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Codon Usage
Koro_Nishikata
makita
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CodonUsage_Arabidopsis
CodonUsage_Tomato
Select a file name to see the detais.
Show API List
#LINK
#lang
en
#attribution_name
GenoCon_2
#license
http://creativecommons.org/publicdomain/zero/1.0/deed.en
#file_name
CodonUsage_Arabidopsis
#download_from
http://linkdata.org/work/rdf1s360i
#namespace
Taxonomy
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=
#namespace
Wikipedia
http://en.wikipedia.org/wiki/
#property
amino acid
usage
one-letter code for amino acid
species
#object_type_xsd
string
float
string
string
#property_context
Assertion
Assertion
Assertion
Assertion
GCT
Wikipedia:Alanine
0.4306
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GCC
Wikipedia:Alanine
0.1550
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GCA
Wikipedia:Alanine
0.2774
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GCG
Wikipedia:Alanine
0.1369
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TGT
Wikipedia:Cysteine
0.5995
C
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TGC
Wikipedia:Cysteine
0.4005
C
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GAT
Wikipedia:Glutamic_acid
0.6871
E
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GAC
Wikipedia:Glutamic_acid
0.3129
E
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GAA
Wikipedia:Aspartic_acid
0.5242
D
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GAG
Wikipedia:Aspartic_acid
0.4758
D
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TTT
Wikipedia:Glycine
0.5248
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TTC
Wikipedia:Glycine
0.4752
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GGT
Wikipedia:Glycine
0.3340
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GGC
Wikipedia:Glycine
0.1389
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GGA
Wikipedia:Phenylalanine
0.3681
F
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GGG
Wikipedia:Phenylalanine
0.1589
F
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CAT
Wikipedia:Isoleucine
0.6240
I
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CAC
Wikipedia:Isoleucine
0.3760
I
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ATT
Wikipedia:Isoleucine
0.4090
I
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ATC
Wikipedia:Histidine
0.3407
H
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ATA
Wikipedia:Histidine
0.2503
H
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AAA
Wikipedia:Lysine
0.4951
K
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AAG
Wikipedia:Lysine
0.5049
K
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TTA
Wikipedia:Leucine
0.1403
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TTG
Wikipedia:Leucine
0.2252
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CTT
Wikipedia:Leucine
0.2561
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CTC
Wikipedia:Leucine
0.1657
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CTA
Wikipedia:Leucine
0.1080
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CTG
Wikipedia:Leucine
0.1047
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ATG
Wikipedia:Methionine
1.0000
M
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AAT
Wikipedia:Asparagine
0.5283
N
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AAC
Wikipedia:Asparagine
0.4717
N
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CCT
Wikipedia:Glutamine
0.3832
Q
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CCC
Wikipedia:Glutamine
0.1080
Q
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CCA
Wikipedia:Proline
0.3362
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CCG
Wikipedia:Proline
0.1726
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CAA
Wikipedia:Proline
0.5716
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CAG
Wikipedia:Proline
0.4284
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CGT
Wikipedia:Serine
0.1620
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CGC
Wikipedia:Serine
0.0689
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CGA
Wikipedia:Serine
0.1186
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
CGG
Wikipedia:Serine
0.0902
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AGA
Wikipedia:Serine
0.3590
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AGG
Wikipedia:Serine
0.2013
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TCT
Wikipedia:Arginine
0.2808
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TCC
Wikipedia:Arginine
0.1226
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TCA
Wikipedia:Arginine
0.2075
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TCG
Wikipedia:Arginine
0.1025
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AGT
Wikipedia:Arginine
0.1606
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
AGC
Wikipedia:Arginine
0.1259
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ACT
Wikipedia:Threonine
0.3394
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ACC
Wikipedia:Threonine
0.1964
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ACA
Wikipedia:Threonine
0.3143
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
ACG
Wikipedia:Threonine
0.1499
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GTT
Wikipedia:Tryptophan
0.4038
W
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GTC
Wikipedia:Valine
0.1853
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GTA
Wikipedia:Valine
0.1543
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
GTG
Wikipedia:Valine
0.2566
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TGG
Wikipedia:Valine
1.0000
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TAT
Wikipedia:Tyrosine
0.5298
Y
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TAC
Wikipedia:Tyrosine
0.4702
Y
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TAA
Wikipedia:Stop_codon
0.3622
*
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TAG
Wikipedia:Stop_codon
0.2057
*
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
TGA
Wikipedia:Stop_codon
0.4321
*
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Arabidopsis%20thaliana
* Row count is limited to 100.
Koro_Nishikata
makita
