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Mammalian PromoterCAD template files for adding regulatory motif data

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These template files are useful if you would like to add new data to PromoterCAD, such as for a new organisms, experimental measurements, or motif identification methods.

Tutorial Page:
Advanced Tutorial 2B: add a new motif database to PromoterCAD
Mammalian PromoterCAD:
http://promotercad.org/mammal
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/licenses/by/3.0/deed.en
#file_name MammalianPromoterCAD_GeneAtlas_Trunk_Abdomen_organ_Template
#download_from http://linkdata.org/work/rdf1s1067i
#namespace Gene http://www.ncbi.nlm.nih.gov/gene/
#property motif motif name motif sequence motif position Probe ID label:kidney label:liver label:pancreas
#object_type_xsd string string string float string float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
Gene:54161 1415670_at 1153.13886 1674.56862 1690.06908
Gene:11972 1415671_at 3629.03748 2933.4445 3970.36637
Gene:57437 1415672_at 2976.90584 3715.12041 2822.03855
Gene:100678 1415673_at 384.10765 235.95654 456.23821
Gene:60409 1415674_a_at 807.73483 594.83116 336.50391
Gene:13481 1415675_at 242.86744 277.89828 250.92711
Gene:19173 1415676_a_at 3560.56678 3217.49707 1598.96952
Gene:52585 1415677_at 2346.04121 3544.18562 1315.29011
Gene:19042 1415678_at 1291.99897 1983.90509 1361.72503
Gene:66340 1415679_at 3266.63974 3059.97385 3559.29449
Gene:17222 1415680_at 281.16455 326.41882 316.74186
Gene:94067 1415681_at 1098.41903 1066.85321 806.84095
Gene:65246 1415682_at 336.0151 365.11912 170.0199
Gene:18107 1415683_at 2146.26179 2040.73484 1274.09873
Gene:11793 1415684_at 618.94715 1516.84939 227.80693
Gene:76784 1415685_at 400.25405 878.47811 423.6546
Gene:68365 1415686_at 1579.52502 1785.90504 664.03298
Gene:19156 1415687_a_at 20614.10643 6274.45828 2954.63239
Gene:67128 1415688_at 1190.73059 1587.31739 1827.66793
Gene:72739 1415689_s_at 678.04138 902.13678 405.21976
Gene:94064 1415690_at 3795.61665 3430.53911 1266.44631
Gene:13383 1415691_at 793.87431 752.46695 1489.00124
Gene:12330 1415692_s_at 10973.65246 10906.6092 7252.5579
Gene:67819 1415693_at 417.98657 562.43574 199.96223
Gene:22375 1415694_at 72.61408 38.74633 1654.71117
Gene:26440 1415695_at 4458.55072 6050.82456 1159.05803
Gene:20224 1415696_at 895.08024 947.50783 1343.24214
Gene:23881 1415697_at 424.9148 407.51271 299.21337
Gene:105348 1415698_at 101.88111 26.0743 43.6507
Gene:209318 1415699_a_at 1228.67383 1161.27415 1301.44533
Gene:67437 1415700_a_at 4456.24308 6854.17775 5869.432
Gene:65019 1415701_x_at 22496.72904 20153.11833 39324.3706
Gene:13016 1415702_a_at 2028.20876 691.73397 2493.39833
Gene:59026 1415703_at 1568.02223 1029.22464 440.00623
Gene:321022 1415704_a_at 1484.25907 2623.42527 4001.68826
Gene:66818 1415705_at 271.27144 257.74657 341.70513
Gene:12847 1415706_at 5153.26603 3834.74727 4551.26145
Gene:99152 1415707_at 601.84505 613.15345 552.51752
Gene:544752 1415708_at 1371.6011 604.5904 803.47975
Gene:107338 1415709_s_at 314.96533 510.63102 428.329
Gene:231430 1415710_at 364.95053 780.36184 293.6303
Gene:211673 1415711_at 1508.50934 845.37748 1452.79951
Gene:360216 1415712_at 258.98085 629.56736 135.57596
Gene:27225 1415713_a_at 340.5363 321.57314 199.09806
Gene:66618 1415714_a_at 693.45561 467.60823 352.82688
Gene:68366 1415715_at 161.05463 191.73676 152.47642
Gene:100043813 1415716_a_at 13181.41765 9772.17657 22576.97977
Gene:57294 1415716_a_at 13181.41765 9772.17657 22576.97977
Gene:66743 1415717_at 216.61322 197.98299 231.2193
Gene:50724 1415718_at 875.72777 790.11936 773.25935
Gene:74252 1415719_s_at 821.21904 767.40137 245.01487
Gene:66591 1415720_s_at 66.04086 78.73091 59.92967
Gene:74763 1415721_a_at 457.64298 1046.53245 202.65461
Gene:66201 1415722_a_at 491.34995 351.9987 257.90083
Gene:217869 1415723_at 2623.46394 2980.57456 4888.88756
Gene:12540 1415724_a_at 3422.56307 2414.90855 1872.05505
Gene:106298 1415725_at 100.06674 148.98644 247.11236
Gene:81702 1415726_at 695.21298 515.29628 553.06006
Gene:246703 1415727_at 2652.07788 2071.75947 1258.4832
Gene:54196 1415728_at 173.37808 211.79013 73.06436
Gene:18607 1415729_at 520.2655 358.99939 701.38982
Gene:269061 1415730_at 586.37337 396.03465 401.30718
Gene:52477 1415731_at 71.84938 53.03472 68.82585
Gene:193742 1415732_at 413.03872 280.59545 200.97123
Gene:68512 1415733_a_at 1398.09109 565.01922 1160.86261
Gene:19349 1415734_at 4946.41936 2801.09667 2633.26669
Gene:13194 1415735_at 1556.26973 1214.43007 662.98828
Gene:56612 1415736_at 3206.83537 2513.95107 4962.69561
Gene:54391 1415737_at 1397.88487 860.04104 876.4967
Gene:66073 1415738_at 558.58454 700.18372 215.9861
Gene:68035 1415739_at 872.63597 697.92371 455.36097
Gene:19184 1415740_at 1608.97702 1831.19419 1073.25845
Gene:21982 1415741_at 841.9739 422.25516 1381.75695
Gene:11993 1415742_at 1143.0661 1311.41049 967.14303
Gene:15184 1415743_at 134.72658 131.45117 102.32118
Gene:14976 1415744_at 910.37073 1215.45756 898.89107
Gene:13185 1415745_a_at 259.4972 272.08117 121.60882
Gene:71722 1415746_at 157.80272 89.51716 140.18566
Gene:66878 1415747_s_at 1602.83212 1719.32269 2845.85329
Gene:59288 1415748_a_at 745.7004 369.30819 414.7295
Gene:54170 1415749_a_at 1451.31907 1067.34187 1012.88636
Gene:213773 1415750_at 111.68132 107.1109 154.8414
Gene:15441 1415751_at 1210.17305 1339.98678 1615.75595
Gene:407819 1415752_at 4195.01335 2355.24372 1348.65939
Gene:216169 1415753_at 1469.75171 1446.23525 1851.70288
Gene:69833 1415754_at 1291.67367 914.08615 848.94721
Gene:66589 1415755_a_at 916.96362 571.31458 742.89838
Gene:20615 1415756_a_at 284.37936 255.20116 136.37996
Gene:107338 1415757_at 545.86951 956.68048 584.58015
* Row count is limited to 100.