Developmental Genomic (AtGenExpress + PPDB promoter motif) mean

Developmental Microarray Expression Data (AtGenExpress) of plant developmental tissues, combined with LDSS sequence analysis of regulatory (8mer) motif calculations (PPDB). We took the mean of triplicate measurements from AtGenExpress, then sorted the developmental series into plant organs (Flower, Leaf, Root, Stem, Fruit & Seeds), with one category for seedlings (8 days old or less) and another for whole plants (older than 8 days). For each motif, we calculated the position relative to the TSS as determined experimentally (PPDB). Gene Loci without expression data or motif data were removed from this database.

References (for PPDB):
http://www.ncbi.nlm.nih.gov/pubmed/17947329
http://www.ncbi.nlm.nih.gov/pubmed/17346352
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101

Descriptions for each data table:

AtGenExpress_PPDB_Flowering_mean	This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_PPDB_Fruit_Seeds_mean	This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_PPDB_Leaf_mean	This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_PPDB_Root_mean	This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_PPDB_Seedling_mean	This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_PPDB_Stem_mean	This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_PPDB_Whole_Plant_mean	This collection of Gene Expression Properties are associated with whole plant body parts.

License

We would like to thank Dr. Yoshiharu Yamamoto for supplying the data of PPDB (Plant Promoter Database) for PromoterCAD & GenoCon2 competition. License of this work's data is according to the intentions of the PPDB original data source.
http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/license.cgi

value

useful

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#LINK
#lang	en
#attribution_name	GenoCon
#attribution_url	http://promotercad.org
#file_name	AtGenExpress_PPDB_Root_mean
#download_from	http://linkdata.org/work/rdf1s778i
#namespace	ATTED	http://atted.jp/data/locus/
#namespace	Gene	http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace	OctamerElement	http://linkdata.org/work/rdf1s329i/Octamer_elements.html#
#namespace	PLACE	http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace	PPDB	http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace	TAIR	http://arabidopsis.org/servlets/TairObject?type=locus&name=
#namespace	genome_version	http://www.arabidopsis.org/portals/genAnnotation/gene_structural_annotation/
#property	PPDB motif	motif type	motif sequence	motif position	genome_version:annotation_data.jsp	label:Col-0_root17	label:Col-0_root_MS1	label:Col-0_root_GM-8	label:Col-0_root_GM5-8	label:Col-0_root_GM-21	label:Col-0_root_GM5-21
#object_type_xsd	string	string	string	string	string	string	string	string	string	string	string
#property_context	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion
Gene:AT1G01010	OctamerElement:AtREG514 \| OctamerElement:AtREG519	REG	TCGGTTTA \| CGGTTTAC	209.5 \| 208.5	TAIR9	1.3657	1.6181	1.5691	1.5646	1.8136	1.6882
Gene:AT1G01010	OctamerElement:AtREG473 \| OctamerElement:AtREG412 \| OctamerElement:AtREG521	REG	TTAAACCG \| TAAACCGG \| AAACCGGA	129.5 \| 128.5 \| 127.5	TAIR9	1.3657	1.6181	1.5691	1.5646	1.8136	1.6882
Gene:AT1G01010	OctamerElement:AtREG626	REG	AAACGCTG	63.5	TAIR9	1.3657	1.6181	1.5691	1.5646	1.8136	1.6882
Gene:AT1G01060	OctamerElement:AtREG623	REG	ATACCCTT	130.5	TAIR9	-1.2945	-0.8632	-0.8518	-0.8437	-0.7480	-0.7424
Gene:AT1G01060	OctamerElement:AtREG478 \| OctamerElement:AtREG366 \| OctamerElement:AtREG382 \| OctamerElement:AtREG544	REG	ACGTGTCG \| CACGTGTC \| CCACGTGT \| ACCACGTG	167.5 \| 168.5 \| 169.5 \| 170.5	TAIR9	-1.2945	-0.8632	-0.8518	-0.8437	-0.7480	-0.7424
Gene:AT1G01070	OctamerElement:AtREG462	REG	GGGCTTAT	68.5	TAIR9	1.9119	1.7917	1.0242	1.3325	1.3963	1.8666
Gene:AT1G01080	OctamerElement:AtREG375 \| OctamerElement:AtREG442 \| OctamerElement:AtREG405 \| OctamerElement:AtREG390 \| OctamerElement:AtREG617	REG	CCGACCCG \| CCCGACCC \| ACCCGACC \| GACCCGAC \| TGACCCGA	43.5 \| 44.5 \| 45.5 \| 46.5 \| 47.5	TAIR9	-2.2719	-1.9903	-2.1833	-2.0330	-2.0553	-2.1519
Gene:AT1G01080	OctamerElement:AtREG459 \| OctamerElement:AtREG359 \| OctamerElement:AtREG353 \| OctamerElement:AtREG356 \| OctamerElement:AtREG373	REG	GGCCTTTT \| GGGCCTTT \| TGGGCCTT \| TTGGGCCT \| TTTGGGCC	144.5 \| 145.5 \| 146.5 \| 147.5 \| 148.5	TAIR9	-2.2719	-1.9903	-2.1833	-2.0330	-2.0553	-2.1519
Gene:AT1G01080	OctamerElement:AtREG437 \| OctamerElement:AtREG490 \| OctamerElement:AtREG361 \| OctamerElement:AtREG643	REG	TGGGCCAT \| ATGGGCCA \| AATGGGCC \| GAATGGGC	285.5 \| 286.5 \| 287.5 \| 288.5	TAIR9	-2.2719	-1.9903	-2.1833	-2.0330	-2.0553	-2.1519
Gene:AT1G01090	OctamerElement:AtREG523	REG	GTGGGTCC	90.5	TAIR9	0.0704	0.2057	0.0647	0.1510	-0.4651	-0.6235
Gene:AT1G01100	OctamerElement:AtREG635 \| OctamerElement:AtREG403 \| OctamerElement:AtREG380	REG	GCCCATCA \| GGCCCATC \| CGGCCCAT	59.5 \| 60.5 \| 61.5	TAIR9	0.6938	0.3742	0.0536	0.0612	0.1665	0.0640
Gene:AT1G01100	OctamerElement:AtREG475 \| OctamerElement:AtREG358 \| OctamerElement:AtREG354 \| OctamerElement:AtREG361 \| OctamerElement:AtREG386	REG	GGGCCTAG \| TGGGCCTA \| ATGGGCCT \| AATGGGCC \| AAATGGGC	81.5 \| 82.5 \| 83.5 \| 84.5 \| 85.5	TAIR9	0.6938	0.3742	0.0536	0.0612	0.1665	0.0640
Gene:AT1G01100	OctamerElement:AtREG355 \| OctamerElement:AtREG352 \| OctamerElement:AtREG356 \| OctamerElement:AtREG353	REG	GCCCAATA \| GGCCCAAT \| AGGCCCAA \| AAGGCCCA	120.5 \| 121.5 \| 122.5 \| 123.5	TAIR9	0.6938	0.3742	0.0536	0.0612	0.1665	0.0640
Gene:AT1G01100	OctamerElement:AtREG533 \| OctamerElement:AtREG469 \| OctamerElement:AtREG421	REG	TTGGGCTC \| TTTGGGCT \| ATTTGGGC	164.5 \| 165.5 \| 166.5	TAIR9	0.6938	0.3742	0.0536	0.0612	0.1665	0.0640
Gene:AT1G01100	OctamerElement:AtREG632	REG	AAAGTCAA	182.5	TAIR9	0.6938	0.3742	0.0536	0.0612	0.1665	0.0640
Gene:AT1G01110	OctamerElement:AtREG599	REG	GGTGTCGT	164.5	TAIR9	0.2266	-0.2235	-0.1021	-0.1864	-0.5250	-0.5581
Gene:AT1G01120	OctamerElement:AtREG620	REG	CCCATATA	168.5	TAIR9	-0.8304	0.5866	0.2000	0.6230	0.3593	0.3207
Gene:AT1G01130	OctamerElement:AtREG611 \| OctamerElement:AtREG417 \| OctamerElement:AtREG355	REG	CCAATAAG \| CCCAATAA \| GCCCAATA	83.5 \| 84.5 \| 85.5	TAIR9	-0.7697	-0.7630	-0.8314	-0.7422	-1.0648	-0.9618
Gene:AT1G01140	OctamerElement:AtREG395	REG	GCGCGTGA	52.5	TAIR9	-3.5983	-3.2126	-4.1932	-3.8473	-4.4004	-4.1450
Gene:AT1G01140	OctamerElement:AtREG523 \| OctamerElement:AtREG615	REG	GGACCCAC \| GGGACCCA	65.5 \| 66.5	TAIR9	-3.5983	-3.2126	-4.1932	-3.8473	-4.4004	-4.1450
Gene:AT1G01140	OctamerElement:AtREG448 \| OctamerElement:AtREG379 \| OctamerElement:AtREG413	REG	CGTGGCAT \| ACGTGGCA \| TACGTGGC	76.5 \| 77.5 \| 78.5	TAIR9	-3.5983	-3.2126	-4.1932	-3.8473	-4.4004	-4.1450
Gene:AT1G01160	OctamerElement:AtREG507 \| OctamerElement:AtREG504 \| OctamerElement:AtREG354 \| OctamerElement:AtREG353 \| OctamerElement:AtREG351 \| OctamerElement:AtREG577	REG	CCATGGGC \| CATGGGCC \| ATGGGCCT \| TGGGCCTT \| GGGCCTTA \| GGCCTTAG	215.5 \| 214.5 \| 213.5 \| 212.5 \| 211.5 \| 210.5	TAIR9	-0.1529	-0.1242	-0.1632	-0.3854	-0.1361	-0.1996
Gene:AT1G01160	OctamerElement:AtREG563 \| OctamerElement:AtREG360 \| OctamerElement:AtREG358 \| OctamerElement:AtREG356 \| OctamerElement:AtREG373 \| OctamerElement:AtREG421	REG	CTTAGGCC \| TTAGGCCC \| TAGGCCCA \| AGGCCCAA \| GGCCCAAA \| GCCCAAAT	196.5 \| 195.5 \| 194.5 \| 193.5 \| 192.5 \| 191.5	TAIR9	-0.1529	-0.1242	-0.1632	-0.3854	-0.1361	-0.1996
Gene:AT1G01160	OctamerElement:AtREG446 \| OctamerElement:AtREG484 \| OctamerElement:AtREG420 \| OctamerElement:AtREG373 \| OctamerElement:AtREG421	REG	ATTGGCCC \| TTGGCCCA \| TGGCCCAA \| GGCCCAAA \| GCCCAAAT	168.5 \| 167.5 \| 166.5 \| 165.5 \| 164.5	TAIR9	-0.1529	-0.1242	-0.1632	-0.3854	-0.1361	-0.1996
Gene:AT1G01170	OctamerElement:AtREG386	REG	GCCCATTT	63.5	TAIR9	-2.4883	-2.3121	-1.7107	-1.9609	-0.8098	-1.5417
Gene:AT1G01180	OctamerElement:AtREG470 \| OctamerElement:AtREG557 \| OctamerElement:AtREG632	REG	AGACACGT \| GACACGTA \| AAAGTCAA	164.5 \| 163.5 \| 156.5	TAIR9	-0.0496	-0.0488	-0.0573	0.0218	0.1122	-0.0336
Gene:AT1G01230	OctamerElement:AtREG424	REG	GGCCTATT	101.5	TAIR9	0.4825	0.7461	0.3954	0.5556	0.2695	0.2987
Gene:AT1G01240	OctamerElement:AtREG590 \| OctamerElement:AtREG590	REG	AACACGTG \| CACGTGTT	133.5 \| 131.5	TAIR9	-0.0771	-0.3315	-0.1793	-0.3043	0.0564	0.0371
Gene:AT1G01240	OctamerElement:AtREG527 \| OctamerElement:AtREG569 \| OctamerElement:AtREG520	REG	GTGTCGTT \| TGTCGTTT \| GTCGTTTT	72.5 \| 71.5 \| 70.5	TAIR9	-0.0771	-0.3315	-0.1793	-0.3043	0.0564	0.0371
Gene:AT1G01260	OctamerElement:AtREG636	REG	TAAGGGGT	171.5	TAIR9	-0.2669	-0.2868	-0.1037	-0.2324	0.0804	0.0253
Gene:AT1G01260	OctamerElement:AtREG463 \| OctamerElement:AtREG455 \| OctamerElement:AtREG412 \| OctamerElement:AtREG473	REG	GACCCGGT \| ACCCGGTT \| CCGGTTTA \| CGGTTTAA	114.5 \| 113.5 \| 111.5 \| 110.5	TAIR9	-0.2669	-0.2868	-0.1037	-0.2324	0.0804	0.0253
Gene:AT1G01320	OctamerElement:AtREG411	REG	AGAGGCCC	144.5	TAIR9	-3.9094	-4.0749	-2.5955	-3.4616	-3.0461	-3.5670
Gene:AT1G01320	OctamerElement:AtREG396 \| OctamerElement:AtREG357 \| OctamerElement:AtREG361 \| OctamerElement:AtREG354 \| OctamerElement:AtREG358 \| OctamerElement:AtREG360 \| OctamerElement:AtREG563	REG	CCCATTAA \| GCCCATTA \| GGCCCATT \| AGGCCCAT \| TAGGCCCA \| TTAGGCCC \| CTTAGGCC	159.5 \| 160.5 \| 161.5 \| 162.5 \| 163.5 \| 164.5 \| 165.5	TAIR9	-3.9094	-4.0749	-2.5955	-3.4616	-3.0461	-3.5670
Gene:AT1G01370	OctamerElement:AtREG642	REG	AGGGGTAA	224.5	TAIR9	0.3524	-0.1709	-0.7136	-0.6451	-1.0490	-0.9098
Gene:AT1G01430	OctamerElement:AtREG608	REG	AAGCCACG	199.5	TAIR9	-0.1207	-0.1566	-0.0030	0.0593	-0.4728	-0.7608
Gene:AT1G01470	OctamerElement:AtREG638	REG	GACCGACT	65.5	TAIR9	1.6447	1.3346	1.1364	1.5480	1.0254	1.0872
Gene:AT1G01470	OctamerElement:AtREG588	REG	TCACACGT	108.5	TAIR9	1.6447	1.3346	1.1364	1.5480	1.0254	1.0872
Gene:AT1G01470	OctamerElement:AtREG557 \| OctamerElement:AtREG470	REG	GACACGTA \| AGACACGT	151.5 \| 152.5	TAIR9	1.6447	1.3346	1.1364	1.5480	1.0254	1.0872
Gene:AT1G01480	OctamerElement:AtREG591	REG	CCCATGGG	74.5	TAIR9	0.3480	0.3566	0.0958	0.0984	-0.4070	-0.1168
Gene:AT1G01490	OctamerElement:AtREG395	REG	TCACGCGC	209.5	TAIR9	-0.9010	0.1757	0.2832	0.4983	0.5044	0.3589
Gene:AT1G01490	OctamerElement:AtREG486	REG	CACGCGCC	222.5	TAIR9	-0.9010	0.1757	0.2832	0.4983	0.5044	0.3589
Gene:AT1G01500	OctamerElement:AtREG426 \| OctamerElement:AtREG378 \| OctamerElement:AtREG372 \| OctamerElement:AtREG386 \| OctamerElement:AtREG443 \| OctamerElement:AtREG610	REG	TAAGCCCA \| AAGCCCAT \| AGCCCATT \| GCCCATTT \| CCCATTTA \| TTTAACGG	221.5 \| 220.5 \| 219.5 \| 218.5 \| 217.5 \| 213.5	TAIR9	-0.6953	-0.1931	-0.2066	-0.3500	-0.1677	-0.3290
Gene:AT1G01500	OctamerElement:AtREG437 \| OctamerElement:AtREG458 \| OctamerElement:AtREG384	REG	ATGGCCCA \| TGGCCCAG \| GGCCCAGT	191.5 \| 190.5 \| 189.5	TAIR9	-0.6953	-0.1931	-0.2066	-0.3500	-0.1677	-0.3290
Gene:AT1G01500	OctamerElement:AtREG589	REG	AAAAAGCC	156.5	TAIR9	-0.6953	-0.1931	-0.2066	-0.3500	-0.1677	-0.3290
Gene:AT1G01500	OctamerElement:AtREG588 \| OctamerElement:AtREG460 \| OctamerElement:AtREG541	REG	TCACACGT \| CACACGTG \| CACGTGCG	137.5 \| 136.5 \| 134.5	TAIR9	-0.6953	-0.1931	-0.2066	-0.3500	-0.1677	-0.3290
Gene:AT1G01500	OctamerElement:AtREG567 \| OctamerElement:AtREG602	REG	AGGGTATT \| GGGTATTT	110.5 \| 109.5	TAIR9	-0.6953	-0.1931	-0.2066	-0.3500	-0.1677	-0.3290
Gene:AT1G01500	OctamerElement:AtREG592	REG	TTTGACCC	80.5	TAIR9	-0.6953	-0.1931	-0.2066	-0.3500	-0.1677	-0.3290
Gene:AT1G01500	OctamerElement:AtREG646	REG	CGTAATTA	69.5	TAIR9	-0.6953	-0.1931	-0.2066	-0.3500	-0.1677	-0.3290
Gene:AT1G01510	OctamerElement:AtREG540 \| OctamerElement:AtREG537 \| OctamerElement:AtREG439 \| OctamerElement:AtREG415 \| OctamerElement:AtREG565	REG	ACGGCGTC \| GGCGTCGT \| GCGTCGTT \| CGTCGTTT \| GTCGTTTA	208.5 \| 206.5 \| 205.5 \| 204.5 \| 203.5	TAIR9	0.5348	0.0718	0.3241	0.1202	0.1647	0.0393
Gene:AT1G01510	OctamerElement:AtREG578	REG	GATGACGT	179.5	TAIR9	0.5348	0.0718	0.3241	0.1202	0.1647	0.0393
Gene:AT1G01510	OctamerElement:AtREG529 \| OctamerElement:AtREG373 \| OctamerElement:AtREG392 \| OctamerElement:AtREG400	REG	TTTTGGGC \| TTTGGGCC \| TTGGGCCC \| TGGGCCCT	112.5 \| 111.5 \| 110.5 \| 109.5	TAIR9	0.5348	0.0718	0.3241	0.1202	0.1647	0.0393
Gene:AT1G01540	OctamerElement:AtREG630	REG	CGACATCG	155.5	TAIR9	-0.4953	-0.6614	-0.6705	-0.6746	-0.7510	-0.7698
Gene:AT1G01550	OctamerElement:AtREG632	REG	TTGACTTT	194.5	TAIR9	0.5405	0.2980	0.3693	0.1437	0.8952	0.8175
Gene:AT1G01560	OctamerElement:AtREG507	REG	CCATGGGC	203.5	TAIR9	-0.8698	-0.4279	-1.5918	-1.1823	-1.0430	-0.9715
Gene:AT1G01620	OctamerElement:AtREG553 \| OctamerElement:AtREG554	REG	CAACGGTC \| TCCAACGG	444.5 \| 446.5	TAIR9	1.4282	0.7399	1.1646	0.7890	1.0478	0.5288
Gene:AT1G01620	OctamerElement:AtREG475	REG	CTAGGCCC	525.5	TAIR9	1.4282	0.7399	1.1646	0.7890	1.0478	0.5288
Gene:AT1G01630	OctamerElement:AtREG440 \| OctamerElement:AtREG419 \| OctamerElement:AtREG485	REG	CTGACGTG \| TGACGTGG \| TGGGCTCA	208.5 \| 207.5 \| 202.5	TAIR9	0.0515	0.5644	0.3043	0.5458	0.1362	0.1879
Gene:AT1G01630	OctamerElement:AtREG531	REG	AAAACGGC	187.5	TAIR9	0.0515	0.5644	0.3043	0.5458	0.1362	0.1879
Gene:AT1G01630	OctamerElement:AtREG533 \| OctamerElement:AtREG402 \| OctamerElement:AtREG355 \| OctamerElement:AtREG624	REG	GAGCCCAA \| AGCCCAAT \| GCCCAATA \| CCCAATAG	104.5 \| 103.5 \| 102.5 \| 101.5	TAIR9	0.0515	0.5644	0.3043	0.5458	0.1362	0.1879
Gene:AT1G01630	OctamerElement:AtREG425 \| OctamerElement:AtREG351 \| OctamerElement:AtREG353 \| OctamerElement:AtREG356 \| OctamerElement:AtREG352 \| OctamerElement:AtREG355	REG	ATAAGGCC \| TAAGGCCC \| AAGGCCCA \| AGGCCCAA \| GGCCCAAT \| GCCCAATA	87.5 \| 86.5 \| 85.5 \| 84.5 \| 83.5 \| 82.5	TAIR9	0.0515	0.5644	0.3043	0.5458	0.1362	0.1879
Gene:AT1G01650	OctamerElement:AtREG564 \| OctamerElement:AtREG626	REG	GCGTTTTA \| CAGCGTTT	1082.5 \| 1084.5	TAIR9	0.2069	-0.3238	-0.2252	-0.3360	-0.1112	-0.2699
Gene:AT1G01650	OctamerElement:AtREG632	REG	AAAGTCAA	1095.5	TAIR9	0.2069	-0.3238	-0.2252	-0.3360	-0.1112	-0.2699
Gene:AT1G01650	OctamerElement:AtREG486	REG	CACGCGCC	1129.5	TAIR9	0.2069	-0.3238	-0.2252	-0.3360	-0.1112	-0.2699
Gene:AT1G01650	OctamerElement:AtREG536	REG	ACACGCGT	1139.5	TAIR9	0.2069	-0.3238	-0.2252	-0.3360	-0.1112	-0.2699
Gene:AT1G01650	OctamerElement:AtREG449 \| OctamerElement:AtREG420 \| OctamerElement:AtREG484	REG	GGCCCAAC \| TGGCCCAA \| TTGGCCCA	182.5 \| 183.5 \| 184.5	TAIR9	0.2069	-0.3238	-0.2252	-0.3360	-0.1112	-0.2699
Gene:AT1G01670	OctamerElement:AtREG428 \| OctamerElement:AtREG478 \| OctamerElement:AtREG481 \| OctamerElement:AtREG517 \| OctamerElement:AtREG466 \| OctamerElement:AtREG489	REG	CGTGTCGT \| ACGTGTCG \| GACGTGTC \| TGACGTGT \| GTGACGTG \| CGTGACGT	62.5 \| 63.5 \| 64.5 \| 65.5 \| 66.5 \| 67.5	TAIR9	0.2189	-0.0639	-0.1049	-0.1049	0.2454	0.2076
Gene:AT1G01690	OctamerElement:AtREG417	REG	TTATTGGG	188.5	TAIR9	-0.2268	-0.1247	-0.2578	-0.2060	-0.1691	-0.0384
Gene:AT1G01690	OctamerElement:AtREG364 \| OctamerElement:AtREG490 \| OctamerElement:AtREG437	REG	TATGGGCC \| ATGGGCCA \| TGGGCCAT	169.5 \| 168.5 \| 167.5	TAIR9	-0.2268	-0.1247	-0.2578	-0.2060	-0.1691	-0.0384
Gene:AT1G01690	OctamerElement:AtREG558 \| OctamerElement:AtREG357 \| OctamerElement:AtREG372 \| OctamerElement:AtREG378 \| OctamerElement:AtREG376 \| OctamerElement:AtREG365 \| OctamerElement:AtREG601 \| OctamerElement:AtREG394 \| OctamerElement:AtREG364 \| OctamerElement:AtREG354 \| OctamerElement:AtREG447 \| OctamerElement:AtREG411	REG	CTAATGGG \| TAATGGGC \| AATGGGCT \| ATGGGCTT \| TGGGCTTT \| GGGCTTTA \| GGCTTTAT \| TTATGGGC \| TATGGGCC \| ATGGGCCT \| TGGGCCTC \| GGGCCTCT	149.5 \| 148.5 \| 147.5 \| 146.5 \| 145.5 \| 144.5 \| 143.5 \| 139.5 \| 138.5 \| 137.5 \| 136.5 \| 135.5	TAIR9	-0.2268	-0.1247	-0.2578	-0.2060	-0.1691	-0.0384
Gene:AT1G01710	OctamerElement:AtREG504 \| OctamerElement:AtREG490 \| OctamerElement:AtREG437	REG	CATGGGCC \| ATGGGCCA \| TGGGCCAT	277.5 \| 276.5 \| 275.5	TAIR9	-0.5860	-0.5661	-0.4417	-0.2641	-0.2300	-0.1981
Gene:AT1G01710	OctamerElement:AtREG416 \| OctamerElement:AtREG416 \| OctamerElement:AtREG545	REG	TTAAGGCC \| GGCCTTAA \| TTAAAGCC	239.5 \| 235.5 \| 231.5	TAIR9	-0.5860	-0.5661	-0.4417	-0.2641	-0.2300	-0.1981
Gene:AT1G01710	OctamerElement:AtREG396 \| OctamerElement:AtREG357 \| OctamerElement:AtREG361 \| OctamerElement:AtREG354 \| OctamerElement:AtREG353 \| OctamerElement:AtREG398	REG	TTAATGGG \| TAATGGGC \| AATGGGCC \| ATGGGCCT \| TGGGCCTT \| GGGCCTTG	222.5 \| 221.5 \| 220.5 \| 219.5 \| 218.5 \| 217.5	TAIR9	-0.5860	-0.5661	-0.4417	-0.2641	-0.2300	-0.1981
Gene:AT1G01710	OctamerElement:AtREG590 \| OctamerElement:AtREG628	REG	AACACGTG \| ACACGTGA	93.5 \| 92.5	TAIR9	-0.5860	-0.5661	-0.4417	-0.2641	-0.2300	-0.1981
Gene:AT1G01710	OctamerElement:AtREG575	REG	CGAACCGA	71.5	TAIR9	-0.5860	-0.5661	-0.4417	-0.2641	-0.2300	-0.1981
Gene:AT1G01710	OctamerElement:AtREG513	REG	GTCCACGT	63.5	TAIR9	-0.5860	-0.5661	-0.4417	-0.2641	-0.2300	-0.1981
Gene:AT1G01710	OctamerElement:AtREG598 \| OctamerElement:AtREG412 \| OctamerElement:AtREG521	REG	ATAAACCG \| TAAACCGG \| AAACCGGA	47.5 \| 46.5 \| 45.5	TAIR9	-0.5860	-0.5661	-0.4417	-0.2641	-0.2300	-0.1981
Gene:AT1G01720	OctamerElement:AtREG644	REG	ACCGGAAA	280.5	TAIR9	1.1808	0.2783	0.6188	0.3055	0.8278	1.2113
Gene:AT1G01720	OctamerElement:AtREG451	REG	GGTTCGGT	242.5	TAIR9	1.1808	0.2783	0.6188	0.3055	0.8278	1.2113
Gene:AT1G01720	OctamerElement:AtREG576 \| OctamerElement:AtREG569	REG	GAAACGAC \| AAACGACA	183.5 \| 182.5	TAIR9	1.1808	0.2783	0.6188	0.3055	0.8278	1.2113
Gene:AT1G01720	OctamerElement:AtREG471 \| OctamerElement:AtREG371 \| OctamerElement:AtREG388 \| OctamerElement:AtREG419 \| OctamerElement:AtREG440 \| OctamerElement:AtREG515	REG	TCGCCACG \| CGCCACGT \| GCCACGTC \| CCACGTCA \| CACGTCAG \| ACGTCAGC	146.5 \| 145.5 \| 144.5 \| 143.5 \| 142.5 \| 141.5	TAIR9	1.1808	0.2783	0.6188	0.3055	0.8278	1.2113
Gene:AT1G01720	OctamerElement:AtREG472	REG	ACGTGTCC	113.5	TAIR9	1.1808	0.2783	0.6188	0.3055	0.8278	1.2113
Gene:AT1G01720	OctamerElement:AtREG464 \| OctamerElement:AtREG382 \| OctamerElement:AtREG460	REG	CCCACGTG \| CCACGTGT \| CACGTGTG	90.5 \| 89.5 \| 88.5	TAIR9	1.1808	0.2783	0.6188	0.3055	0.8278	1.2113
Gene:AT1G01720	OctamerElement:AtREG478 \| OctamerElement:AtREG366 \| OctamerElement:AtREG366 \| OctamerElement:AtREG472	REG	CGACACGT \| GACACGTG \| CACGTGTC \| ACGTGTCC	50.5 \| 49.5 \| 47.5 \| 46.5	TAIR9	1.1808	0.2783	0.6188	0.3055	0.8278	1.2113
Gene:AT1G01730	OctamerElement:AtREG520 \| OctamerElement:AtREG569 \| OctamerElement:AtREG527	REG	GTCGTTTT \| AAACGACA \| AACGACAC	169.5 \| 168.5 \| 167.5	TAIR9	0.2115	0.0393	0.1597	-0.0077	0.4700	0.3957

* Row count is limited to 100.

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Developmental Genomic (AtGenExpress + PPDB promoter motif) mean