Contact

Link and Publish your data

to the Linked Open Data Community

Linkdata Work Information

Speedup Lists of Circadian Genomic (DIURNAL + PPDB promoter motif) Gene

Lists for the Diurnal and PPDB mashup data table. For each experiment, the top 1000 and bottom 1000 genes ranked by circadian amplitude. This also includes the full List for MotifQuery function.

References (for PPDB):
http://www.ncbi.nlm.nih.gov/pubmed/17947329
http://www.ncbi.nlm.nih.gov/pubmed/17346352
References (for Diurnal)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PPDB_0to4_top Lists for the DIURNAL and PPDB mashup data table. For each experiment, the top 1000 genes ranked by absolute expression level, for circadian phase range 0 to 4 hr.
DiurnalHours_PPDB_4to8_top Lists for the DIURNAL and PPDB mashup data table. For each experiment, the top 1000 genes ranked by absolute expression level, for circadian phase range 4 to 8 hr.
DiurnalHours_PPDB_8to12_top Lists for the DIURNAL and PPDB mashup data table. For each experiment, the top 1000 genes ranked by absolute expression level, for circadian phase range 8 to 12 hr.
DiurnalHours_PPDB_12to16_top Lists for the DIURNAL and PPDB mashup data table. For each experiment, the top 1000 genes ranked by absolute expression level, for circadian phase range 12 to 16 hr.
DiurnalHours_PPDB_16to20_top Lists for the DIURNAL and PPDB mashup data table. For each experiment, the top 1000 genes ranked by absolute expression level, for circadian phase range 16 to 20 hr.
DiurnalHours_PPDB_20to24_top Lists for the DIURNAL and PPDB mashup data table. For each experiment, the top 1000 genes ranked by absolute expression level, for circadian phase range 20 to 24 hr.
DiurnalHours_PPDB_top Lists for the DIURNAL and PPDB (Plant Promoter Database) mashup data table. For each experiment, the top 1000 genes ranked by absolute expression level.
DiurnalHours_PPDB_bottom Lists for the DIURNAL and PPDB (Plant Promoter Database) mashup data table. For each experiment, the bottom 1000 genes ranked by circadian amplitude.
DiurnalHours_PPDB_all Lists for the DIURNAL and PPDB (Plant Promoter Database) mashup data table. For each experiment, the all genes ranked by circadian amplitude.
60

value

useful
2
Loading...

downloadDownload

File Name
DiurnalHours_PPDB_0to4_top
Table Data (Text)
2013.1.8
299.4KB
Table Data (Excel)
2013.1.8
426.0KB
RDF (Turtle)
2013.1.8
1.8MB
DiurnalHours_PPDB_12to16_top
Table Data (Text)
2013.1.8
299.4KB
Table Data (Excel)
2013.1.8
422.0KB
RDF (Turtle)
2013.1.8
1.9MB
DiurnalHours_PPDB_16to20_top
Table Data (Text)
2013.1.10
295.2KB
Table Data (Excel)
2013.1.10
438.5KB
RDF (Turtle)
2013.1.10
1.9MB
DiurnalHours_PPDB_20to24_top
Table Data (Text)
2013.1.10
299.4KB
Table Data (Excel)
2013.1.10
443.0KB
RDF (Turtle)
2013.1.10
1.9MB
DiurnalHours_PPDB_4to8_top
Table Data (Text)
2013.1.8
299.4KB
Table Data (Excel)
2013.1.8
426.5KB
RDF (Turtle)
2013.1.8
1.8MB
DiurnalHours_PPDB_8to12_top
Table Data (Text)
2013.1.8
299.4KB
Table Data (Excel)
2013.1.8
436.5KB
RDF (Turtle)
2013.1.8
1.9MB
DiurnalHours_PPDB_all
Table Data (Text)
2013.1.12
1.8MB
Table Data (Excel)
2013.1.12
2.2MB
RDF (Turtle)
2013.1.12
12.2MB
DiurnalHours_PPDB_bottom
Table Data (Text)
2013.1.10
183.0KB
Table Data (Excel)
2013.1.10
242.0KB
RDF (Turtle)
2013.1.10
1.2MB
DiurnalHours_PPDB_top
Table Data (Text)
2013.1.10
181.9KB
Table Data (Excel)
2013.1.10
238.5KB
RDF (Turtle)
2013.1.10
1.2MB

↓Click on image to enlarge View LOD cloud (Entire RDF work)

News Feed