765 0.934523 1.076975 0.947696 1.068488 0.973821 0.965381 0.948901 1.042337 0.883381 17.812059 0.016686
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at phyB9_SD 1 0.932636 1.112177 1.114705 0.950124 0.846750 0.999064 0.969815 1.187480 1.096556 0.925089 0.846789 0.920271 1.031180 17.332503 0.068965
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at phyB9_SD 3 0.775002 0.880721 1.404863 1.018666 0.919032 0.586021 1.281696 0.908867 1.296650 0.974838 0.867976 0.641772 1.218898 20.675484 0.108231
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at phyB9_SD 1 0.882173 1.136738 1.027940 0.902863 1.047154 0.961210 0.971692 1.133557 1.033713 0.903685 0.946051 0.965554 0.969843 17.999204 0.034336
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at phyB9_SD 12 0.724167 0.848248 1.044166 0.976633 0.981561 0.985556 1.075349 0.840046 1.146514 1.022276 0.889834 1.065639 1.124178 11.076807 0.004544
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at phyB9_SD 16 0.831052 0.886631 0.873510 0.935209 1.180296 0.980394 1.151414 0.938947 0.866093 0.841795 1.262490 1.020061 1.063160 9.255686 0.066954
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at phyB9_SD 4 0.692223 0.854157 1.300419 0.946939 1.107028 0.800474 0.987600 0.910247 1.179290 0.929943 1.163889 0.779189 1.040824 23.886424 0.054043
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at phyB9_SD 12 0.813850 0.977819 0.998739 0.930063 1.219080 0.842463 1.039322 0.882294 1.034833 0.950558 1.303451 0.765702 1.055675 7.872184 0.032353
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at phyB9_SD 8 0.604584 0.880324 0.966589 1.148413 0.808859 1.154287 0.962280 0.861559 0.950450 1.231179 0.825710 1.174922 1.035429 6.344869 0.024242
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at phyB9_SD 12 0.766166 0.830732 1.030260 0.942220 1.247139 0.992780 0.995527 0.899819 1.077200 0.861145 1.147978 0.924216 1.050984 6.387863 0.037506
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at phyB9_SD 12 0.702297 0.901896 1.093143 0.866205 1.144944 0.962442 1.009371 0.860135 1.017561 0.927813 1.178162 0.945914 1.092414 7.107444 0.026612
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at phyB9_SD 4 0.862877 0.838496 1.325427 0.976754 1.030844 0.780971 1.065724 0.853075 1.428258 0.947163 0.942256 0.758869 1.052164 22.296133 0.081586
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at phyB9_SD 9 0.816636 0.851402 1.105369 1.286301 0.936852 1.079065 0.874836 0.794388 1.012728 1.213309 1.009878 1.045887 0.789985 3.012608 0.084781
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at phyB9_SD 23 0.900204 1.267750 0.973708 0.968503 0.832231 0.835772 1.081729 1.269384 1.038275 0.976829 0.899907 0.875552 0.980361 18.595249 0.085512
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at phyB9_SD 13 0.929094 0.782225 0.806881 0.984672 1.398563 1.043834 0.996382 0.767706 0.796125 0.975877 1.266340 1.141240 1.040155 7.507723 0.123498
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at phyB9_SD 18 0.871359 1.048496 0.896546 0.896766 1.039522 1.048364 1.118529 1.135719 0.888731 0.897041 0.959780 1.048257 1.022251 13.304985 0.050424
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at phyB9_SD 20 0.732634 0.960992 1.236259 0.821699 1.002578 1.069533 1.029161 0.925225 1.121090 0.806724 1.040806 0.984525 1.001409 16.423788 0.017789
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at phyB9_SD 22 0.860026 0.994098 1.029885 0.904267 0.960675 1.097119 1.053055 0.991054 1.063674 0.923222 0.884614 1.015835 1.082502 15.004076 0.033457
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at phyB9_SD 20 0.811194 1.186627 0.835373 0.953099 0.787022 1.320342 0.969572 1.156690 0.838534 0.873574 0.822265 1.297467 0.959435 22.728574 0.079890
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at phyB9_SD 8 0.682376 1.031282 1.032092 0.878173 1.029514 1.082360 0.889885 1.059576 1.088639 0.945002 1.117510 0.996502 0.849464 2.354957 0.011118
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at phyB9_SD 12 0.911803 0.753957 1.113791 0.932441 1.044323 1.053406 1.066701 0.682893 1.156478 1.019280 1.100092 1.078255 0.998382 5.856476 0.048499
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at phyB9_SD 17 0.895162 0.668418 0.858709 0.984389 0.914257 1.433435 1.117068 0.733957 0.893463 1.025534 0.829929 1.365079 1.175762 9.856657 0.113305
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at phyB9_SD 16 0.924247 0.798656 0.719554 0.939752 0.955348 1.319059 1.254909 0.819741 0.744395 0.925648 0.999242 1.313382 1.210314 10.529477 0.137696
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at phyB9_SD 16 0.981335 0.662314 0.734547 0.737567 1.299235 1.157164 1.316969 0.676988 0.664979 0.723436 1.368428 1.265649 1.392724 9.886031 0.192737
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at phyB9_SD 15 0.808414 0.989997 0.827269 0.989050 0.959391 1.139015 1.176105 0.955771 0.764868 1.083322 0.934900 1.047570 1.132742 11.330115 0.060901
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at phyB9_SD 18 0.950296 0.909412 0.989480 0.896025 0.896434 1.116672 1.200400 0.829058 0.942411 0.872813 0.920991 1.209832 1.216472 12.201828 0.075352
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at phyB9_SD 18 0.978402 0.597877 0.704937 0.756914 0.776051 1.501838 1.645084 0.542185 0.716087 0.780889 0.755643 1.492672 1.729823 0.335145 0.247089
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at phyB9_SD 17 0.948386 1.076383 0.649137 0.902904 1.140361 1.167415 1.055048 1.170502 0.684840 0.889234 1.094629 1.173536 0.996010 10.781358 0.096213
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at phyB9_SD 19 0.860059 1.017100 0.906827 0.656181 1.224081 1.318607 0.987427 0.987017 0.816201 0.605365 1.254185 1.195463 1.031544 1.340549 0.119005
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at phyB9_SD 16 0.971246 0.845865 0.799631 0.816735 1.111025 1.327334 1.075315 0.824468 0.747460 0.835692 1.188354 1.362904 1.065218 9.726495 0.142175
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at phyB9_SD 13 0.788992 1.030945 0.987464 0.855672 1.084555 0.993226 0.959599 0.974593 1.008606 0.926697 1.163016 1.067735 0.947892 8.521986 0.022359
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at phyB9_SD 4 0.524305 1.024247 0.984043 0.954515 1.089725 0.909502 1.011560 1.088342 1.053035 0.929429 0.994453 0.961344 0.999804 17.276129 0.014869
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at phyB9_SD 15 0.963317 0.592793 0.761425 0.752009 1.118639 1.732447 0.964897 0.593363 0.806190 0.802252 1.131385 1.831142 0.913458 9.106902 0.230433
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at phyB9_SD 18 0.654794 0.962691 0.984593 1.007817 0.916448 1.066293 1.024469 0.961993 1.043160 0.988852 0.982252 1.008800 1.052632 13.401658 0.009879
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at phyB9_SD 11 0.851261 0.863008 1.021324 0.981211 1.119438 1.019630 0.926847 0.884575 1.091922 1.034718 1.076687 1.008228 0.972413 7.377028 0.041339
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at phyB9_SD 20 0.894247 1.022861 1.025486 0.855030 1.122294 1.046746 1.008427 0.991083 1.050615 0.823482 1.047197 1.035763 0.971016 0.118879 0.022191
TAIR:ATMG00150 - - - - TAIR9 244949_at phyB9_SD 14 0.783166 0.924586 0.874491 1.058289 0.948791 1.025961 1.109258 0.894932 0.919059 1.162526 0.983562 1.083436 1.015110 8.052051 0.030940
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at phyB9_SD 11 0.962066 0.837695 1.014125 1.093626 1.253053 1.006681 0.820411 0.836957 0.974302 1.186166 1.204463 0.931432 0.841090 4.100624 0.101155
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at phyB9_SD 18 0.938708 0.653477 0.886331 0.887408 0.767243 1.375068 1.281729 0.698556 0.925528 0.947968 0.691671 1.497034 1.387988 11.491259 0.137952
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at phyB9_SD 8 0.714609 1.166382 0.917450 0.924124 1.157085 1.008002 0.810092 1.227712 0.994193 0.958228 1.044969 1.027868 0.763896 11.423436 0.013442
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at phyB9_SD 22 0.952565 1.081329 1.021998 0.906084 0.818199 0.981370 1.124516 1.106560 1.009610 0.899978 0.832986 1.078987 1.138384 16.049642 0.071709
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at phyB9_SD 16 0.929391 0.929316 0.847770 0.913407 1.079082 1.165210 1.055733 0.912177 0.907550 1.000852 0.978421 1.181515 1.028966 9.808035 0.065469
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at phyB9_SD 18 0.738776 1.099723 0.953816 0.945845 0.979081 1.099077 0.995061 0.997978 0.975673 0.855550 1.058014 1.115717 0.924465 11.749113 0.029178
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at phyB9_SD 4 0.735792 0.910443 1.232927 0.799399 0.939642 0.934513 1.124894 0.967711 1.207477 0.869900 0.890370 0.996782 1.125942 18.402224 0.049731
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at phyB9_SD 4 0.848314 1.038770 1.054335 0.927957 1.161878 0.732389 1.020991 1.132318 0.971055 0.995383 1.167192 0.765322 1.032410 22.240426 0.032035
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at phyB9_SD 11 0.829586 0.977473 0.779335 1.021723 1.259557 0.946743 1.028745 0.996813 0.856879 1.115834 1.172197 0.862928 0.981774 6.252304 0.050753
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at phyB9_SD 9 0.895010 0.859110 1.079184 1.045789 1.233512 0.875787 0.904235 0.872771 1.084671 1.040951 1.248407 0.914922 0.840660 3.324268 0.080049
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at phyB9_SD 14 0.697299 1.025423 0.965443 0.888588 1.158784 1.078594 0.872383 1.090988 0.985294 0.898073 1.059762 1.047675 0.928992 8.804563 0.020492
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at phyB9_SD 12 0.855886 0.995225 0.969026 0.944105 1.076597 0.989421 0.924177 0.965756 0.984367 1.036257 1.165250 0.994582 0.955238 6.664432 0.029330
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at phyB9_SD 18 0.803300 0.887887 0.918409 1.042831 0.894320 1.101137 1.082555 0.956635 1.008265 1.021664 0.863752 1.132321 1.090223 11.864044 0.029974
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at phyB9_SD 19 0.821962 1.030537 0.971639 0.894577 1.031830 1.021165 1.020460 1.029209 0.997170 0.812035 1.134074 0.947170 1.110133 13.075324 0.031816
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at phyB9_SD 16 0.877339 0.856851 0.951559 0.899992 1.032416 1.078614 1.125346 0.918497 0.935567 0.851360 1.085690 1.037428 1.226679 11.178817 0.061281
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at phyB9_SD 16 0.934890 0.905495 0.786732 0.857529 1.058075 1.282279 1.040370 0.871881 0.823864 0.797551 1.139800 1.397864 1.038559 10.007431 0.124310
TAIR:ATCG00600 - - - - TAIR9 244966_at phyB9_SD 13 0.892022 0.439918 0.976581 0.953671 1.181073 1.404440 1.054785 0.404068 0.890735 0.935483 1.235093 1.387247 1.136905 7.962249 0.180182
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at phyB9_SD 11 0.931687 0.836399 0.952863 1.108416 1.058112 1.079093 0.901530 0.798819 0.996480 1.087344 1.136094 1.141702 0.903147 5.557473 0.074689
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at phyB9_SD 13 0.970765 0.772587 0.886129 1.061309 1.201643 1.090752 0.989309 0.779226 0.846268 0.956714 1.277933 1.146760 0.991368 7.244561 0.105465
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at phyB9_SD 13 0.880566 0.925234 0.846867 0.970814 1.281149 1.054308 1.010014 0.852016 0.904474 0.876179 1.252410 0.957488 1.069048 7.931218 0.073390
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at phyB9_SD 20 0.769787 1.271248 0.728863 1.023696 0.431518 1.390408 0.984261 1.365234 0.781437 1.059215 0.435525 1.447513 1.081081 14.935481 0.131504
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at phyB9_SD 20 0.621626 0.969531 0.921793 1.043443 1.075531 0.930927 1.112478 0.922896 0.937818 1.119109 0.980733 0.841373 1.144369 5.684431 0.006107
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at phyB9_SD 12 0.916095 0.281492 1.227295 1.021134 0.987143 1.438764 1.113997 0.301886 1.233095 1.086193 0.904244 1.303644 1.101113 6.906825 0.119616
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at phyB9_SD 21 0.898206 1.071225 1.120802 0.686433 0.899886 1.268057 1.027992 1.172253 1.067392 0.655285 0.820795 1.208846 1.001033 14.700472 0.092642
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at phyB9_SD 11 0.939183 0.718900 1.067236 1.047018 1.292224 1.116452 0.823592 0.658742 1.029387 1.076148 1.328188 1.023220 0.818892 5.057465 0.129303
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at phyB9_SD 11 0.958321 0.632133 1.110331 1.066511 1.129000 1.144444 0.930207 0.693929 1.038572 1.139238 1.186867 1.083064 0.845704 5.084013 0.106723
TAIR:ATCG00720 - - - - PPDB 244976_at phyB9_SD 11 0.796789 0.878938 1.076203 1.065294 1.003276 1.044589 1.007280 0.889904 1.056921 1.065496 0.929754 1.072378 0.909966 8.474362 0.027472
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at phyB9_SD 13 0.950211 0.740327 0.997055 1.055892 1.143835 1.038298 1.080457 0.685592 0.997296 1.046388 1.102063 1.121492 0.991304 6.483594 0.077114
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at phyB9_SD 21 0.977048 1.188849 0.905767 0.869711 0.831823 1.054334 1.186016 1.138412 0.940486 0.811244 0.894739 1.012225 1.166394 15.128951 0.094250
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at phyB9_SD 19 0.969020 1.017680 0.786355 0.831712 0.977635 1.117279 1.249592 1.093669 0.777038 0.781276 0.958449 1.219952 1.189363 12.551206 0.116669
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at phyB9_SD 19 0.864671 1.005839 0.982908 0.751499 0.961301 1.120638 1.216613 0.913068 1.029504 0.758825 0.902779 1.207308 1.149716 13.184332 0.088782
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at phyB9_SD 18 0.962704 0.785013 0.694485 0.731134 0.962329 1.326121 1.386687 0.839640 0.762671 0.759418 0.933208 1.427318 1.391976 11.533065 0.187915
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at phyB9_SD 18 0.958612 0.831049 0.698994 0.694372 0.897440 1.516649 1.434310 0.889020 0.680760 0.762321 0.900062 1.396139 1.298883 0.322160 0.203484
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at phyB9_SD 17 0.963277 0.842567 0.761493 0.812457 1.017185 1.281262 1.278039 0.808233 0.738487 0.731365 1.031802 1.292973 1.404137 11.278831 0.162570
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at phyB9_SD 14 0.954627 0.868642 0.905739 0.957780 1.172867 1.204951 0.960655 0.832313 0.861756 0.927256 1.253433 1.141273 0.913336 7.715230 0.094376
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at phyB9_SD 15 0.979984 0.762136 0.807783 0.922776 1.261960 1.216415 1.083951 0.805547 0.808318 0.886389 1.235092 1.203391 1.006241 8.551437 0.126389
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at phyB9_SD 18 0.943064 1.028437 0.804148 0.848533 1.104923 1.114670 1.177443 1.012276 0.779500 0.875907 1.009834 1.132175 1.112155 11.560074 0.089240
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at phyB9_SD 18 0.929909 1.004874 0.827353 0.850231 1.093733 1.092808 1.086684 1.014892 0.909787 0.851135 0.994938 1.179507 1.094059 11.580846 0.073662
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at phyB9_SD 17 0.884914 0.879927 0.912605 0.835097 1.068656 1.133542 1.262464 0.808670 0.967527 0.789933 1.048778 1.077046 1.215755 11.381417 0.086555
TAIR:ATCG01280 - - - - TAIR9 244989_s_at phyB9_SD 22 0.825259 1.130201 0.972164 0.820890 0.962754 0.914155 1.209369 1.079529 0.902200 0.882389 1.056070 0.977178 1.093101 14.806123 0.059924
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at phyB9_SD 0 0.652282 1.271109 0.970651 0.904970 1.260831 0.779823 0.874265 1.249443 0.913487 0.882223 1.187782 0.806946 0.898470 21.445600 0.028682
* Row count is limited to 100.