AtGenExpress_ATTED_Flowering |
This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_ATTED_Fruit_Seeds |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_ATTED_Leaf |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_ATTED_Root |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_ATTED_Seedling |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_ATTED_Stem |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_ATTED_Whole_Plant |
This collection of Gene Expression Properties are associated with whole plant body parts. |
value
#LINK | ||||||||
#lang | en | |||||||
#attribution_name | GenoCon | |||||||
#attribution_url | http://promotercad.org | |||||||
#license | http://creativecommons.org/licenses/by/3.0/deed.en | |||||||
#file_name | AtGenExpress_ATTED_Stem | |||||||
#download_from | http://linkdata.org/work/rdf1s781i | |||||||
#namespace | ATTED | http://atted.jp/data/locus/ | ||||||
#namespace | HeptamerElement | http://linkdata.org/work/rdf1s328i/Heptamer_elements.html# | ||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | ||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | ||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | ||||||
#property | motif | motif sequence | motif position | CEG | Origin of baseline sequence | label:Col-0_lf7_petio | label:Col-0_stem_2nd | label:Col-0_stem_1st |
#object_type_xsd | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
ATTED:At1g01030.html | - | - | - | - | TAIR9 | -0.4347 | -0.5317 | -0.5427 | -1.038 | -0.6408 | -0.5252 | -0.8866 | -0.5981 | -0.8056 |
ATTED:At1g01050.html | HeptamerElement:ATATAAA | ATATAAA | 65 | 0.08 | PPDB | 0.3595 | 0.4228 | 0.4356 | 0.4864 | 0.4213 | 0.4889 | 0.6465 | 0.5465 | 0.5424 |
ATTED:At1g01060.html | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | ACGTGTC | CACGTGT | CCACGTG | 168 | 169 | 170 | 0.09 | 0.10 | 0.07 | PPDB | -0.541 | -0.5574 | -0.6509 | 1.5826 | 1.699 | 1.6486 | -0.3161 | -0.3113 | -0.3669 |
ATTED:At1g01070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT | ATAAATA | TATAAAT | AAAATAT | AAAATAT | 113 | 114 | 183 | 524 | 0.08 | 0.10 | 0.07 | 0.07 | PPDB | 0.5741 | 0.9806 | 0.8701 | 1.7056 | 1.35 | 1.1232 | 2.2048 | 2.0998 | 2.1661 |
ATTED:At1g01080.html | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | ATGGGCC | AATGGGC | 287 | 288 | 0.08 | 0.09 | PPDB | 0.8633 | 1.1913 | 1.2621 | -0.719 | -0.7622 | -0.564 | -0.4777 | -0.447 | -0.4642 |
ATTED:At1g01090.html | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAA | ATATATA | TATATAT | ATATATA | 43 | 44 | 45 | 46 | 0.11 | 0.10 | 0.10 | 0.10 | PPDB | -0.0344 | -0.0139 | 0.0513 | -0.6197 | -0.6486 | -0.6188 | -0.3381 | -0.5289 | -0.4401 |
ATTED:At1g01100.html | HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA | TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA | 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 | PPDB | -0.1717 | -0.0486 | -0.0983 | -0.9575 | -1.1532 | -1.0168 | -0.2131 | -0.3685 | -0.3206 |
ATTED:At1g01110.html | - | - | - | - | PPDB | 0.1781 | 0.0935 | 0.1471 | -0.2402 | -0.1759 | 0.0343 | 0.038 | -0.0845 | -0.1908 |
ATTED:At1g01130.html | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT | AAGCCCA | AAAGCCC | GCCCAAT | 36 | 37 | 86 | 0.07 | 0.06 | 0.07 | PPDB | -0.5263 | -0.2453 | -0.4628 | -0.2031 | 0.051 | 0.0156 | 0.185 | 0.0237 | 0.0964 |
ATTED:At1g01140.html | HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA | ACGTGGC | ACGCGGA | 78 | 113 | 0.07 | 0.07 | PPDB | 0.1685 | 0.2073 | 0.1882 | 0.1096 | 0.0895 | 0.1478 | 0.1301 | -0.0971 | 0.1103 |
ATTED:At1g01150.html | HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | AAACCCT | AAACCCT | TAAACCC | 382 | 407 | 408 | 0.14 | 0.14 | 0.10 | TAIR9 | 0.0437 | -0.1089 | -0.0733 | -0.1297 | -0.0712 | -0.0889 | -0.1365 | 0.0632 | -0.2525 |
ATTED:At1g01160.html | HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT | GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT | 166 | 193 | 194 | 212 | 0.07 | 0.07 | 0.07 | 0.06 | PPDB | -1.0307 | -1.1283 | -0.9972 | -0.6796 | -0.4878 | -0.3494 | -0.446 | -0.468 | -0.4228 |
ATTED:At1g01170.html | HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT | GATAAGA | AGATAAG | TTATCCA | GCCCATT | 18 | 19 | 38 | 64 | 0.06 | 0.06 | 0.09 | 0.10 | PPDB | 0.2181 | 0.8092 | 0.7376 | 0.2681 | 0.0958 | 0.3062 | 0.4117 | 0.3186 | 0.476 |
ATTED:At1g01200.html | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | ATATAAA | ATATAAA | ATATAAA | 38 | 298 | 322 | 0.08 | 0.08 | 0.08 | TAIR9 | 0.1628 | 0.9442 | 0.5434 | 0.103 | 0.0983 | 0.5498 | 1.1176 | 0.951 | 1.2279 |
ATTED:At1g01220.html | HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | CTCCAGA | TGACTTT | TTGACTT | TTTGACT | 43 | 108 | 109 | 110 | 0.06 | 0.06 | 0.07 | 0.07 | TAIR9 | 0.4183 | 0.3768 | 0.3527 | 0.5223 | 0.5584 | 0.5121 | 0.7168 | 0.7856 | 0.6087 |
ATTED:At1g01225.html | HeptamerElement:TCTCTAG | TCTCTAG | 95 | 0.06 | TAIR9 | -0.3053 | -0.2672 | -0.329 | -0.4065 | -0.1064 | -0.4853 | 0.1683 | 0.2226 | 0.247 |
ATTED:At1g01230.html | HeptamerElement:AAATATC | AAATATC | 43 | 0.13 | PPDB | 0.1994 | 0.5103 | 0.5858 | 0.7507 | 0.6769 | 0.6737 | 0.5926 | 0.6914 | 0.5931 |
ATTED:At1g01240.html | HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG | CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG | 117 | 132 | 133 | 477 | 478 | 518 | 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 | PPDB | 0.0978 | 0.0099 | 0.1426 | 1.144 | 1.2216 | 1.0609 | 0.7249 | 0.6266 | 0.6267 |
ATTED:At1g01280.html | HeptamerElement:TATATAT | TATATAT | 39 | 0.10 | TAIR9 | -0.2829 | -0.1693 | -0.4154 | -0.2926 | -0.2535 | -0.3991 | -0.539 | -0.4725 | -0.4515 |
ATTED:At1g01290.html | HeptamerElement:AACCCTA | AACCCTA | 32 | 0.13 | TAIR9 | -0.0707 | -0.0054 | -0.0981 | 0.5395 | 0.6551 | 0.4066 | 0.4675 | 0.2813 | 0.5945 |
ATTED:At1g01300.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA | GATATTT | AGATATT | TTATCCA | 128 | 129 | 177 | 0.10 | 0.10 | 0.06 | PPDB | -0.1504 | -0.1244 | 0.0639 | -1.0616 | -0.9499 | -1.1639 | 0.7035 | 0.7984 | 0.6765 |
ATTED:At1g01310.html | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA | TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA | 52 | 53 | 54 | 60 | 61 | 0.06 | 0.07 | 0.06 | 0.06 | 0.07 | TAIR9 | -0.4919 | -0.5673 | -0.3234 | -0.4865 | -0.4214 | -0.4211 | -0.6331 | -0.6171 | -0.6218 |
ATTED:At1g01320.html | - | - | - | - | PPDB | 0.4072 | 0.3616 | 0.3001 | -0.6009 | -0.6255 | -0.5331 | -0.9154 | -0.8901 | -0.8791 |
ATTED:At1g01430.html | HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT | CATGCAA | CCGACAT | AATATCT | 150 | 191 | 223 | 0.08 | 0.06 | 0.07 | PPDB | 0.4069 | 0.5824 | 0.4955 | 1.4065 | 1.4021 | 1.5458 | 1.0772 | 1.0473 | 1.1668 |
ATTED:At1g01440.html | - | - | - | - | PPDB | -0.3014 | 0.0607 | 0.0658 | 0.4646 | 0.5293 | 0.7413 | -0.3795 | -0.0532 | -0.1127 |
ATTED:At1g01470.html | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC | AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC | 115 | 116 | 152 | 153 | 233 | 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | PPDB | 2.1584 | 2.0208 | 1.9818 | 1.2722 | 1.1788 | 1.3207 | 2.5183 | 2.4409 | 2.5431 |
ATTED:At1g01480.html | HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA | TATATAA | ATATAAA | TATATAA | CTATATA | 27 | 331 | 332 | 333 | 0.10 | 0.08 | 0.10 | 0.13 | PPDB | -0.4804 | -0.5065 | -0.5035 | -0.6678 | -0.5624 | -0.529 | -0.6881 | -0.6146 | -0.6208 |
ATTED:At1g01490.html | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.0835 | 0.0254 | -0.0184 | 0.5 | 0.6303 | 0.5416 | 0.8457 | 0.8965 | 0.8559 |
ATTED:At1g01500.html | HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG | AAACCCT | AATATCT | AAATATC | ACACGTG | 5 | 13 | 14 | 136 | 0.14 | 0.11 | 0.11 | 0.08 | PPDB | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
ATTED:At1g01510.html | HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC | TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC | 12 | 44 | 45 | 46 | 111 | 0.07 | 0.08 | 0.10 | 0.13 | 0.09 | PPDB | 0.0815 | 0.0367 | 0.0576 | 0.1782 | 0.0838 | -0.0115 | 0.4776 | 0.3662 | 0.3958 |
ATTED:At1g01520.html | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | CACGTGT | ACACGTG | 64 | 65 | 0.08 | 0.08 | TAIR9 | -0.0846 | -0.2812 | -0.1037 | -0.2085 | 0.2747 | -0.3628 | -0.1523 | -0.1777 | -0.2259 |
ATTED:At1g01540.html | HeptamerElement:CATGCAA | HeptamerElement:CCACACA | CATGCAA | CCACACA | 38 | 43 | 0.08 | 0.07 | PPDB | 0.584 | 0.4525 | 0.72 | -0.2272 | -0.2105 | -0.1349 | 0.1254 | 0.0402 | 0.1091 |
ATTED:At1g01550.html | HeptamerElement:CGTCACA | CGTCACA | 107 | 0.06 | PPDB | -0.1782 | -0.2504 | -0.0628 | 0.6675 | 0.6154 | 0.6675 | 0.1696 | 0.2844 | 0.1946 |
ATTED:At1g01560.html | - | - | - | - | PPDB | 1.4287 | 1.4729 | 1.4138 | -0.5627 | -0.5717 | -0.2001 | -0.5257 | -0.4725 | -0.6527 |
ATTED:At1g01600.html | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA | 27 | 28 | 29 | 524 | 525 | 526 | 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 | PPDB | -1.8311 | -1.8046 | -1.9028 | -0.3377 | -0.5948 | -0.2616 | 0.595 | 0.6035 | 0.6197 |
ATTED:At1g01610.html | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC | CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC | 24 | 34 | 52 | 71 | 72 | 0.06 | 0.06 | 0.06 | 0.09 | 0.06 | PPDB | -0.5873 | -0.5183 | -0.4607 | -1.3619 | -1.19 | -1.1243 | -0.838 | -0.8455 | -0.7916 |
ATTED:At1g01620.html | HeptamerElement:TTATCCA | TTATCCA | 135 | 0.09 | PPDB | 0.6155 | 0.643 | 0.6103 | 0.8442 | 0.8863 | 0.866 | 0.8756 | 0.8978 | 0.9163 |
ATTED:At1g01630.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | 83 | 84 | 85 | 86 | 103 | 0.07 | 0.07 | 0.10 | 0.08 | 0.07 | PPDB | 0.057 | -0.1043 | -0.147 | -0.2993 | -0.4364 | -0.218 | -1.1529 | -1.1701 | -1.1009 |
ATTED:At1g01650.html | - | - | - | - | PPDB | -0.429 | -0.4633 | -0.4582 | -0.0495 | 0.0161 | -9e-04 | 0.0951 | 0.1226 | 0.0166 |
ATTED:At1g01670.html | HeptamerElement:ACGTGTC | ACGTGTC | 64 | 0.10 | PPDB | 0.1649 | -0.0471 | 0.0984 | 0.1499 | 0.1718 | 0.1424 | 0.0555 | 0.3222 | 0.0715 |
ATTED:At1g01710.html | HeptamerElement:ACACGTG | ACACGTG | 93 | 0.09 | PPDB | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
ATTED:At1g01720.html | HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC | 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 | 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 | PPDB | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |
ATTED:At1g01730.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC | 96 | 97 | 98 | 99 | 110 | 0.07 | 0.08 | 0.11 | 0.08 | 0.08 | PPDB | -0.6362 | -0.3772 | -0.4467 | 1.1477 | 1.0681 | 1.1027 | 0.3074 | 0.4606 | 0.3984 |
ATTED:At1g01740.html | - | - | - | - | TAIR9 | -0.0569 | -0.22 | -0.2402 | 0.1565 | 0.4033 | 0.2413 | -0.1286 | -0.2042 | -0.1295 |
ATTED:At1g01770.html | HeptamerElement:ATATATA | HeptamerElement:TATATAT | ATATATA | TATATAT | 57 | 58 | 0.09 | 0.09 | PPDB | 0.2056 | 0.0099 | 0.1155 | 0.3261 | 0.5177 | 0.2895 | -0.049 | -0.1334 | -0.172 |
ATTED:At1g01790.html | - | - | - | - | PPDB | 0.7181 | 0.4925 | 0.6834 | 0.2154 | 0.2443 | 0.154 | 0.1402 | 0.057 | 0.0057 |
ATTED:At1g01820.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 33 | 34 | 0.09 | 0.09 | PPDB | -0.3226 | -0.2058 | -0.1334 | 0.3141 | 0.41 | 0.3844 | 0.1944 | 0.1349 | 0.0941 |
ATTED:At1g01840.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 | 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.3131 | -0.1848 | -0.356 | -0.5188 | -0.4739 | -0.1531 | -0.3389 | -0.0925 | -0.025 |
ATTED:At1g01860.html | - | - | - | - | PPDB | 0.1988 | 0.276 | 0.0883 | -0.2418 | -0.4196 | -0.1993 | -0.5879 | -0.3545 | -0.4057 |
ATTED:At1g01900.html | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | 46 | 47 | 48 | 49 | 113 | 236 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | PPDB | 1.0847 | 0.9408 | 0.9721 | 1.3902 | 1.5836 | 1.4745 | 1.5844 | 1.4769 | 1.6114 |
ATTED:At1g01920.html | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC | 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 | 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 | PPDB | -0.1795 | -0.1269 | -0.1721 | -0.3246 | -0.5203 | -0.3625 | -0.1685 | -0.2565 | -0.3001 |
ATTED:At1g01930.html | HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT | ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT | 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 | 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 | PPDB | -0.0913 | -0.3972 | -0.5368 | -0.1433 | -0.1566 | 0.0274 | -0.0528 | -0.2226 | -0.2343 |
ATTED:At1g01940.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT | 111 | 112 | 113 | 114 | 122 | 123 | 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 | PPDB | 0.0871 | 0.2795 | 0.1452 | -0.284 | -0.4236 | -0.2963 | -0.0611 | -0.0687 | -0.1729 |
ATTED:At1g01950.html | HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT | AAAATAT | CTCTCTT | 20 | 169 | 0.07 | 0.06 | PPDB | -0.172 | -0.0011 | -0.0804 | -0.2645 | -0.2888 | -0.2789 | 0.0815 | 0.1544 | 0.1221 |
ATTED:At1g01970.html | HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC | 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 | 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 | PPDB | 0.0184 | 0.0636 | 0.0379 | -0.1502 | -0.1376 | 0.0807 | 0.0842 | 0.0895 | 0.0641 |
ATTED:At1g01990.html | HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT | 37 | 61 | 62 | 63 | 74 | 123 | 124 | 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 | PPDB | -0.2722 | 0.0676 | -0.0594 | 0.2096 | 0.1521 | 0.2493 | -0.1071 | -0.1784 | -0.0699 |
ATTED:At1g02020.html | HeptamerElement:TGCCGAC | TGCCGAC | 118 | 0.08 | PPDB | -0.2372 | -0.2676 | -0.3008 | 0.0473 | 0.0517 | 0.0433 | -0.0857 | -0.1665 | -0.2117 |
ATTED:At1g02050.html | - | - | - | - | TAIR9 | -0.4228 | -0.5754 | -0.3727 | -0.2457 | -0.3412 | -0.4571 | -0.7016 | -0.736 | -0.7046 |
ATTED:At1g02060.html | HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT | AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT | 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 | 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 | PPDB | -0.0318 | -0.3155 | -0.1936 | 0.2774 | -0.0313 | -0.1817 | -0.0677 | -0.1746 | -0.0994 |
ATTED:At1g02070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 | 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | TAIR9 | -0.6177 | -0.3713 | -0.4803 | 3.2842 | 3.7902 | 3.8026 | 3.37 | 2.8738 | 3.4371 |
ATTED:At1g02080.html | HeptamerElement:AACCCTA | AACCCTA | 436 | 0.10 | PPDB | -0.1475 | -0.4892 | -0.4826 | 0.2695 | 0.3778 | 0.1621 | 0.0178 | 0.0653 | -0.0084 |
ATTED:At1g02090.html | HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA | ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA | 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 | 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.7396 | -0.55 | -0.4032 | -0.6592 | -0.5764 | -0.7451 | -0.4788 | -0.4225 | -0.4328 |
ATTED:At1g02100.html | HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG | 138 | 139 | 158 | 159 | 160 | 0.07 | 0.08 | 0.10 | 0.10 | 0.08 | PPDB | -0.1288 | 0.0198 | 0.1747 | 0.5745 | 0.6597 | 0.554 | 0.1564 | 0.3348 | 0.1523 |
ATTED:At1g02120.html | HeptamerElement:GGCCCAA | GGCCCAA | 176 | 0.07 | TAIR9 | 0.0926 | 0.1717 | 0.0447 | 0.9126 | 0.7862 | 0.9799 | 0.65 | 0.6477 | 0.6735 |
ATTED:At1g02130.html | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC | 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 | PPDB | -0.5058 | -0.3975 | -0.3033 | 0.0886 | 0.0267 | 0.0444 | 0.0194 | -0.0116 | 0.0185 |
ATTED:At1g02140.html | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA | CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA | 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 | 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 | PPDB | -0.3481 | -0.2125 | -0.1176 | -0.0513 | -0.1076 | -0.1512 | 0.0419 | 0.0953 | 0.0825 |
ATTED:At1g02160.html | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA | GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA | 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 | 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 | PPDB | -0.2516 | -0.0483 | -0.1264 | 0.3528 | 0.2552 | 0.3364 | 0.276 | 0.2737 | 0.3204 |
ATTED:At1g02180.html | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA | 69 | 70 | 71 | 72 | 88 | 0.07 | 0.07 | 0.09 | 0.06 | 0.07 | PPDB | -0.2205 | -0.1704 | 0.0307 | -0.8095 | -0.5841 | -0.8972 | -0.2247 | -0.1291 | -0.1753 |
ATTED:At1g02190.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA | TATATAA | CTATATA | TCTATAT | CTCTATA | 28 | 29 | 30 | 31 | 0.11 | 0.13 | 0.10 | 0.10 | PPDB | -1.6856 | -1.8578 | -2.0107 | -1.6992 | -1.6957 | -1.6169 | -1.8326 | -1.9238 | -1.9364 |
ATTED:At1g02205.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA | TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA | 34 | 35 | 46 | 47 | 70 | 0.11 | 0.13 | 0.07 | 0.08 | 0.06 | PPDB | -3.1958 | -3.5781 | -3.4623 | 2.1099 | 2.2301 | 2.3606 | 1.8285 | 1.6937 | 1.7616 |
ATTED:At1g02260.html | HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC | CGTGGCA | ACGTGGC | 46 | 47 | 0.08 | 0.09 | PPDB | -0.2026 | -0.188 | -0.2266 | -0.037 | -0.0519 | -0.0076 | -0.3862 | -0.4101 | -0.4448 |
ATTED:At1g02270.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 126 | 127 | 0.09 | 0.09 | PPDB | 0.5684 | 0.5936 | 0.4456 | -0.1447 | -0.1601 | -0.1176 | -0.0012 | -0.046 | -0.0311 |
ATTED:At1g02280.html | HeptamerElement:GATAAGG | GATAAGG | 15 | 0.07 | PPDB | 0.5717 | 0.6626 | 0.6285 | -0.649 | -0.9414 | -0.7213 | -0.8893 | -0.8838 | -0.8563 |
ATTED:At1g02310.html | HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA | CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA | 25 | 34 | 35 | 36 | 131 | 541 | 542 | 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 | PPDB | -0.6579 | -0.6234 | -0.6041 | -0.1783 | -0.1786 | -0.3557 | 0.3368 | -0.0533 | -0.0019 |
ATTED:At1g02330.html | HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT | GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT | 90 | 105 | 106 | 107 | 179 | 180 | 199 | 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.2478 | 0.0115 | -0.1454 | 0.0557 | -0.2035 | -0.1436 | 0.1865 | -0.0336 | 0.1185 |
ATTED:At1g02340.html | HeptamerElement:CCACACA | CCACACA | 114 | 0.06 | PPDB | -0.9085 | -1.6511 | -1.5366 | -1.3058 | -1.4729 | -1.2861 | -1.4117 | -1.4327 | -1.84 |
ATTED:At1g02360.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT | TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT | 30 | 31 | 32 | 52 | 53 | 416 | 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 | PPDB | -0.2492 | 0.1221 | -0.3036 | -0.9454 | -0.9484 | -0.8696 | -1.0482 | -0.9688 | -0.8885 |
ATTED:At1g02370.html | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | AACCCTA | AAACCCT | TAAACCC | TTAAACC | 31 | 32 | 33 | 34 | 0.11 | 0.12 | 0.08 | 0.06 | PPDB | -0.7673 | -0.409 | -0.6688 | -1.024 | -0.9515 | -1.1261 | -0.9098 | -1.0169 | -0.9592 |
ATTED:At1g02390.html | HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC | TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC | 28 | 71 | 122 | 172 | 173 | 180 | 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 | PPDB | -0.8135 | -1.1366 | -1.0314 | -1.031 | -0.8899 | -0.8801 | -0.9905 | -0.9332 | -0.7827 |
ATTED:At1g02400.html | HeptamerElement:AATAATT | HeptamerElement:AATAATT | AATAATT | AATAATT | 236 | 332 | 0.06 | 0.06 | PPDB | 1.4722 | 1.3983 | 1.4459 | -0.4909 | -0.131 | -0.4023 | -0.7356 | -0.7273 | -0.8326 |
ATTED:At1g02410.html | HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT | 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 | 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | PPDB | -0.191 | -0.1851 | -0.2376 | -0.1862 | -0.2652 | -0.1673 | -0.0511 | -0.0393 | -0.0378 |
ATTED:At1g02450.html | HeptamerElement:AAATATC | HeptamerElement:AAATATC | AAATATC | AAATATC | 165 | 187 | 0.07 | 0.07 | PPDB | -0.1527 | 0.0121 | -0.2206 | -0.2002 | -0.318 | -0.2384 | 0.6722 | 0.635 | 0.6661 |
ATTED:At1g02460.html | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT | ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT | 47 | 48 | 49 | 50 | 68 | 126 | 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 | TAIR9 | -0.1305 | -0.414 | -0.112 | -0.1216 | -0.0038 | -0.0606 | -0.3016 | 0.0219 | -0.1484 |
ATTED:At1g02470.html | HeptamerElement:AAAGTCA | AAAGTCA | 164 | 0.07 | TAIR9 | -0.7569 | -1.2795 | -1.1332 | -0.7351 | -0.6653 | -0.8332 | -1.0045 | -0.9409 | -0.9784 |
ATTED:At1g02475.html | - | - | - | - | PPDB | 0.3671 | 0.6385 | 0.7874 | 0.8293 | 0.7926 | 1.0918 | 0.4838 | 0.478 | 0.4289 |