AtGenExpress_ATTED_Flowering |
This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_ATTED_Fruit_Seeds |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_ATTED_Leaf |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_ATTED_Root |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_ATTED_Seedling |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_ATTED_Stem |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_ATTED_Whole_Plant |
This collection of Gene Expression Properties are associated with whole plant body parts. |
value
#LINK | ||||||||
#lang | en | |||||||
#attribution_name | GenoCon | |||||||
#attribution_url | http://promotercad.org | |||||||
#license | http://creativecommons.org/licenses/by/3.0/deed.en | |||||||
#file_name | AtGenExpress_ATTED_Whole_Plant | |||||||
#download_from | http://linkdata.org/work/rdf1s781i | |||||||
#namespace | ATTED | http://atted.jp/data/locus/ | ||||||
#namespace | HeptamerElement | http://linkdata.org/work/rdf1s328i/Heptamer_elements.html# | ||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | ||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | ||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | ||||||
#property | motif | motif sequence | motif position | CEG | Origin of baseline sequence | label:Col-0_whole21d | label:Col-0_whole22d | label:Col-0_whole23d |
#object_type_xsd | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
ATTED:At1g01030.html | - | - | - | - | TAIR9 | -0.4239 | -0.5089 | -0.3898 | -0.4611 | -0.623 | -0.1295 | -0.4795 | -0.3702 | -0.1957 |
ATTED:At1g01050.html | HeptamerElement:ATATAAA | ATATAAA | 65 | 0.08 | PPDB | 0.1759 | 0.1831 | 0.1243 | 0.1437 | 0.1642 | 0.2404 | -0.0336 | 0.0367 | 0.0888 |
ATTED:At1g01060.html | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | ACGTGTC | CACGTGT | CCACGTG | 168 | 169 | 170 | 0.09 | 0.10 | 0.07 | PPDB | -0.0444 | -0.5047 | 0.1005 | 0.5907 | 0.6436 | 0.6474 | 1.0496 | 0.1637 | 0.5117 |
ATTED:At1g01070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT | ATAAATA | TATAAAT | AAAATAT | AAAATAT | 113 | 114 | 183 | 524 | 0.08 | 0.10 | 0.07 | 0.07 | PPDB | 0.0824 | 0.1357 | 0.5446 | 0.6418 | 0.3656 | 0.2567 | 0.0136 | 0.2268 | 0.1954 |
ATTED:At1g01080.html | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | ATGGGCC | AATGGGC | 287 | 288 | 0.08 | 0.09 | PPDB | 1.0802 | 1.2234 | 1.093 | 1.2172 | 1.1779 | 1.336 | 0.9599 | 1.0305 | 1.0006 |
ATTED:At1g01090.html | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAA | ATATATA | TATATAT | ATATATA | 43 | 44 | 45 | 46 | 0.11 | 0.10 | 0.10 | 0.10 | PPDB | -0.2524 | -0.1984 | -0.0639 | -0.0839 | -0.1079 | -0.2009 | -0.2515 | -0.0086 | -0.2178 |
ATTED:At1g01100.html | HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA | TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA | 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 | PPDB | -0.0825 | -0.0115 | -0.0415 | -0.0871 | -0.0329 | -0.2592 | -0.1877 | -0.0046 | -0.0925 |
ATTED:At1g01110.html | - | - | - | - | PPDB | -0.963 | -0.5444 | -0.3769 | -0.1248 | -0.2857 | -0.5641 | -0.2855 | -0.1287 | -0.1792 |
ATTED:At1g01130.html | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT | AAGCCCA | AAAGCCC | GCCCAAT | 36 | 37 | 86 | 0.07 | 0.06 | 0.07 | PPDB | -0.3752 | -0.6164 | -0.1946 | -0.5281 | -0.6571 | -0.776 | -0.3742 | -0.3026 | -0.6765 |
ATTED:At1g01140.html | HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA | ACGTGGC | ACGCGGA | 78 | 113 | 0.07 | 0.07 | PPDB | 1.1696 | 1.347 | 0.5359 | 0.4398 | 0.4886 | 0.4338 | 0.8716 | 0.5324 | 0.7527 |
ATTED:At1g01150.html | HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | AAACCCT | AAACCCT | TAAACCC | 382 | 407 | 408 | 0.14 | 0.14 | 0.10 | TAIR9 | -0.0333 | 0.0664 | -0.0539 | -0.008 | -0.1478 | 0.1725 | 0.1031 | -0.1013 | -0.0224 |
ATTED:At1g01160.html | HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT | GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT | 166 | 193 | 194 | 212 | 0.07 | 0.07 | 0.07 | 0.06 | PPDB | -0.3891 | -0.8125 | -0.6071 | -0.6309 | -0.7525 | -0.4467 | -0.5749 | -0.4163 | -0.4825 |
ATTED:At1g01170.html | HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT | GATAAGA | AGATAAG | TTATCCA | GCCCATT | 18 | 19 | 38 | 64 | 0.06 | 0.06 | 0.09 | 0.10 | PPDB | 0.4365 | 0.578 | 0.5245 | 0.4114 | 0.4944 | 0.4041 | 0.489 | 0.4792 | 0.53 |
ATTED:At1g01200.html | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | ATATAAA | ATATAAA | ATATAAA | 38 | 298 | 322 | 0.08 | 0.08 | 0.08 | TAIR9 | 0.044 | 0.0478 | -0.0037 | 0.3262 | 0.103 | 0.0547 | 0.3442 | -0.0686 | 0.0673 |
ATTED:At1g01220.html | HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | CTCCAGA | TGACTTT | TTGACTT | TTTGACT | 43 | 108 | 109 | 110 | 0.06 | 0.06 | 0.07 | 0.07 | TAIR9 | 0.3712 | 0.4466 | 0.505 | 0.4402 | 0.6362 | 0.5073 | 0.6804 | 0.5846 | 0.577 |
ATTED:At1g01225.html | HeptamerElement:TCTCTAG | TCTCTAG | 95 | 0.06 | TAIR9 | -0.6575 | -0.3298 | -0.2477 | -0.1618 | -0.5223 | -0.2705 | -0.506 | -0.2063 | -0.3237 |
ATTED:At1g01230.html | HeptamerElement:AAATATC | AAATATC | 43 | 0.13 | PPDB | 0.0047 | 0.1978 | 0.0541 | 0.1888 | 0.1692 | 0.1629 | 0.1016 | 0.1975 | 0.3053 |
ATTED:At1g01240.html | HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG | CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG | 117 | 132 | 133 | 477 | 478 | 518 | 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 | PPDB | 0.0614 | 0.0378 | 0.4793 | 0.6633 | 0.5488 | 0.1986 | 0.8138 | 0.4518 | 0.4121 |
ATTED:At1g01280.html | HeptamerElement:TATATAT | TATATAT | 39 | 0.10 | TAIR9 | -0.3762 | -0.5201 | -0.1354 | -0.4028 | -0.3637 | -0.1864 | -0.2333 | 0.2086 | -0.2337 |
ATTED:At1g01290.html | HeptamerElement:AACCCTA | AACCCTA | 32 | 0.13 | TAIR9 | -0.3953 | -0.0771 | -0.369 | 0.1393 | 0.0754 | 0.136 | 0.2465 | 0.1857 | 0.1358 |
ATTED:At1g01300.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA | GATATTT | AGATATT | TTATCCA | 128 | 129 | 177 | 0.10 | 0.10 | 0.06 | PPDB | -0.3668 | -0.1629 | -0.254 | -0.2074 | -0.2173 | -0.333 | -0.6437 | 0.115 | 0.0082 |
ATTED:At1g01310.html | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA | TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA | 52 | 53 | 54 | 60 | 61 | 0.06 | 0.07 | 0.06 | 0.06 | 0.07 | TAIR9 | -0.5341 | -0.4627 | -0.4244 | -0.644 | -0.5049 | -0.522 | -0.4151 | -0.6507 | -0.4992 |
ATTED:At1g01320.html | - | - | - | - | PPDB | 0.8753 | 0.9369 | 0.8903 | 0.9476 | 0.9491 | 1.2553 | 1.0609 | 1.0602 | 1.0154 |
ATTED:At1g01430.html | HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT | CATGCAA | CCGACAT | AATATCT | 150 | 191 | 223 | 0.08 | 0.06 | 0.07 | PPDB | 0.3403 | 0.0533 | 0.4299 | 0.6657 | 0.6644 | 0.3987 | 0.2844 | 0.5088 | 0.3499 |
ATTED:At1g01440.html | - | - | - | - | PPDB | -0.052 | 0.0995 | 0.1951 | 0.1115 | 0.1592 | 0.0754 | 0.4209 | 0.0215 | 0.2895 |
ATTED:At1g01470.html | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC | AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC | 115 | 116 | 152 | 153 | 233 | 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | PPDB | 2.1001 | 2.0476 | 1.3035 | 1.4194 | 1.4057 | 1.2896 | 0.987 | 1.1955 | 1.4658 |
ATTED:At1g01480.html | HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA | TATATAA | ATATAAA | TATATAA | CTATATA | 27 | 331 | 332 | 333 | 0.10 | 0.08 | 0.10 | 0.13 | PPDB | -0.1635 | -0.0499 | -0.2863 | -0.4049 | -0.479 | -0.51 | -0.6708 | -0.4921 | -0.3771 |
ATTED:At1g01490.html | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.0597 | -0.2369 | 0.131 | 0.3119 | 0.1596 | -0.0822 | 0.561 | 0.1959 | 0.4067 |
ATTED:At1g01500.html | HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG | AAACCCT | AATATCT | AAATATC | ACACGTG | 5 | 13 | 14 | 136 | 0.14 | 0.11 | 0.11 | 0.08 | PPDB | -0.2854 | -0.365 | -0.1439 | -0.1316 | -0.0915 | -0.1018 | -0.1418 | 0.0099 | -0.0979 |
ATTED:At1g01510.html | HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC | TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC | 12 | 44 | 45 | 46 | 111 | 0.07 | 0.08 | 0.10 | 0.13 | 0.09 | PPDB | -0.228 | -0.2201 | -0.1073 | -0.028 | -0.1137 | -0.2187 | -0.2649 | 0.0026 | -0.1518 |
ATTED:At1g01520.html | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | CACGTGT | ACACGTG | 64 | 65 | 0.08 | 0.08 | TAIR9 | -0.1413 | -0.1845 | -0.2408 | 0.0062 | 0.2138 | 0.446 | 0.4448 | 0.0192 | 0.0839 |
ATTED:At1g01540.html | HeptamerElement:CATGCAA | HeptamerElement:CCACACA | CATGCAA | CCACACA | 38 | 43 | 0.08 | 0.07 | PPDB | 0.4877 | 0.4948 | 0.4758 | 0.2077 | 0.315 | 0.3813 | 0.3889 | 0.3186 | 0.1262 |
ATTED:At1g01550.html | HeptamerElement:CGTCACA | CGTCACA | 107 | 0.06 | PPDB | 0.2122 | 0.0835 | -0.0691 | 0.0163 | -0.0698 | 0.0105 | 0.0365 | -0.0322 | 0.0982 |
ATTED:At1g01560.html | - | - | - | - | PPDB | 2.9691 | 3.2905 | 1.5403 | 0.2868 | 0.6114 | 0.3506 | 0.9997 | 0.1536 | 0.8886 |
ATTED:At1g01600.html | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA | 27 | 28 | 29 | 524 | 525 | 526 | 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 | PPDB | -0.3806 | -0.3812 | -0.4873 | -0.1944 | -0.3398 | -0.1287 | -0.5105 | 0.1453 | -0.1755 |
ATTED:At1g01610.html | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC | CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC | 24 | 34 | 52 | 71 | 72 | 0.06 | 0.06 | 0.06 | 0.09 | 0.06 | PPDB | -0.4263 | -0.2923 | -0.2818 | -0.1588 | -0.1848 | -0.151 | -0.3834 | -0.0238 | -0.1719 |
ATTED:At1g01620.html | HeptamerElement:TTATCCA | TTATCCA | 135 | 0.09 | PPDB | -0.1601 | -0.1419 | 0.2145 | 0.2753 | -0.0825 | -0.1582 | -0.4297 | 0.1887 | 0.0066 |
ATTED:At1g01630.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | 83 | 84 | 85 | 86 | 103 | 0.07 | 0.07 | 0.10 | 0.08 | 0.07 | PPDB | 0.0601 | 0.2583 | 0.1029 | 0.2006 | 0.3003 | 0.2503 | 0.2025 | 0.2683 | 0.3538 |
ATTED:At1g01650.html | - | - | - | - | PPDB | 0.0699 | -0.0016 | -0.4516 | -0.1378 | -0.2095 | -0.0972 | -0.2446 | -0.1089 | -0.0495 |
ATTED:At1g01670.html | HeptamerElement:ACGTGTC | ACGTGTC | 64 | 0.10 | PPDB | 0.0843 | -0.1824 | 0.3092 | 0.0067 | 0.0827 | 0.0107 | 0.3282 | 0.2088 | -0.0176 |
ATTED:At1g01710.html | HeptamerElement:ACACGTG | ACACGTG | 93 | 0.09 | PPDB | -0.1842 | -0.0179 | -0.142 | -0.0253 | -0.0752 | -0.0693 | -0.0776 | -0.1965 | -0.0176 |
ATTED:At1g01720.html | HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC | 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 | 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 | PPDB | -1.0059 | -1.1655 | -1.8292 | -1.2453 | -1.4962 | -1.5718 | -0.9439 | -1.0536 | -1.1091 |
ATTED:At1g01730.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC | 96 | 97 | 98 | 99 | 110 | 0.07 | 0.08 | 0.11 | 0.08 | 0.08 | PPDB | -0.4004 | -0.4174 | -0.1143 | -0.0343 | -0.061 | -0.2101 | 0.1193 | -0.0696 | 0.0535 |
ATTED:At1g01740.html | - | - | - | - | TAIR9 | -0.0972 | 0.0308 | 0.2813 | 0.2228 | 0.111 | 0.08 | 0.3549 | 0.0372 | 0.1182 |
ATTED:At1g01770.html | HeptamerElement:ATATATA | HeptamerElement:TATATAT | ATATATA | TATATAT | 57 | 58 | 0.09 | 0.09 | PPDB | -0.1846 | 0.0756 | 0.007 | 0.1319 | -0.0924 | -0.1694 | 0.0227 | 0.0836 | -0.0921 |
ATTED:At1g01790.html | - | - | - | - | PPDB | 0.8145 | 0.8607 | 0.7829 | 0.9763 | 0.8555 | 1.2314 | 1.007 | 0.8906 | 0.8059 |
ATTED:At1g01820.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 33 | 34 | 0.09 | 0.09 | PPDB | -0.0072 | 0.0095 | 0.009 | -0.015 | -0.0817 | -0.0643 | -0.0131 | 0.1138 | 0.0942 |
ATTED:At1g01840.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 | 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.4186 | -0.5672 | -0.0309 | -0.1583 | -0.2239 | -0.002 | -0.1139 | -0.0405 | -0.171 |
ATTED:At1g01860.html | - | - | - | - | PPDB | 0.3515 | 0.1413 | 0.3394 | 0.4576 | 0.2383 | 0.5097 | 0.159 | 0.2183 | 0.3445 |
ATTED:At1g01900.html | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | 46 | 47 | 48 | 49 | 113 | 236 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | PPDB | 0.2122 | 0.0498 | 0.3576 | 0.5965 | 0.1534 | 0.3934 | -0.0321 | 0.5983 | 0.3961 |
ATTED:At1g01920.html | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC | 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 | 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 | PPDB | -0.0393 | -0.2857 | -0.3482 | -0.2824 | -0.2389 | -0.4701 | -0.298 | -0.5051 | -0.3563 |
ATTED:At1g01930.html | HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT | ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT | 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 | 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 | PPDB | -0.2943 | -0.3047 | -0.3125 | -0.2415 | -0.1959 | -0.4939 | -0.2007 | -0.2396 | -0.2757 |
ATTED:At1g01940.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT | 111 | 112 | 113 | 114 | 122 | 123 | 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 | PPDB | -0.3385 | -0.1862 | -0.1065 | -0.0795 | -0.0406 | -0.1217 | -0.4288 | -0.0353 | -0.0843 |
ATTED:At1g01950.html | HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT | AAAATAT | CTCTCTT | 20 | 169 | 0.07 | 0.06 | PPDB | 0.1483 | 0.1672 | 0.038 | -0.2637 | -0.4047 | -0.3224 | -0.3237 | -0.457 | -0.3339 |
ATTED:At1g01970.html | HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC | 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 | 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 | PPDB | 0.3707 | 0.3475 | 0.3668 | 0.4678 | 0.5013 | 0.807 | 0.4546 | 0.6742 | 0.5175 |
ATTED:At1g01990.html | HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT | 37 | 61 | 62 | 63 | 74 | 123 | 124 | 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 | PPDB | -0.0223 | -0.1555 | 0.0175 | -0.2038 | -0.0873 | -0.3245 | -0.2218 | -0.0855 | -0.0568 |
ATTED:At1g02020.html | HeptamerElement:TGCCGAC | TGCCGAC | 118 | 0.08 | PPDB | -0.0601 | 0.0776 | -0.0281 | -0.0354 | 0.043 | 0.0167 | 0.3235 | 0.1912 | 0.1887 |
ATTED:At1g02050.html | - | - | - | - | TAIR9 | -0.413 | -0.6301 | -0.2167 | -0.5777 | -0.6932 | -0.239 | -0.2997 | 0.5217 | -0.7135 |
ATTED:At1g02060.html | HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT | AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT | 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 | 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 | PPDB | -0.1467 | -0.1569 | -0.0296 | 0.0621 | 0.0616 | -0.0767 | -0.2926 | -0.0073 | -0.0626 |
ATTED:At1g02070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 | 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | TAIR9 | -0.4665 | -0.3871 | 0.2038 | 0.2923 | -0.2711 | -0.3835 | -0.193 | 0.0091 | 0.0296 |
ATTED:At1g02080.html | HeptamerElement:AACCCTA | AACCCTA | 436 | 0.10 | PPDB | -0.4966 | -0.3287 | -0.3131 | 0.0253 | -0.2144 | -0.2511 | -0.0078 | -0.0832 | -0.1166 |
ATTED:At1g02090.html | HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA | ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA | 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 | 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.5623 | -0.4471 | -0.4261 | -0.5121 | -0.3738 | -0.1203 | -0.5612 | -0.2141 | -0.298 |
ATTED:At1g02100.html | HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG | 138 | 139 | 158 | 159 | 160 | 0.07 | 0.08 | 0.10 | 0.10 | 0.08 | PPDB | -0.0154 | -0.0132 | -0.0069 | 0.0425 | 0.0454 | 0.0049 | 0.191 | 0.077 | 0.0944 |
ATTED:At1g02120.html | HeptamerElement:GGCCCAA | GGCCCAA | 176 | 0.07 | TAIR9 | 0.2938 | 0.1158 | 0.1056 | 0.442 | 0.5414 | 0.3649 | 0.5908 | 0.1513 | 0.3726 |
ATTED:At1g02130.html | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC | 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 | PPDB | -0.2833 | -0.4048 | -0.348 | -0.0841 | -0.218 | -0.2194 | -0.3946 | -0.2002 | -0.1942 |
ATTED:At1g02140.html | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA | CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA | 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 | 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 | PPDB | -0.3538 | -0.3797 | -0.3061 | -0.154 | -0.1331 | -0.2066 | -0.306 | -0.0782 | -0.1752 |
ATTED:At1g02160.html | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA | GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA | 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 | 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 | PPDB | -0.287 | -0.1452 | -0.0927 | -0.1348 | -0.1716 | -0.4742 | -0.1005 | -0.2403 | -0.1313 |
ATTED:At1g02180.html | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA | 69 | 70 | 71 | 72 | 88 | 0.07 | 0.07 | 0.09 | 0.06 | 0.07 | PPDB | -0.1545 | -0.2769 | -0.0454 | -0.1111 | -0.3039 | -0.0509 | -0.4286 | -0.2958 | -0.2188 |
ATTED:At1g02190.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA | TATATAA | CTATATA | TCTATAT | CTCTATA | 28 | 29 | 30 | 31 | 0.11 | 0.13 | 0.10 | 0.10 | PPDB | -1.5916 | -1.4677 | -1.1792 | -1.3774 | -1.261 | -1.531 | -1.2153 | -0.8322 | -1.1716 |
ATTED:At1g02205.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA | TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA | 34 | 35 | 46 | 47 | 70 | 0.11 | 0.13 | 0.07 | 0.08 | 0.06 | PPDB | -0.2559 | -0.0287 | 0.3675 | 0.6439 | -0.3529 | 0.2257 | 0.1814 | 0.8846 | 0.3306 |
ATTED:At1g02260.html | HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC | CGTGGCA | ACGTGGC | 46 | 47 | 0.08 | 0.09 | PPDB | -0.0481 | -0.0988 | 0.1489 | -0.007 | 0.1134 | 0.0189 | 0.0733 | 5e-04 | 0.0064 |
ATTED:At1g02270.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 126 | 127 | 0.09 | 0.09 | PPDB | 0.9461 | 0.872 | 0.2551 | 0.2892 | 0.348 | 0.0927 | 0.3228 | 0.2791 | 0.3956 |
ATTED:At1g02280.html | HeptamerElement:GATAAGG | GATAAGG | 15 | 0.07 | PPDB | 0.388 | 0.4295 | 0.711 | 0.6252 | 0.5756 | 0.5176 | 0.2576 | 0.545 | 0.3054 |
ATTED:At1g02310.html | HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA | CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA | 25 | 34 | 35 | 36 | 131 | 541 | 542 | 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 | PPDB | -0.664 | -0.5327 | -0.8704 | -0.8264 | -0.8885 | -0.6232 | -0.6645 | -0.5801 | -0.7705 |
ATTED:At1g02330.html | HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT | GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT | 90 | 105 | 106 | 107 | 179 | 180 | 199 | 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.5803 | -0.4327 | -0.459 | -0.3013 | -0.2486 | -0.6389 | -0.3332 | -0.0584 | -0.1202 |
ATTED:At1g02340.html | HeptamerElement:CCACACA | CCACACA | 114 | 0.06 | PPDB | -0.6819 | -0.9572 | -0.6501 | 0.6295 | -0.354 | 0.3744 | 0.358 | -0.0242 | 0.1024 |
ATTED:At1g02360.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT | TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT | 30 | 31 | 32 | 52 | 53 | 416 | 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 | PPDB | -0.0536 | 0.24 | -0.1936 | -0.2718 | -0.129 | -0.2645 | -0.0429 | -0.3627 | 0.1779 |
ATTED:At1g02370.html | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | AACCCTA | AAACCCT | TAAACCC | TTAAACC | 31 | 32 | 33 | 34 | 0.11 | 0.12 | 0.08 | 0.06 | PPDB | -0.4432 | -0.4939 | -0.5479 | -0.2331 | -0.1302 | -0.1502 | -0.2203 | 0.0538 | -0.1777 |
ATTED:At1g02390.html | HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC | TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC | 28 | 71 | 122 | 172 | 173 | 180 | 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 | PPDB | 0.5248 | -0.1079 | -0.1798 | -0.4115 | -0.5907 | -0.6431 | 0.0277 | -0.2278 | -0.377 |
ATTED:At1g02400.html | HeptamerElement:AATAATT | HeptamerElement:AATAATT | AATAATT | AATAATT | 236 | 332 | 0.06 | 0.06 | PPDB | 1.5171 | 1.2934 | -0.5274 | -1.2889 | -1.2479 | -0.5986 | -1.1365 | -1.1052 | -0.8824 |
ATTED:At1g02410.html | HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT | 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 | 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | PPDB | -0.2139 | -0.0621 | -0.0656 | 0.0148 | -0.1729 | 0.0233 | -0.0264 | -0.1342 | -0.0742 |
ATTED:At1g02450.html | HeptamerElement:AAATATC | HeptamerElement:AAATATC | AAATATC | AAATATC | 165 | 187 | 0.07 | 0.07 | PPDB | 0.2621 | 0.8947 | 0.3309 | 0.1887 | 0.7385 | 0.8264 | 1.4551 | 0.3823 | 0.9539 |
ATTED:At1g02460.html | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT | ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT | 47 | 48 | 49 | 50 | 68 | 126 | 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 | TAIR9 | 0.0665 | -0.1553 | 0.0996 | 0.0143 | -0.1364 | -0.0484 | -0.0529 | -0.0945 | -0.2397 |
ATTED:At1g02470.html | HeptamerElement:AAAGTCA | AAAGTCA | 164 | 0.07 | TAIR9 | -0.6876 | -0.5336 | -0.5878 | -0.0522 | -0.2933 | 0.0572 | -0.1661 | -0.2891 | 0.2314 |
ATTED:At1g02475.html | - | - | - | - | PPDB | 0.9995 | 0.9791 | 0.8625 | 1.081 | 1.0206 | 1.1944 | 0.9652 | 1.1862 | 1.2905 |