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Codon Usage
Koro_Nishikata
makita
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CodonUsage_Arabidopsis
CodonUsage_Tomato
Select a file name to see the detais.
Show API List
#LINK
#lang
en
#attribution_name
GenoCon_2
#license
http://creativecommons.org/publicdomain/zero/1.0/deed.en
#file_name
CodonUsage_Tomato
#download_from
http://linkdata.org/work/rdf1s360i
#namespace
Taxonomy
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=
#namespace
Wikipedia
http://en.wikipedia.org/wiki/
#property
amino acid
usage
one-letter code for amino acid
species
#object_type_xsd
string
float
string
string
#property_context
Assertion
Assertion
Assertion
Assertion
GCT
Wikipedia:Alanine
0.4352
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GCC
Wikipedia:Alanine
0.1397
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GCA
Wikipedia:Alanine
0.3441
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GCG
Wikipedia:Alanine
0.0810
A
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TGT
Wikipedia:Cysteine
0.6342
C
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TGC
Wikipedia:Cysteine
0.3658
C
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GAA
Wikipedia:Glutamic_acid
0.5817
E
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GAG
Wikipedia:Glutamic_acid
0.4183
E
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GAT
Wikipedia:Aspartic_acid
0.7359
D
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GAC
Wikipedia:Aspartic_acid
0.2641
D
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GGT
Wikipedia:Glycine
0.3325
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GGC
Wikipedia:Glycine
0.1394
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GGA
Wikipedia:Glycine
0.3578
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GGG
Wikipedia:Glycine
0.1704
G
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TTT
Wikipedia:Phenylalanine
0.6215
F
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TTC
Wikipedia:Phenylalanine
0.3785
F
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ATT
Wikipedia:Isoleucine
0.4957
I
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ATC
Wikipedia:Isoleucine
0.2280
I
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ATA
Wikipedia:Isoleucine
0.2763
I
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CAT
Wikipedia:Histidine
0.6900
H
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CAC
Wikipedia:Histidine
0.3100
H
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AAA
Wikipedia:Lysine
0.5271
K
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AAG
Wikipedia:Lysine
0.4729
K
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TTA
Wikipedia:Leucine
0.1653
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TTG
Wikipedia:Leucine
0.2522
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CTT
Wikipedia:Leucine
0.2498
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CTC
Wikipedia:Leucine
0.1099
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CTA
Wikipedia:Leucine
0.1118
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CTG
Wikipedia:Leucine
0.1109
L
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ATG
Wikipedia:Methionine
1.0000
M
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AAT
Wikipedia:Asparagine
0.6655
N
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AAC
Wikipedia:Asparagine
0.3345
N
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CAA
Wikipedia:Glutamine
0.6108
Q
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CAG
Wikipedia:Glutamine
0.3892
Q
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CCT
Wikipedia:Proline
0.3939
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CCC
Wikipedia:Proline
0.1208
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CCA
Wikipedia:Proline
0.3866
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CCG
Wikipedia:Proline
0.0988
P
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TCT
Wikipedia:Serine
0.2639
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TCC
Wikipedia:Serine
0.1113
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TCA
Wikipedia:Serine
0.2530
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TCG
Wikipedia:Serine
0.0693
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AGT
Wikipedia:Serine
0.1921
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AGC
Wikipedia:Serine
0.1105
S
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CGT
Wikipedia:Arginine
0.1384
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CGC
Wikipedia:Arginine
0.0677
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CGA
Wikipedia:Arginine
0.1168
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
CGG
Wikipedia:Arginine
0.0727
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AGA
Wikipedia:Arginine
0.3577
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
AGG
Wikipedia:Arginine
0.2467
R
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ACT
Wikipedia:Threonine
0.3820
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ACC
Wikipedia:Threonine
0.1592
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ACA
Wikipedia:Threonine
0.3643
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
ACG
Wikipedia:Threonine
0.0946
T
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TGG
Wikipedia:Tryptophan
1.0000
W
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GTT
Wikipedia:Valine
0.4289
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GTC
Wikipedia:Valine
0.1434
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GTA
Wikipedia:Valine
0.1879
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
GTG
Wikipedia:Valine
0.2398
V
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TAT
Wikipedia:Tyrosine
0.6431
Y
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TAC
Wikipedia:Tyrosine
0.3569
Y
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TAA
Wikipedia:Stop_codon
0.3644
*
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TAG
Wikipedia:Stop_codon
0.2468
*
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
TGA
Wikipedia:Stop_codon
0.3888
*
http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?name=Solanum%20lycopersicum
* Row count is limited to 100.