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Circadian Genomic (DIURNAL + PPDB promoter motif)

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Circadian Data collected over two days (44 hours) at four hour intervals in various growth conditions. We calculated the Phase of each data by non-linear best fit to a sine wave with a 24 hour period, and similarly calculated the Amplitude. Visually checking the 1000 largest amplitude genes showed a good fit in all cases, though a few genes clearly deviated from sinusoidal behavior. All had a major period of 24 hours. For each gene locus, we added the LDSS motifs as calculated by PPDB. Gene Loci without expression data or motif data were removed from this database.

References (for PPDB):
http://www.ncbi.nlm.nih.gov/pubmed/17947329
http://www.ncbi.nlm.nih.gov/pubmed/17346352
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PPDB_COL_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PPDB_COL_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PPDB_DD_DDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PPDB_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PPDB_LDHH_SM
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PPDB_LDHH_ST
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PPDB_LER_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PPDB_LIGHT5_HIF138_13
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PPDB_LIGHT5_HIF138_8
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PPDB_LIGHT5_znknOX
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PPDB_LL12_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PPDB_LL23_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PPDB_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PPDB_LL_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PPDB_LL_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PPDB_lhyox_SD
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PPDB_longday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PPDB_lux_2_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PPDB_phyB9_SD
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PPDB_shortday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.


License

We would like to thank Dr. Yoshiharu Yamamoto for supplying the data of PPDB (Plant Promoter Database) for PromoterCAD & GenoCon2 competition. License of this work's data is according to the intentions of the PPDB original data source.
http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/license.cgi

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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/publicdomain/zero/1.0/deed.en
#file_name DiurnalHours_PPDB_LLHC
#download_from http://linkdata.org/work/rdf1s706i
#namespace Circadian_Condition http://linkdata.org/work/rdf1s290i/Circadian_condition.html#
#namespace Diurnal_Condition http://linkdata.org/work/rdf1s290i/Diurnal_condition.html#
#namespace Gene http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace OctamerElement http://linkdata.org/work/rdf1s329i/Octamer_elements.html#
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#namespace genome_version http://www.arabidopsis.org/portals/genAnnotation/gene_structural_annotation/
#property PPDB motif motif type motif sequence motif position genome_version:annotation_data.jsp TAIR gene chromosome position start position start from TSS peak position end position end from TSS peak strand TSS peak position TSS peak position from Initiation codon Initial codon Probe Condition Phase Correlation label:LLHC_0_hours label:LLHC_4_hours label:LLHC_8_hours label:LLHC_12_hours label:LLHC_16_hours label:LLHC_20_hours label:LLHC_24_hours label:LLHC_28_hours label:LLHC_32_hours label:LLHC_36_hours label:LLHC_40_hours label:LLHC_44_hours Sine Phase Sine Amplitude
#object_type_xsd string:en string:en string:en float string:en string:en string:en integer integer integer integer string:en integer integer integer string string int float float float float float float float float float float float float float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
Gene:AT4G34960 OctamerElement:AtREG549 | OctamerElement:AtREG409 | OctamerElement:AtREG376 | OctamerElement:AtREG378 | OctamerElement:AtREG477 | OctamerElement:AtREG432 REG TAAAAGCC | AAAAGCCC | AAAGCCCA | AAGCCCAT | AGCCCATA | GCCCATAT 117.5 | 116.5 | 115.5 | 114.5 | 113.5 | 112.5 TAIR9 TAIR:At4g34960 Chr4 16648487 | 16648488 | 16648489 | 16648490 | 16648491 | 16648492 -121 | -120 | -119 | -118 | -117 | -116 16648494 | 16648495 | 16648496 | 16648497 | 16648498 | 16648499 -114 | -113 | -112 | -111 | -110 | -109 + 16648608 -257 16648865 253216_at Diurnal_Condition:LLHC 20 0.446359 126.945000 135.228000 136.590000 150.511000 115.264000 187.503000 132.668000 139.011000 125.115000 143.887000 138.543000 123.321000 0.001461 2.070306
Gene:AT4G34960 OctamerElement:AtREG437 | OctamerElement:AtREG490 | OctamerElement:AtREG361 | OctamerElement:AtREG357 | OctamerElement:AtREG558 REG ATGGCCCA | TGGCCCAT | GGCCCATT | GCCCATTA | CCCATTAG 70.5 | 69.5 | 68.5 | 67.5 | 66.5 TAIR9 TAIR:At4g34960 Chr4 16648534 | 16648535 | 16648536 | 16648537 | 16648538 -74 | -73 | -72 | -71 | -70 16648541 | 16648542 | 16648543 | 16648544 | 16648545 -67 | -66 | -65 | -64 | -63 + 16648608 -257 16648865 253216_at Diurnal_Condition:LLHC 20 0.446359 126.945000 135.228000 136.590000 150.511000 115.264000 187.503000 132.668000 139.011000 125.115000 143.887000 138.543000 123.321000 0.001461 2.070306
Gene:AT4G34960 OctamerElement:AtREG430 | OctamerElement:AtREG360 | OctamerElement:AtREG429 | OctamerElement:AtREG401 | OctamerElement:AtREG399 REG TTTAGGCC | TTAGGCCC | AGGCCCGT | GGCCCGTT | GCCCGTTA 52.5 | 51.5 | 49.5 | 48.5 | 47.5 TAIR9 TAIR:At4g34960 Chr4 16648552 | 16648553 | 16648555 | 16648556 | 16648557 -56 | -55 | -53 | -52 | -51 16648559 | 16648560 | 16648562 | 16648563 | 16648564 -49 | -48 | -46 | -45 | -44 + 16648608 -257 16648865 253216_at Diurnal_Condition:LLHC 20 0.446359 126.945000 135.228000 136.590000 150.511000 115.264000 187.503000 132.668000 139.011000 125.115000 143.887000 138.543000 123.321000 0.001461 2.070306
Gene:AT1G10340 OctamerElement:AtREG564 REG GCGTTTTA 181.5 TAIR9 TAIR:At1g10340 Chr1 3392743 185 3392736 178 - 3392558 77 3392481 264434_at Diurnal_Condition:LLHC 5 0.659796 6.342430 7.475860 7.429240 5.976750 6.623660 4.841760 5.961890 7.014650 5.535720 6.149850 5.594570 5.473940 0.009652 0.355183
Gene:AT1G10340 OctamerElement:AtREG631 | OctamerElement:AtREG395 REG CGCGTGAA | GCGCGTGA 207.5 | 208.5 TAIR9 TAIR:At1g10340 Chr1 3392769 | 3392770 211 | 212 3392762 | 3392763 204 | 205 - 3392558 77 3392481 264434_at Diurnal_Condition:LLHC 5 0.659796 6.342430 7.475860 7.429240 5.976750 6.623660 4.841760 5.961890 7.014650 5.535720 6.149850 5.594570 5.473940 0.009652 0.355183
Gene:AT5G23690 OctamerElement:AtREG531 | OctamerElement:AtREG500 REG AAAACGGC | AAACGGCA 86.5 | 85.5 TAIR9 TAIR:At5g23690 Chr5 7987450 | 7987451 -90 | -89 7987457 | 7987458 -83 | -82 + 7987540 -124 7987664 249821_at Diurnal_Condition:LLHC 19 0.738602 6.501980 6.422440 7.576970 9.086100 12.401800 15.415800 11.729200 7.633170 9.557580 8.119970 10.357200 8.293230 0.011359 1.102590
Gene:AT1G11680 OctamerElement:AtREG431 | OctamerElement:AtREG431 | OctamerElement:AtREG493 REG ACGACGTC | GACGTCGT | ACGTCGTT 295.5 | 293.5 | 292.5 TAIR9 TAIR:At1g11680 Chr1 3938283 | 3938285 | 3938286 -299 | -297 | -296 3938290 | 3938292 | 3938293 -292 | -290 | -289 + 3938582 -343 3938925 262820_at Diurnal_Condition:LLHC 6 0.755880 533.422000 771.396000 751.274000 676.310000 633.854000 751.099000 651.579000 739.181000 760.373000 568.565000 612.206000 612.212000 0.019054 29.795469
Gene:AT1G11680 OctamerElement:AtREG646 REG CGTAATTA 257.5 TAIR9 TAIR:At1g11680 Chr1 3938321 -261 3938328 -254 + 3938582 -343 3938925 262820_at Diurnal_Condition:LLHC 6 0.755880 533.422000 771.396000 751.274000 676.310000 633.854000 751.099000 651.579000 739.181000 760.373000 568.565000 612.206000 612.212000 0.019054 29.795469
Gene:AT1G11680 OctamerElement:AtREG497 REG ACGCCGTT 241.5 TAIR9 TAIR:At1g11680 Chr1 3938337 -245 3938344 -238 + 3938582 -343 3938925 262820_at Diurnal_Condition:LLHC 6 0.755880 533.422000 771.396000 751.274000 676.310000 633.854000 751.099000 651.579000 739.181000 760.373000 568.565000 612.206000 612.212000 0.019054 29.795469
Gene:AT1G11680 OctamerElement:AtREG654 REG ATTGCCAC 183.5 TAIR9 TAIR:At1g11680 Chr1 3938395 -187 3938402 -180 + 3938582 -343 3938925 262820_at Diurnal_Condition:LLHC 6 0.755880 533.422000 771.396000 751.274000 676.310000 633.854000 751.099000 651.579000 739.181000 760.373000 568.565000 612.206000 612.212000 0.019054 29.795469
Gene:AT1G09100 OctamerElement:AtREG529 REG GCCCAAAA 54.5 TAIR9 TAIR:At1g09100 Chr1 2939345 58 2939338 51 - 2939287 29 2939258 264657_at Diurnal_Condition:LLHC 19 0.901120 82.699700 83.062300 86.545800 99.962900 111.931000 131.377000 58.662600 91.893500 74.955000 80.984700 103.717000 147.624000 0.032936 11.416977
Gene:AT1G09100 OctamerElement:AtREG630 REG CGACATCG 135.5 TAIR9 TAIR:At1g09100 Chr1 2939426 139 2939419 132 - 2939287 29 2939258 264657_at Diurnal_Condition:LLHC 19 0.901120 82.699700 83.062300 86.545800 99.962900 111.931000 131.377000 58.662600 91.893500 74.955000 80.984700 103.717000 147.624000 0.032936 11.416977
Gene:AT1G09100 OctamerElement:AtREG593 REG CCCGGGTC 177.5 TAIR9 TAIR:At1g09100 Chr1 2939468 181 2939461 174 - 2939287 29 2939258 264657_at Diurnal_Condition:LLHC 19 0.901120 82.699700 83.062300 86.545800 99.962900 111.931000 131.377000 58.662600 91.893500 74.955000 80.984700 103.717000 147.624000 0.032936 11.416977
Gene:AT3G03100 OctamerElement:AtREG543 | OctamerElement:AtREG574 REG GCCCAACA | AGCCCAAC 65.5 | 66.5 TAIR9 TAIR:At3g03100 Chr3 707688 | 707689 69 | 70 707681 | 707682 62 | 63 - 707619 41 707578 258847_at Diurnal_Condition:LLHC 4 0.851591 1342.020000 1469.320000 1265.330000 1044.330000 1039.660000 754.920000 1330.840000 1550.190000 1385.560000 1524.960000 1277.100000 960.569000 0.034343 118.228144
Gene:AT3G03100 OctamerElement:AtREG458 | OctamerElement:AtREG445 REG TGGCCCAG | GTGGCCCA 89.5 | 90.5 TAIR9 TAIR:At3g03100 Chr3 707712 | 707713 93 | 94 707705 | 707706 86 | 87 - 707619 41 707578 258847_at Diurnal_Condition:LLHC 4 0.851591 1342.020000 1469.320000 1265.330000 1044.330000 1039.660000 754.920000 1330.840000 1550.190000 1385.560000 1524.960000 1277.100000 960.569000 0.034343 118.228144
Gene:AT3G57330 OctamerElement:AtREG516 | OctamerElement:AtREG455 | OctamerElement:AtREG412 | OctamerElement:AtREG519 REG ACCGGGTT | AACCGGGT | TAAACCGG | GTAAACCG 57.5 | 58.5 | 60.5 | 61.5 TAIR9 TAIR:At3g57330 Chr3 21216580 | 21216581 | 21216583 | 21216584 61 | 62 | 64 | 65 21216573 | 21216574 | 21216576 | 21216577 54 | 55 | 57 | 58 - 21216519 144 21216375 251649_at Diurnal_Condition:LLHC 5 0.642906 378.023000 435.990000 364.876000 323.136000 370.649000 308.592000 284.484000 410.931000 309.763000 388.996000 260.125000 243.774000 0.035032 24.424387
Gene:AT3G57330 OctamerElement:AtREG404 REG CCCGGCCC 79.5 TAIR9 TAIR:At3g57330 Chr3 21216602 83 21216595 76 - 21216519 144 21216375 251649_at Diurnal_Condition:LLHC 5 0.642906 378.023000 435.990000 364.876000 323.136000 370.649000 308.592000 284.484000 410.931000 309.763000 388.996000 260.125000 243.774000 0.035032 24.424387
Gene:AT3G57330 OctamerElement:AtREG375 | OctamerElement:AtREG383 REG CGGGTCGG | TCGGGTCG 243.5 | 244.5 TAIR9 TAIR:At3g57330 Chr3 21216766 | 21216767 247 | 248 21216759 | 21216760 240 | 241 - 21216519 144 21216375 251649_at Diurnal_Condition:LLHC 5 0.642906 378.023000 435.990000 364.876000 323.136000 370.649000 308.592000 284.484000 410.931000 309.763000 388.996000 260.125000 243.774000 0.035032 24.424387
Gene:AT5G60600 OctamerElement:AtREG592 REG GGGTCAAA 129.5 TAIR9 TAIR:At5g60600 Chr5 24358833 -133 24358840 -126 + 24358966 -481 24359447 247637_at Diurnal_Condition:LLHC 5 0.565225 1309.070000 1565.780000 1428.820000 1578.320000 1344.380000 1400.290000 1303.790000 1457.760000 1307.740000 1224.970000 1199.090000 1227.020000 0.037570 42.532565
Gene:AT5G60600 OctamerElement:AtREG627 REG TTCCACGT 81.5 TAIR9 TAIR:At5g60600 Chr5 24358881 -85 24358888 -78 + 24358966 -481 24359447 247637_at Diurnal_Condition:LLHC 5 0.565225 1309.070000 1565.780000 1428.820000 1578.320000 1344.380000 1400.290000 1303.790000 1457.760000 1307.740000 1224.970000 1199.090000 1227.020000 0.037570 42.532565
Gene:AT3G60140 OctamerElement:AtREG416 REG GGCCTTAA 243.5 TAIR9 TAIR:At3g60140 Chr3 22216427 -247 22216434 -240 + 22216674 -79 22216753 251428_at Diurnal_Condition:LLHC 6 0.653208 28.201900 98.002600 95.202800 23.436500 26.998200 29.148700 8.977360 14.727300 30.495400 8.444650 9.151530 6.280920 0.040869 12.041961
Gene:AT3G60140 OctamerElement:AtREG627 | OctamerElement:AtREG495 | OctamerElement:AtREG578 REG TTCCACGT | CCACGTAG | GATGACGT 68.5 | 66.5 | 59.5 TAIR9 TAIR:At3g60140 Chr3 22216602 | 22216604 | 22216611 -72 | -70 | -63 22216609 | 22216611 | 22216618 -65 | -63 | -56 + 22216674 -79 22216753 251428_at Diurnal_Condition:LLHC 6 0.653208 28.201900 98.002600 95.202800 23.436500 26.998200 29.148700 8.977360 14.727300 30.495400 8.444650 9.151530 6.280920 0.040869 12.041961
Gene:AT4G02090 OctamerElement:AtREG624 REG CCCAATAG 292.5 TAIR9 TAIR:At4g02090 Chr4 922804 -296 922811 -289 + 923100 -22 923122 255528_at Diurnal_Condition:LLHC 6 0.918044 10.191500 15.337900 15.913800 6.326770 8.770460 5.555260 9.369360 18.529300 17.213400 10.824700 10.276600 7.236210 0.043709 2.537322
Gene:AT4G02090 OctamerElement:AtREG632 REG AAAGTCAA 104.5 TAIR9 TAIR:At4g02090 Chr4 922992 -108 922999 -101 + 923100 -22 923122 255528_at Diurnal_Condition:LLHC 6 0.918044 10.191500 15.337900 15.913800 6.326770 8.770460 5.555260 9.369360 18.529300 17.213400 10.824700 10.276600 7.236210 0.043709 2.537322
Gene:AT3G52640 OctamerElement:AtREG549 REG TAAAAGCC 175.5 TAIR9 TAIR:At3g52640 Chr3 19520723 179 19520716 172 - 19520544 254 19520290 252028_at Diurnal_Condition:LLHC 20 0.675179 10.320600 8.026880 10.412800 13.828700 8.761460 22.172500 11.727400 7.200280 11.416400 11.037900 14.502500 12.898200 0.044823 1.535735
Gene:AT3G52640 OctamerElement:AtREG620 REG TATATGGG 248.5 TAIR9 TAIR:At3g52640 Chr3 19520796 252 19520789 245 - 19520544 254 19520290 252028_at Diurnal_Condition:LLHC 20 0.675179 10.320600 8.026880 10.412800 13.828700 8.761460 22.172500 11.727400 7.200280 11.416400 11.037900 14.502500 12.898200 0.044823 1.535735
Gene:AT5G55550 OctamerElement:AtREG604 REG CTTAATGG 78.5 TAIR9 TAIR:At5g55550 Chr5 22504090 82 22504083 75 - 22504008 350 22503658 248063_at Diurnal_Condition:LLHC 1 0.345056 12.922100 13.627000 11.559500 10.702500 11.661100 16.516300 12.899000 15.341700 18.791300 14.525600 16.463300 11.735700 0.051325 0.212419
Gene:AT5G55550 OctamerElement:AtREG546 REG CCCATTAT 178.5 TAIR9 TAIR:At5g55550 Chr5 22504190 182 22504183 175 - 22504008 350 22503658 248063_at Diurnal_Condition:LLHC 1 0.345056 12.922100 13.627000 11.559500 10.702500 11.661100 16.516300 12.899000 15.341700 18.791300 14.525600 16.463300 11.735700 0.051325 0.212419
Gene:AT2G38870 OctamerElement:AtREG599 REG ACGACACC 67.5 TAIR9 TAIR:At2g38870 Chr2 16237170 71 16237163 64 - 16237099 49 16237050 266168_at Diurnal_Condition:LLHC 4 0.738483 247.492000 337.085000 219.597000 261.582000 169.152000 89.776600 120.597000 311.309000 161.507000 214.661000 122.874000 139.390000 0.051528 36.687121
Gene:AT2G38870 OctamerElement:AtREG632 REG TTGACTTT 94.5 TAIR9 TAIR:At2g38870 Chr2 16237197 98 16237190 91 - 16237099 49 16237050 266168_at Diurnal_Condition:LLHC 4 0.738483 247.492000 337.085000 219.597000 261.582000 169.152000 89.776600 120.597000 311.309000 161.507000 214.661000 122.874000 139.390000 0.051528 36.687121
Gene:AT2G38870 OctamerElement:AtREG584 REG GGGCTATT 123.5 TAIR9 TAIR:At2g38870 Chr2 16237226 127 16237219 120 - 16237099 49 16237050 266168_at Diurnal_Condition:LLHC 4 0.738483 247.492000 337.085000 219.597000 261.582000 169.152000 89.776600 120.597000 311.309000 161.507000 214.661000 122.874000 139.390000 0.051528 36.687121
Gene:AT4G35420 OctamerElement:AtREG616 REG GCCCTTAT 281.5 TAIR9 TAIR:At4g35420 Chr4 16835904 285 16835897 278 - 16835619 8 16835611 253195_at Diurnal_Condition:LLHC 3 0.741314 11.660500 8.918280 8.787440 8.796690 7.239030 7.070020 7.373060 7.712350 10.612300 8.397600 6.664480 5.685190 0.056206 0.676414
Gene:AT4G36030 OctamerElement:AtREG616 REG ATAAGGGC 201.5 TAIR9 TAIR:At4g36030 Chr4 17047318 205 17047311 198 - 17047113 17 17047096 253124_at Diurnal_Condition:LLHC 7 0.888704 10.040900 15.370200 22.079600 10.428800 7.733220 8.570640 10.906000 14.331700 15.660200 9.305320 6.680720 10.582500 0.056839 2.444961
Gene:AT2G47180 OctamerElement:AtREG562 | OctamerElement:AtREG453 | OctamerElement:AtREG453 REG ACGTGTAC | TACACGTG | CACGTGTA 71.5 | 72.5 | 74.5 TAIR9 TAIR:At2g47180 Chr2 19370519 | 19370520 | 19370522 75 | 76 | 78 19370512 | 19370513 | 19370515 68 | 69 | 71 - 19370444 72 19370372 263320_at Diurnal_Condition:LLHC 6 0.876684 9.825080 25.408700 18.366000 16.439200 7.688380 7.929140 11.675200 36.203900 29.670800 12.512200 8.602240 7.590360 0.059423 5.618246
Gene:AT2G47180 OctamerElement:AtREG406 REG GGTCCCAC 139.5 TAIR9 TAIR:At2g47180 Chr2 19370587 143 19370580 136 - 19370444 72 19370372 263320_at Diurnal_Condition:LLHC 6 0.876684 9.825080 25.408700 18.366000 16.439200 7.688380 7.929140 11.675200 36.203900 29.670800 12.512200 8.602240 7.590360 0.059423 5.618246
Gene:AT1G55930 OctamerElement:AtREG473 | OctamerElement:AtREG412 | OctamerElement:AtREG436 | OctamerElement:AtREG552 REG TTAAACCG | TAAACCGG | AAACCGGT | AACCGGTC 104.5 | 103.5 | 102.5 | 101.5 TAIR9 TAIR:At1g55930 Chr1 20918603 | 20918604 | 20918605 | 20918606 -108 | -107 | -106 | -105 20918610 | 20918611 | 20918612 | 20918613 -101 | -100 | -99 | -98 + 20918711 -184 20918895 260598_at Diurnal_Condition:LLHC 19 0.374955 14.600600 12.903600 16.072200 15.631700 14.348300 21.947400 15.903300 19.983600 14.714700 17.926800 18.982900 15.199600 0.062581 0.491110
Gene:AT1G55930 OctamerElement:AtREG570 | OctamerElement:AtREG623 | OctamerElement:AtREG567 REG TAAGGGTA | AAGGGTAT | AGGGTATT 73.5 | 72.5 | 71.5 TAIR9 TAIR:At1g55930 Chr1 20918634 | 20918635 | 20918636 -77 | -76 | -75 20918641 | 20918642 | 20918643 -70 | -69 | -68 + 20918711 -184 20918895 260598_at Diurnal_Condition:LLHC 19 0.374955 14.600600 12.903600 16.072200 15.631700 14.348300 21.947400 15.903300 19.983600 14.714700 17.926800 18.982900 15.199600 0.062581 0.491110
Gene:AT1G65520 OctamerElement:AtREG355 | OctamerElement:AtREG402 | OctamerElement:AtREG407 | OctamerElement:AtREG525 REG TATTGGGC | ATTGGGCT | TTGGGCTT | TGGGCTTG 94.5 | 95.5 | 96.5 | 97.5 TAIR9 TAIR:At1g65520 Chr1 24362130 | 24362131 | 24362132 | 24362133 98 | 99 | 100 | 101 24362123 | 24362124 | 24362125 | 24362126 91 | 92 | 93 | 94 - 24362032 139 24361893 264627_at Diurnal_Condition:LLHC 7 0.797985 21.673000 25.464500 23.305600 21.150400 20.228000 14.970200 18.300900 27.122800 20.497300 22.399000 15.862100 18.702300 0.064942 1.921959
Gene:AT1G65520 OctamerElement:AtREG525 | OctamerElement:AtREG407 | OctamerElement:AtREG402 | OctamerElement:AtREG355 REG TGGGCTTG | TTGGGCTT | ATTGGGCT | TATTGGGC 128.5 | 129.5 | 130.5 | 131.5 TAIR9 TAIR:At1g65520 Chr1 24362164 | 24362165 | 24362166 | 24362167 132 | 133 | 134 | 135 24362157 | 24362158 | 24362159 | 24362160 125 | 126 | 127 | 128 - 24362032 139 24361893 264627_at Diurnal_Condition:LLHC 7 0.797985 21.673000 25.464500 23.305600 21.150400 20.228000 14.970200 18.300900 27.122800 20.497300 22.399000 15.862100 18.702300 0.064942 1.921959
Gene:AT1G65520 OctamerElement:AtREG409 REG GGGCTTTT 163.5 TAIR9 TAIR:At1g65520 Chr1 24362199 167 24362192 160 - 24362032 139 24361893 264627_at Diurnal_Condition:LLHC 7 0.797985 21.673000 25.464500 23.305600 21.150400 20.228000 14.970200 18.300900 27.122800 20.497300 22.399000 15.862100 18.702300 0.064942 1.921959
Gene:AT2G39950 OctamerElement:AtREG653 REG TCAAAACG 114.5 TAIR9 TAIR:At2g39950 Chr2 16680607 118 16680600 111 - 16680489 285 16680204 267347_at Diurnal_Condition:LLHC 6 0.728058 110.766000 115.994000 129.430000 102.917000 68.256500 91.186400 120.408000 90.191800 102.311000 124.988000 95.187900 88.387200 0.067099 6.850510
Gene:AT2G39950 OctamerElement:AtREG523 REG GGACCCAC 134.5 TAIR9 TAIR:At2g39950 Chr2 16680627 138 16680620 131 - 16680489 285 16680204 267347_at Diurnal_Condition:LLHC 6 0.728058 110.766000 115.994000 129.430000 102.917000 68.256500 91.186400 120.408000 90.191800 102.311000 124.988000 95.187900 88.387200 0.067099 6.850510
Gene:AT2G39950 OctamerElement:AtREG444 | OctamerElement:AtREG379 | OctamerElement:AtREG388 | OctamerElement:AtREG419 | OctamerElement:AtREG440 | OctamerElement:AtREG515 REG CGTGGCAC | ACGTGGCA | GACGTGGC | TGACGTGG | CTGACGTG | GCTGACGT 187.5 | 188.5 | 189.5 | 190.5 | 191.5 | 192.5 TAIR9 TAIR:At2g39950 Chr2 16680680 | 16680681 | 16680682 | 16680683 | 16680684 | 16680685 191 | 192 | 193 | 194 | 195 | 196 16680673 | 16680674 | 16680675 | 16680676 | 16680677 | 16680678 184 | 185 | 186 | 187 | 188 | 189 - 16680489 285 16680204 267347_at Diurnal_Condition:LLHC 6 0.728058 110.766000 115.994000 129.430000 102.917000 68.256500 91.186400 120.408000 90.191800 102.311000 124.988000 95.187900 88.387200 0.067099 6.850510
Gene:AT2G39950 OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG391 | OctamerElement:AtREG400 | OctamerElement:AtREG387 REG CCCATTAA | GCCCATTA | GGCCCATT | GGGCCCAT | AGGGCCCA | TAGGGCCC 202.5 | 203.5 | 204.5 | 205.5 | 206.5 | 207.5 TAIR9 TAIR:At2g39950 Chr2 16680695 | 16680696 | 16680697 | 16680698 | 16680699 | 16680700 206 | 207 | 208 | 209 | 210 | 211 16680688 | 16680689 | 16680690 | 16680691 | 16680692 | 16680693 199 | 200 | 201 | 202 | 203 | 204 - 16680489 285 16680204 267347_at Diurnal_Condition:LLHC 6 0.728058 110.766000 115.994000 129.430000 102.917000 68.256500 91.186400 120.408000 90.191800 102.311000 124.988000 95.187900 88.387200 0.067099 6.850510
Gene:AT2G39950 OctamerElement:AtREG403 | OctamerElement:AtREG354 | OctamerElement:AtREG370 | OctamerElement:AtREG433 REG GGCCCATC | AGGCCCAT | CAGGCCCA | ACAGGCCC 221.5 | 222.5 | 223.5 | 224.5 TAIR9 TAIR:At2g39950 Chr2 16680714 | 16680715 | 16680716 | 16680717 225 | 226 | 227 | 228 16680707 | 16680708 | 16680709 | 16680710 218 | 219 | 220 | 221 - 16680489 285 16680204 267347_at Diurnal_Condition:LLHC 6 0.728058 110.766000 115.994000 129.430000 102.917000 68.256500 91.186400 120.408000 90.191800 102.311000 124.988000 95.187900 88.387200 0.067099 6.850510
Gene:AT3G47836 OctamerElement:AtREG568 | OctamerElement:AtREG514 | OctamerElement:AtREG598 REG AAACCGAA | TAAACCGA | ATAAACCG 82.5 | 83.5 | 84.5 TAIR9 TAIR:At3g47836 Chr3 17651844 | 17651845 | 17651846 86 | 87 | 88 17651837 | 17651838 | 17651839 79 | 80 | 81 - 17651758 109 17651649 252390_at Diurnal_Condition:LLHC 6 0.386979 591.921000 529.596000 483.222000 484.090000 520.471000 322.540000 362.256000 449.870000 481.185000 443.852000 386.940000 510.491000 0.074260 14.684143
Gene:AT3G47836 OctamerElement:AtREG586 | OctamerElement:AtREG554 REG CGTTGGAT | CCGTTGGA 187.5 | 188.5 TAIR9 TAIR:At3g47836 Chr3 17651949 | 17651950 191 | 192 17651942 | 17651943 184 | 185 - 17651758 109 17651649 252390_at Diurnal_Condition:LLHC 6 0.386979 591.921000 529.596000 483.222000 484.090000 520.471000 322.540000 362.256000 449.870000 481.185000 443.852000 386.940000 510.491000 0.074260 14.684143
Gene:AT3G47836 OctamerElement:AtREG436 REG ACCGGTTT 226.5 TAIR9 TAIR:At3g47836 Chr3 17651988 230 17651981 223 - 17651758 109 17651649 252390_at Diurnal_Condition:LLHC 6 0.386979 591.921000 529.596000 483.222000 484.090000 520.471000 322.540000 362.256000 449.870000 481.185000 443.852000 386.940000 510.491000 0.074260 14.684143
Gene:AT5G43100 OctamerElement:AtREG470 | OctamerElement:AtREG366 | OctamerElement:AtREG382 | OctamerElement:AtREG367 | OctamerElement:AtREG379 | OctamerElement:AtREG444 REG AGACACGT | GACACGTG | ACACGTGG | CACGTGGC | ACGTGGCA | CGTGGCAC 117.5 | 116.5 | 115.5 | 114.5 | 113.5 | 112.5 TAIR9 TAIR:At5g43100 Chr5 17299052 | 17299053 | 17299054 | 17299055 | 17299056 | 17299057 -121 | -120 | -119 | -118 | -117 | -116 17299059 | 17299060 | 17299061 | 17299062 | 17299063 | 17299064 -114 | -113 | -112 | -111 | -110 | -109 + 17299173 -91 17299264 249130_at Diurnal_Condition:LLHC 4 0.760513 40.904100 45.016500 48.542500 41.798400 31.360600 46.615700 41.057200 42.399100 42.099100 47.561800 35.749600 37.612000 0.074793 1.928669
Gene:AT5G57840 OctamerElement:AtREG452 REG TTGCCACG 146.5 TAIR9 TAIR:At5g57840 Chr5 23436121 150 23436114 143 - 23435971 810 23435161 247837_at Diurnal_Condition:LLHC 6 0.621509 4.336070 5.554280 6.830930 4.479230 4.514760 5.903530 3.660170 6.155720 5.593790 5.053120 3.956600 6.229930 0.077983 0.254802
Gene:AT5G57840 OctamerElement:AtREG601 REG ATAAAGCC 162.5 TAIR9 TAIR:At5g57840 Chr5 23436137 166 23436130 159 - 23435971 810 23435161 247837_at Diurnal_Condition:LLHC 6 0.621509 4.336070 5.554280 6.830930 4.479230 4.514760 5.903530 3.660170 6.155720 5.593790 5.053120 3.956600 6.229930 0.077983 0.254802
Gene:AT5G57840 OctamerElement:AtREG624 REG CCCAATAG 199.5 TAIR9 TAIR:At5g57840 Chr5 23436174 203 23436167 196 - 23435971 810 23435161 247837_at Diurnal_Condition:LLHC 6 0.621509 4.336070 5.554280 6.830930 4.479230 4.514760 5.903530 3.660170 6.155720 5.593790 5.053120 3.956600 6.229930 0.077983 0.254802
Gene:AT1G17810 OctamerElement:AtREG547 | OctamerElement:AtREG408 | OctamerElement:AtREG382 | OctamerElement:AtREG590 REG ATCCACGT | TCCACGTG | CCACGTGT | CACGTGTT 107.5 | 106.5 | 105.5 | 104.5 TAIR9 TAIR:At1g17810 Chr1 6130046 | 6130047 | 6130048 | 6130049 -111 | -110 | -109 | -108 6130053 | 6130054 | 6130055 | 6130056 -104 | -103 | -102 | -101 + 6130157 -52 6130209 255905_at Diurnal_Condition:LLHC 7 0.896253 3.602990 4.001880 4.148330 3.446930 3.484380 3.491460 3.601530 3.769930 4.134360 3.435990 3.439820 3.205260 0.086220 0.175673
Gene:AT4G24840 OctamerElement:AtREG550 | OctamerElement:AtREG496 | OctamerElement:AtREG521 REG CGGTTTGG | CCGGTTTG | TCCGGTTT 79.5 | 80.5 | 81.5 TAIR9 TAIR:At4g24840 Chr4 12801062 | 12801063 | 12801064 83 | 84 | 85 12801055 | 12801056 | 12801057 76 | 77 | 78 - 12800979 53 12800926 254087_at Diurnal_Condition:LLHC 4 0.500402 180.526000 158.727000 196.129000 181.321000 151.159000 182.580000 134.694000 163.655000 144.915000 156.968000 127.409000 159.054000 0.088454 3.120260
Gene:AT4G24840 OctamerElement:AtREG632 REG TTGACTTT 123.5 TAIR9 TAIR:At4g24840 Chr4 12801106 127 12801099 120 - 12800979 53 12800926 254087_at Diurnal_Condition:LLHC 4 0.500402 180.526000 158.727000 196.129000 181.321000 151.159000 182.580000 134.694000 163.655000 144.915000 156.968000 127.409000 159.054000 0.088454 3.120260
Gene:AT4G24840 OctamerElement:AtREG529 REG TTTTGGGC 179.5 TAIR9 TAIR:At4g24840 Chr4 12801162 183 12801155 176 - 12800979 53 12800926 254087_at Diurnal_Condition:LLHC 4 0.500402 180.526000 158.727000 196.129000 181.321000 151.159000 182.580000 134.694000 163.655000 144.915000 156.968000 127.409000 159.054000 0.088454 3.120260
Gene:AT4G24840 OctamerElement:AtREG636 REG TAAGGGGT 208.5 TAIR9 TAIR:At4g24840 Chr4 12801191 212 12801184 205 - 12800979 53 12800926 254087_at Diurnal_Condition:LLHC 4 0.500402 180.526000 158.727000 196.129000 181.321000 151.159000 182.580000 134.694000 163.655000 144.915000 156.968000 127.409000 159.054000 0.088454 3.120260
Gene:AT4G24840 OctamerElement:AtREG605 REG CGGTTAAG 250.5 TAIR9 TAIR:At4g24840 Chr4 12801233 254 12801226 247 - 12800979 53 12800926 254087_at Diurnal_Condition:LLHC 4 0.500402 180.526000 158.727000 196.129000 181.321000 151.159000 182.580000 134.694000 163.655000 144.915000 156.968000 127.409000 159.054000 0.088454 3.120260
Gene:AT4G24840 OctamerElement:AtREG632 REG TTGACTTT 264.5 TAIR9 TAIR:At4g24840 Chr4 12801247 268 12801240 261 - 12800979 53 12800926 254087_at Diurnal_Condition:LLHC 4 0.500402 180.526000 158.727000 196.129000 181.321000 151.159000 182.580000 134.694000 163.655000 144.915000 156.968000 127.409000 159.054000 0.088454 3.120260
Gene:AT4G01900 OctamerElement:AtREG511 | OctamerElement:AtREG514 REG CTAAACCG | TAAACCGA 121.5 | 120.5 TAIR9 TAIR:At4g01900 Chr4 821554 | 821555 -125 | -124 821561 | 821562 -118 | -117 + 821679 -57 821736 255558_at Diurnal_Condition:LLHC 4 0.489966 591.047000 598.836000 546.323000 585.933000 486.547000 393.125000 411.857000 543.922000 498.363000 573.868000 361.841000 658.915000 0.092723 20.719700
Gene:AT4G01900 OctamerElement:AtREG511 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | OctamerElement:AtREG534 | OctamerElement:AtREG644 REG CTAAACCG | TAAACCGG | AAACCGGA | AACCGGAA | ACCGGAAA 111.5 | 110.5 | 109.5 | 108.5 | 107.5 TAIR9 TAIR:At4g01900 Chr4 821564 | 821565 | 821566 | 821567 | 821568 -115 | -114 | -113 | -112 | -111 821571 | 821572 | 821573 | 821574 | 821575 -108 | -107 | -106 | -105 | -104 + 821679 -57 821736 255558_at Diurnal_Condition:LLHC 4 0.489966 591.047000 598.836000 546.323000 585.933000 486.547000 393.125000 411.857000 543.922000 498.363000 573.868000 361.841000 658.915000 0.092723 20.719700
Gene:AT4G01900 OctamerElement:AtREG511 | OctamerElement:AtREG412 | OctamerElement:AtREG436 | OctamerElement:AtREG436 | OctamerElement:AtREG542 REG CTAAACCG | TAAACCGG | AAACCGGT | ACCGGTTT | CCGGTTTT 87.5 | 86.5 | 85.5 | 83.5 | 82.5 TAIR9 TAIR:At4g01900 Chr4 821588 | 821589 | 821590 | 821592 | 821593 -91 | -90 | -89 | -87 | -86 821595 | 821596 | 821597 | 821599 | 821600 -84 | -83 | -82 | -80 | -79 + 821679 -57 821736 255558_at Diurnal_Condition:LLHC 4 0.489966 591.047000 598.836000 546.323000 585.933000 486.547000 393.125000 411.857000 543.922000 498.363000 573.868000 361.841000 658.915000 0.092723 20.719700
Gene:AT4G01900 OctamerElement:AtREG511 | OctamerElement:AtREG514 | OctamerElement:AtREG641 REG CTAAACCG | TAAACCGA | AACCGACT 69.5 | 68.5 | 66.5 TAIR9 TAIR:At4g01900 Chr4 821606 | 821607 | 821609 -73 | -72 | -70 821613 | 821614 | 821616 -66 | -65 | -63 + 821679 -57 821736 255558_at Diurnal_Condition:LLHC 4 0.489966 591.047000 598.836000 546.323000 585.933000 486.547000 393.125000 411.857000 543.922000 498.363000 573.868000 361.841000 658.915000 0.092723 20.719700
Gene:AT4G24110 OctamerElement:AtREG441 | OctamerElement:AtREG550 REG AACCGCGT | CCAAACCG 108.5 | 111.5 TAIR9 TAIR:At4g24110 Chr4 12520922 | 12520925 112 | 115 12520915 | 12520918 105 | 108 - 12520810 48 12520762 254200_at Diurnal_Condition:LLHC 5 0.854644 5.378970 11.279500 6.544280 5.950070 5.253750 4.401970 4.848340 7.867340 6.717570 6.790280 6.001680 5.492610 0.098297 0.812794
Gene:AT4G24110 OctamerElement:AtREG515 | OctamerElement:AtREG440 | OctamerElement:AtREG419 | OctamerElement:AtREG513 REG ACGTCAGC | CACGTCAG | CCACGTCA | GTCCACGT 121.5 | 122.5 | 123.5 | 125.5 TAIR9 TAIR:At4g24110 Chr4 12520935 | 12520936 | 12520937 | 12520939 125 | 126 | 127 | 129 12520928 | 12520929 | 12520930 | 12520932 118 | 119 | 120 | 122 - 12520810 48 12520762 254200_at Diurnal_Condition:LLHC 5 0.854644 5.378970 11.279500 6.544280 5.950070 5.253750 4.401970 4.848340 7.867340 6.717570 6.790280 6.001680 5.492610 0.098297 0.812794
Gene:AT4G24110 OctamerElement:AtREG597 | OctamerElement:AtREG617 | OctamerElement:AtREG592 REG GACCCGAA | TGACCCGA | TTTGACCC 170.5 | 171.5 | 173.5 TAIR9 TAIR:At4g24110 Chr4 12520984 | 12520985 | 12520987 174 | 175 | 177 12520977 | 12520978 | 12520980 167 | 168 | 170 - 12520810 48 12520762 254200_at Diurnal_Condition:LLHC 5 0.854644 5.378970 11.279500 6.544280 5.950070 5.253750 4.401970 4.848340 7.867340 6.717570 6.790280 6.001680 5.492610 0.098297 0.812794
Gene:AT2G03800 OctamerElement:AtREG645 REG TTTAACCG 240.5 TAIR9 TAIR:At2g03800 Chr2 1156510 -244 1156517 -237 + 1156754 -28 1156782 264032_at Diurnal_Condition:LLHC 5 0.844053 26.769400 45.487800 35.641800 28.774100 25.139700 26.407000 30.607500 46.373800 33.171700 40.942800 28.086500 25.868300 0.103211 3.983266
Gene:AT3G26618 OctamerElement:AtREG546 | OctamerElement:AtREG357 | OctamerElement:AtREG372 | OctamerElement:AtREG378 | OctamerElement:AtREG376 | OctamerElement:AtREG409 | OctamerElement:AtREG549 REG ATAATGGG | TAATGGGC | AGCCCATT | AAGCCCAT | TGGGCTTT | GGGCTTTT | GGCTTTTA 194.5 | 193.5 | 192.5 | 191.5 | 190.5 | 189.5 | 188.5 TAIR9 TAIR:At3g26618 Chr3 9788384 | 9788385 | 9788386 | 9788387 | 9788388 | 9788389 | 9788390 -198 | -197 | -196 | -195 | -194 | -193 | -192 9788391 | 9788392 | 9788393 | 9788394 | 9788395 | 9788396 | 9788397 -191 | -190 | -189 | -188 | -187 | -186 | -185 + 9788582 -272 9788854 261204_s_at Diurnal_Condition:LLHC 20 0.513063 832.935000 775.398000 796.010000 922.705000 926.241000 1094.650000 863.358000 897.260000 738.266000 828.753000 913.981000 697.507000 0.103713 30.715170
Gene:AT3G26618 OctamerElement:AtREG545 | OctamerElement:AtREG525 | OctamerElement:AtREG378 | OctamerElement:AtREG477 | OctamerElement:AtREG394 REG TTAAAGCC | CAAGCCCA | AAGCCCAT | AGCCCATA | GCCCATAA 177.5 | 170.5 | 169.5 | 168.5 | 167.5 TAIR9 TAIR:At3g26618 Chr3 9788401 | 9788408 | 9788409 | 9788410 | 9788411 -181 | -174 | -173 | -172 | -171 9788408 | 9788415 | 9788416 | 9788417 | 9788418 -174 | -167 | -166 | -165 | -164 + 9788582 -272 9788854 261204_s_at Diurnal_Condition:LLHC 20 0.513063 832.935000 775.398000 796.010000 922.705000 926.241000 1094.650000 863.358000 897.260000 738.266000 828.753000 913.981000 697.507000 0.103713 30.715170
Gene:AT3G26618 OctamerElement:AtREG372 | OctamerElement:AtREG643 REG AGCCCATT | GCCCATTC 148.5 | 147.5 TAIR9 TAIR:At3g26618 Chr3 9788430 | 9788431 -152 | -151 9788437 | 9788438 -145 | -144 + 9788582 -272 9788854 261204_s_at Diurnal_Condition:LLHC 20 0.513063 832.935000 775.398000 796.010000 922.705000 926.241000 1094.650000 863.358000 897.260000 738.266000 828.753000 913.981000 697.507000 0.103713 30.715170
Gene:AT3G26618 OctamerElement:AtREG488 REG CCGCGTTA 104.5 TAIR9 TAIR:At3g26618 Chr3 9788474 -108 9788481 -101 + 9788582 -272 9788854 261204_s_at Diurnal_Condition:LLHC 20 0.513063 832.935000 775.398000 796.010000 922.705000 926.241000 1094.650000 863.358000 897.260000 738.266000 828.753000 913.981000 697.507000 0.103713 30.715170
Gene:AT3G26618 OctamerElement:AtREG583 | OctamerElement:AtREG628 | OctamerElement:AtREG590 REG GTCACGTG | TCACGTGT | CACGTGTT 52.5 | 51.5 | 50.5 TAIR9 TAIR:At3g26618 Chr3 9788526 | 9788527 | 9788528 -56 | -55 | -54 9788533 | 9788534 | 9788535 -49 | -48 | -47 + 9788582 -272 9788854 261204_s_at Diurnal_Condition:LLHC 20 0.513063 832.935000 775.398000 796.010000 922.705000 926.241000 1094.650000 863.358000 897.260000 738.266000 828.753000 913.981000 697.507000 0.103713 30.715170
Gene:AT3G62890 OctamerElement:AtREG522 REG ACGGCACG 182.5 TAIR9 TAIR:At3g62890 Chr3 23245972 -186 23245979 -179 + 23246158 -10 23246168 251209_at Diurnal_Condition:LLHC 19 0.679146 4.911720 5.052870 4.565030 5.468800 5.173990 7.521320 5.333130 6.211900 6.849110 6.146800 6.707120 7.069270 0.105442 0.273825
Gene:AT3G62890 OctamerElement:AtREG528 | OctamerElement:AtREG480 | OctamerElement:AtREG640 REG ACCGGTTC | CCGGTTCA | CGGTTCAA 63.5 | 62.5 | 61.5 TAIR9 TAIR:At3g62890 Chr3 23246091 | 23246092 | 23246093 -67 | -66 | -65 23246098 | 23246099 | 23246100 -60 | -59 | -58 + 23246158 -10 23246168 251209_at Diurnal_Condition:LLHC 19 0.679146 4.911720 5.052870 4.565030 5.468800 5.173990 7.521320 5.333130 6.211900 6.849110 6.146800 6.707120 7.069270 0.105442 0.273825
Gene:AT3G62890 OctamerElement:AtREG568 REG TTCGGTTT 53.5 TAIR9 TAIR:At3g62890 Chr3 23246101 -57 23246108 -50 + 23246158 -10 23246168 251209_at Diurnal_Condition:LLHC 19 0.679146 4.911720 5.052870 4.565030 5.468800 5.173990 7.521320 5.333130 6.211900 6.849110 6.146800 6.707120 7.069270 0.105442 0.273825
Gene:AT1G13220 OctamerElement:AtREG399 | OctamerElement:AtREG401 REG TAACGGGC | AACGGGCC 106.5 | 105.5 TAIR9 TAIR:At1g13220 Chr1 4515451 | 4515452 -110 | -109 4515458 | 4515459 -103 | -102 + 4515561 -99 4515660 262773_at Diurnal_Condition:LLHC 5 0.862539 24.146700 27.483800 25.175900 24.344200 15.922400 25.281500 23.237800 24.625100 30.954700 30.702900 12.544500 20.909400 0.106548 2.424494
Gene:AT1G13220 OctamerElement:AtREG461 | OctamerElement:AtREG402 | OctamerElement:AtREG407 | OctamerElement:AtREG376 | OctamerElement:AtREG409 REG CATTGGGC | ATTGGGCT | TTGGGCTT | TGGGCTTT | GGGCTTTT 89.5 | 88.5 | 87.5 | 86.5 | 85.5 TAIR9 TAIR:At1g13220 Chr1 4515468 | 4515469 | 4515470 | 4515471 | 4515472 -93 | -92 | -91 | -90 | -89 4515475 | 4515476 | 4515477 | 4515478 | 4515479 -86 | -85 | -84 | -83 | -82 + 4515561 -99 4515660 262773_at Diurnal_Condition:LLHC 5 0.862539 24.146700 27.483800 25.175900 24.344200 15.922400 25.281500 23.237800 24.625100 30.954700 30.702900 12.544500 20.909400 0.106548 2.424494
Gene:AT1G13220 OctamerElement:AtREG430 | OctamerElement:AtREG360 | OctamerElement:AtREG358 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | OctamerElement:AtREG529 REG TTTAGGCC | TTAGGCCC | TAGGCCCA | AGGCCCAA | GGCCCAAA | GCCCAAAA 61.5 | 60.5 | 59.5 | 58.5 | 57.5 | 56.5 TAIR9 TAIR:At1g13220 Chr1 4515496 | 4515497 | 4515498 | 4515499 | 4515500 | 4515501 -65 | -64 | -63 | -62 | -61 | -60 4515503 | 4515504 | 4515505 | 4515506 | 4515507 | 4515508 -58 | -57 | -56 | -55 | -54 | -53 + 4515561 -99 4515660 262773_at Diurnal_Condition:LLHC 5 0.862539 24.146700 27.483800 25.175900 24.344200 15.922400 25.281500 23.237800 24.625100 30.954700 30.702900 12.544500 20.909400 0.106548 2.424494
Gene:AT1G03030 OctamerElement:AtREG458 | OctamerElement:AtREG384 REG TGGCCCAG | GGCCCAGT 156.5 | 155.5 TAIR9 TAIR:At1g03030 Chr1 701359 | 701360 -160 | -159 701366 | 701367 -153 | -152 + 701519 -102 701621 263167_at Diurnal_Condition:LLHC 5 0.892818 28.172100 71.156300 47.702600 29.278200 37.335600 26.700500 34.636700 69.250200 57.516600 51.443400 28.447300 33.936100 0.106987 8.606342
Gene:AT1G03030 OctamerElement:AtREG459 REG GGCCTTTT 81.5 TAIR9 TAIR:At1g03030 Chr1 701434 -85 701441 -78 + 701519 -102 701621 263167_at Diurnal_Condition:LLHC 5 0.892818 28.172100 71.156300 47.702600 29.278200 37.335600 26.700500 34.636700 69.250200 57.516600 51.443400 28.447300 33.936100 0.106987 8.606342
Gene:AT1G03030 OctamerElement:AtREG438 | OctamerElement:AtREG389 | OctamerElement:AtREG366 | OctamerElement:AtREG366 | OctamerElement:AtREG470 REG ATGACACG | TGACACGT | GACACGTG | CACGTGTC | ACGTGTCT 60.5 | 59.5 | 58.5 | 56.5 | 55.5 TAIR9 TAIR:At1g03030 Chr1 701455 | 701456 | 701457 | 701459 | 701460 -64 | -63 | -62 | -60 | -59 701462 | 701463 | 701464 | 701466 | 701467 -57 | -56 | -55 | -53 | -52 + 701519 -102 701621 263167_at Diurnal_Condition:LLHC 5 0.892818 28.172100 71.156300 47.702600 29.278200 37.335600 26.700500 34.636700 69.250200 57.516600 51.443400 28.447300 33.936100 0.106987 8.606342
Gene:AT1G30520 OctamerElement:AtREG365 | OctamerElement:AtREG376 | OctamerElement:AtREG378 | OctamerElement:AtREG372 | OctamerElement:AtREG386 REG TAAAGCCC | AAAGCCCA | AAGCCCAT | AGCCCATT | GCCCATTT 173.5 | 172.5 | 171.5 | 170.5 | 169.5 TAIR9 TAIR:At1g30520 Chr1 10810814 | 10810815 | 10810816 | 10810817 | 10810818 -177 | -176 | -175 | -174 | -173 10810821 | 10810822 | 10810823 | 10810824 | 10810825 -170 | -169 | -168 | -167 | -166 + 10810991 -48 10811039 261801_at Diurnal_Condition:LLHC 5 0.839546 103.787000 205.932000 139.403000 165.851000 94.709000 108.522000 132.478000 273.625000 167.305000 168.874000 102.740000 94.263400 0.106999 27.870293
Gene:AT1G30520 OctamerElement:AtREG600 | OctamerElement:AtREG418 | OctamerElement:AtREG352 | OctamerElement:AtREG356 | OctamerElement:AtREG370 | OctamerElement:AtREG619 | OctamerElement:AtREG487 REG TAATTGGG | AATTGGGC | ATTGGGCC | TTGGGCCT | TGGGCCTG | GGGCCTGG | GGCCTATA 160.5 | 159.5 | 158.5 | 157.5 | 156.5 | 155.5 | 149.5 TAIR9 TAIR:At1g30520 Chr1 10810827 | 10810828 | 10810829 | 10810830 | 10810831 | 10810832 | 10810838 -164 | -163 | -162 | -161 | -160 | -159 | -153 10810834 | 10810835 | 10810836 | 10810837 | 10810838 | 10810839 | 10810845 -157 | -156 | -155 | -154 | -153 | -152 | -146 + 10810991 -48 10811039 261801_at Diurnal_Condition:LLHC 5 0.839546 103.787000 205.932000 139.403000 165.851000 94.709000 108.522000 132.478000 273.625000 167.305000 168.874000 102.740000 94.263400 0.106999 27.870293
Gene:AT1G30520 OctamerElement:AtREG468 | OctamerElement:AtREG379 | OctamerElement:AtREG388 | OctamerElement:AtREG419 | OctamerElement:AtREG483 | OctamerElement:AtREG578 REG CTGCCACG | TGCCACGT | GCCACGTC | CCACGTCA | CACGTCAT | ACGTCATC 58.5 | 57.5 | 56.5 | 55.5 | 54.5 | 53.5 TAIR9 TAIR:At1g30520 Chr1 10810929 | 10810930 | 10810931 | 10810932 | 10810933 | 10810934 -62 | -61 | -60 | -59 | -58 | -57 10810936 | 10810937 | 10810938 | 10810939 | 10810940 | 10810941 -55 | -54 | -53 | -52 | -51 | -50 + 10810991 -48 10811039 261801_at Diurnal_Condition:LLHC 5 0.839546 103.787000 205.932000 139.403000 165.851000 94.709000 108.522000 132.478000 273.625000 167.305000 168.874000 102.740000 94.263400 0.106999 27.870293
* Row count is limited to 100.