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Developmental Coexpression (AtGenExpress + ATTED-II promoter motif) Full

Developmental Microarray Expression Data (AtGenExpress) of plant developmental tissues, combined with CEG coexpression analysis regulatory (7mer) motif calculations (ATTED-II). We took the median of triplicate measurements from AtGenExpress, then sorted the developmental series into plant organs (Flower, Leaf, Root, Stem, Fruit & Seeds), with one category for seedlings (8 days old or less) and another for whole plants (older than 8 days). Gene Loci without expression data or motif data were removed from this database.

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101


Descriptions for each data table:
AtGenExpress_ATTED_Flowering
This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_ATTED_Fruit_Seeds
This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_ATTED_Leaf
This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_ATTED_Root
This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_ATTED_Seedling
This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_ATTED_Stem
This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_ATTED_Whole_Plant
This collection of Gene Expression Properties are associated with whole plant body parts.
Heptamer_elements A list of the 7mer sequence motifs from ATTED-II. This table lists each 7mer along with the calculated CEG value and the position from the TSS of the maximum CEG value.
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69

value

useful
3
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
#license http://creativecommons.org/publicdomain/zero/1.0/deed.en
#file_name AtGenExpress_ATTED_Leaf
#download_from http://linkdata.org/work/rdf1s328i
#namespace ATTED http://atted.jp/data/locus/
#namespace Flowering http://linkdata.org/work/rdf1s220i/Flowering.html#
#namespace Fruit_Seeds http://linkdata.org/work/rdf1s220i/Fruit_Seeds.html#
#namespace HeptamerElement http://linkdata.org/work/rdf1s328i/Heptamer_elements.html#
#namespace Leaf http://linkdata.org/work/rdf1s220i/Leaf.html#
#namespace Root http://linkdata.org/work/rdf1s220i/Root.html#
#namespace Seedling http://linkdata.org/work/rdf1s220i/Seedling.html#
#namespace Stem http://linkdata.org/work/rdf1s220i/Stem.html#
#namespace Whole_Plant http://linkdata.org/work/rdf1s220i/Whole_Plant.html#
#property motif position motif motif sequence CEG label:Col-0_roset4_1l label:gl1T_roset4_1l label:Col-0_roset2 label:Col-0_roset4 label:Col-0_roset6 label:Col-0_roset8 label:Col-0_roset10 label:Col-0_roset12 label:gl1T_rosett12 label:Col-0_lf7_prox label:Col-0_lf7_distal label:Col-0_senescent label:Col-0_cauline label:Col-0_roset14 label:Col-0_roset21 label:Col-0_leaf
#object_type_xsd float string string float float float float float float float float float float float float float float float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
ATTED:At1g01030.html 52 | 54 | 56 | 91 HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:ATGGGCC TCTCTCT | TCTCTCT | TCTCTCT | ATGGGCC 0.06 | 0.07 | 0.06 | 0.08 0.0835 -0.0734 -0.2671 -0.4836 -0.3810 -0.5211 -0.3584 -0.1485 -0.2155 -0.1898 -0.2794 -0.6328 -0.3188 0.6017 0.4223 -0.0937
ATTED:At1g01050.html 34 HeptamerElement:ATATAAA ATATAAA 0.08 -0.1668 0.1051 0.1234 0.2288 0.3111 0.3151 0.2903 0.2029 0.1785 0.2185 0.0642 -0.3892 0.2231 -0.4486 -0.4730 -0.3786
ATTED:At1g01060.html 107 | 108 | 109 HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG ACGTGTC | CACGTGT | CCACGTG 0.09 | 0.10 | 0.07 0.3245 -0.5826 0.6259 0.1442 0.1119 -0.8339 -0.8621 -1.1736 0.1970 -0.3824 -0.1527 -0.0257 2.0983 -1.5480 -1.2817 -1.8942
ATTED:At1g01070.html 30 | 31 | 100 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT ATAAATA | TATAAAT | AAAATAT 0.08 | 0.10 | 0.07 -1.5577 -1.2787 1.0836 0.7917 0.3560 -0.4228 -1.0104 -1.4387 -1.2503 0.1955 0.1516 1.7637 1.0359 -1.2491 -1.2251 -0.7125
ATTED:At1g01080.html 98 | 99 HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC ATGGGCC | AATGGGC 0.08 | 0.09 1.8521 1.8228 0.5989 0.9446 1.1096 1.4834 1.5623 1.6899 1.4799 1.4325 1.3080 -0.8575 0.2616 1.4371 1.2162 1.3385
ATTED:At1g01090.html 35 | 36 | 37 | 38 HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAA | ATATATA | TATATAT | ATATATA 0.11 | 0.10 | 0.10 | 0.10 0.2519 0.0230 -0.6169 -0.3751 -0.2721 -0.0563 0.0025 0.0022 -0.0418 -0.1156 -0.2342 -0.7277 -0.3310 0.3579 0.3235 0.1541
ATTED:At1g01100.html 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 0.1448 -0.0651 -0.7035 -0.9056 -0.8984 -0.3999 -0.2041 0.2379 0.1352 -0.6239 -0.8712 -1.3823 -1.6106 0.2793 0.4970 -0.1059
ATTED:At1g01110.html 40 | 41 | 42 | 80 | 81 | 85 | 143 HeptamerElement:CTATAAA | HeptamerElement:TCTATAA | HeptamerElement:GTCTATA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | HeptamerElement:TTGACTT | HeptamerElement:GATATTT CTATAAA | TCTATAA | GTCTATA | TTCTAGA | CTTCTAG | TTGACTT | GATATTT 0.09 | 0.06 | 0.06 | 0.10 | 0.08 | 0.09 | 0.08 -0.7246 -0.9588 -0.9802 -0.5872 -0.5462 -0.6145 -0.5836 -0.6411 -0.7428 -0.7089 -0.8565 -0.9873 -0.8462 -0.5495 -0.3326 -0.6482
ATTED:At1g01130.html 40 | 41 | 90 HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT AAGCCCA | AAAGCCC | GCCCAAT 0.07 | 0.06 | 0.07 -0.2121 -0.3125 0.0543 -0.1153 -0.0719 0.0655 -0.1037 -0.1422 -0.6767 0.1189 0.0331 -0.8714 -0.7811 -0.5359 -0.3834 -0.3306
ATTED:At1g01140.html 78 | 113 HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA ACGTGGC | ACGCGGA 0.07 | 0.07 -0.2318 0.2412 1.5784 1.4752 0.9270 0.7447 0.4351 0.0028 -0.0496 0.9477 1.4452 1.8059 1.8605 -0.4837 -0.9105 0.1247
ATTED:At1g01150.html 42 | 43 HeptamerElement:AAACCCT | HeptamerElement:TAAACCC AAACCCT | TAAACCC 0.14 | 0.10 -0.0363 -0.0404 -0.0841 -0.1080 -0.0106 0.0280 -0.0252 -0.0570 0.0004 0.0442 0.0182 -0.1173 -0.0457 0.0264 -0.0143 -0.0379
ATTED:At1g01160.html 105 | 133 | 151 HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT GGCCCAA | AGGCCCA | GGGCCTT 0.07 | 0.07 | 0.06 -0.3711 -0.6272 -0.4109 -0.7098 -0.8287 -0.8862 -0.8578 -0.3826 -0.3891 -1.2162 -1.1274 0.3277 -0.1642 -0.2599 -0.0213 -0.3425
ATTED:At1g01170.html 29 | 30 | 49 | 75 HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT GATAAGA | AGATAAG | TTATCCA | GCCCATT 0.06 | 0.06 | 0.09 | 0.10 0.4152 0.6074 0.8410 0.7503 0.5178 0.5053 0.5160 0.6382 0.7609 0.6764 0.6238 -0.6635 0.2699 0.3439 0.3566 0.7037
ATTED:At1g01200.html 38 HeptamerElement:ATATAAA ATATAAA 0.08 0.0865 0.1010 -0.2168 -0.0519 0.1508 0.2174 0.2775 0.1472 0.0534 0.2601 -0.0035 -0.5156 -0.3345 -0.0727 0.0143 -0.0769
ATTED:At1g01220.html 43 | 108 | 109 | 110 HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT CTCCAGA | TGACTTT | TTGACTT | TTTGACT 0.06 | 0.06 | 0.07 | 0.07 0.6654 0.5734 -0.1505 0.0001 0.0624 0.2985 0.3972 0.4481 0.6696 0.4162 0.1764 -0.0684 0.3773 0.7441 0.6478 0.2022
ATTED:At1g01225.html 95 HeptamerElement:TCTCTAG TCTCTAG 0.06 -0.0272 -0.3041 -1.3122 -1.0159 -0.6635 -0.4485 -0.4202 -0.1770 -0.2305 -0.5666 -0.9950 -1.0572 -0.9060 0.1086 -0.0972 -0.4130
ATTED:At1g01230.html 67 HeptamerElement:AAATATC AAATATC 0.13 -0.3603 -0.0159 0.1304 0.2502 0.1135 0.1823 -0.0970 -0.1481 -0.1477 0.2990 0.3407 0.3581 0.1649 -0.4442 -0.3243 0.2584
ATTED:At1g01240.html 89 | 104 | 105 HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CAGCTGT | CACGTGT | ACACGTG 0.07 | 0.11 | 0.10 -0.1353 -0.0508 0.6631 0.3386 -0.1276 -0.3638 -0.4793 -0.5953 -0.2509 -0.1463 0.2362 2.1666 1.2860 0.2378 0.1473 0.8054
ATTED:At1g01280.html 39 HeptamerElement:TATATAT TATATAT 0.10 -0.3146 -0.3223 -0.3351 -0.4526 -0.2754 -0.3692 -0.2584 -0.2743 -0.3498 -0.2138 -0.3127 -0.4562 -0.3416 -0.2119 -0.3600 -0.2722
ATTED:At1g01290.html 32 HeptamerElement:AACCCTA AACCCTA 0.13 -0.0373 -0.2410 0.2257 -0.0694 -0.4267 -0.1538 -0.4205 -0.5157 0.0238 -0.4364 -0.1959 0.8406 0.3722 -0.1307 -0.0042 -0.0300
ATTED:At1g01300.html 41 | 42 | 90 HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA GATATTT | AGATATT | TTATCCA 0.10 | 0.10 | 0.06 -0.5540 -0.6405 -0.9912 -1.0009 -0.8447 -0.3392 -0.3640 -0.0333 -0.1768 -0.4315 -0.6680 -3.1096 -1.5124 -0.0828 0.0678 -0.8435
ATTED:At1g01310.html 52 | 53 | 54 | 60 | 61 HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA 0.06 | 0.07 | 0.06 | 0.06 | 0.07 -0.4875 -0.4746 -0.6665 -0.4952 -0.4204 -0.4111 -0.5128 -0.4791 -0.4535 -0.3049 -0.4582 -0.4702 -0.4543 -0.6149 -0.5480 -0.4541
ATTED:At1g01320.html 49 HeptamerElement:AGATATT AGATATT 0.10 1.5397 1.3127 0.7394 0.7263 0.7156 0.8492 1.0300 1.1165 1.6449 0.8276 0.6663 1.5391 1.2942 1.2640 1.1822 0.8751
ATTED:At1g01430.html 76 | 117 | 149 HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT CATGCAA | CCGACAT | AATATCT 0.08 | 0.06 | 0.07 0.5990 0.6785 0.7041 0.3696 0.3004 0.1849 0.0374 -0.0067 0.1433 0.1828 0.0902 -0.9438 0.1361 0.4363 0.1865 1.1201
ATTED:At1g01440.html 44 | 45 | 46 | 47 HeptamerElement:ACCCTAG | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC ACCCTAG | AACCCTA | AAACCCT | AAAACCC 0.08 | 0.13 | 0.13 | 0.08 0.1567 0.1060 0.6318 0.5020 0.2898 0.4189 0.1889 -0.0363 0.1865 0.3789 0.5529 1.2049 0.7968 0.1855 0.0955 0.0199
ATTED:At1g01470.html 76 | 77 | 113 | 114 | 194 HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC 0.08 | 0.07 | 0.08 | 0.07 | 0.07 -0.1641 0.6693 2.4244 2.2896 2.0193 1.7635 1.1204 0.6205 0.3004 1.9510 2.2561 1.8366 1.7290 -0.4168 -0.2486 0.9408
ATTED:At1g01480.html 40 | 41 | 42 HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA ATATAAA | TATATAA | CTATATA 0.08 | 0.10 | 0.13 -0.3017 -0.3491 -0.4549 -0.2307 -0.2313 -0.4362 -0.2388 -0.3660 -0.5477 -0.4021 -0.4267 1.0912 -0.2062 -0.6504 -0.3485 -0.3660
ATTED:At1g01490.html 46 | 47 | 49 | 51 | 53 | 55 HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT 0.07 | 0.07 | 0.07 | 0.06 | 0.06 | 0.07 -0.5801 -0.2624 0.8926 0.3795 0.0546 -0.1717 -0.2007 -0.4756 -0.4914 -0.0487 0.2264 1.3777 1.3067 -0.4870 -0.5964 0.2072
ATTED:At1g01500.html 30 | 38 | 39 | 161 HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG AAACCCT | AATATCT | AAATATC | ACACGTG 0.14 | 0.11 | 0.11 | 0.08 0.1298 0.1601 0.0316 -0.2349 -0.2563 -0.2373 -0.1540 -0.0822 -0.1213 -0.1879 -0.2288 0.8361 -0.1076 0.4042 0.2743 0.3420
ATTED:At1g01510.html 6 | 38 | 39 | 40 | 105 HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC 0.07 | 0.08 | 0.10 | 0.13 | 0.09 -0.1727 -0.4273 -0.7188 -0.5089 -0.5227 -0.3795 -0.2818 -0.1630 -0.0479 -0.4882 -0.5305 -0.5198 -0.7559 0.1817 0.2967 -0.2123
ATTED:At1g01520.html 151 | 152 HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CACGTGT | ACACGTG 0.08 | 0.08 0.2995 -0.0504 0.0599 -0.0707 -0.1192 -0.3577 -0.2591 -0.1592 0.2167 -0.2106 -0.0393 2.3275 0.8596 0.0478 -0.1741 0.2015
ATTED:At1g01540.html 5 | 66 | 71 HeptamerElement:TCACTCC | HeptamerElement:CATGCAA | HeptamerElement:CCACACA TCACTCC | CATGCAA | CCACACA 0.07 | 0.08 | 0.07 0.4289 0.3532 0.9262 0.9582 0.9683 0.9172 0.8111 0.5983 0.5967 0.9430 1.1516 -0.7614 0.3178 -0.0173 -0.0747 0.3265
ATTED:At1g01550.html 115 HeptamerElement:CGTCACA CGTCACA 0.06 -0.5094 -0.0782 0.5931 0.2649 0.2689 0.0697 -0.0724 -0.3261 -0.3926 -0.0348 0.1069 1.3919 0.8566 -0.5229 -0.5494 0.0407
ATTED:At1g01560.html 36 | 38 HeptamerElement:TAAACCC | HeptamerElement:TATAAAC TAAACCC | TATAAAC 0.10 | 0.07 -0.7177 1.7949 0.7565 2.3411 2.7551 2.8075 2.5877 1.4145 0.7313 2.4105 2.7800 1.9784 1.2718 -1.4698 -0.9341 -1.1202
ATTED:At1g01600.html 27 | 28 | 29 HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA TATAAAT | CTATAAA | CCTATAA 0.10 | 0.09 | 0.07 -1.2821 -1.9773 -1.9711 -1.8803 -1.8669 -1.8839 -1.3413 0.2971 -1.5173 -1.5639 -1.9170 -2.6014 -2.1017 1.0334 1.3282 0.0350
ATTED:At1g01610.html 11 | 30 | 31 HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC CTCTCTT | AAAACCC | TAAAACC 0.06 | 0.09 | 0.06 0.1615 0.1049 -0.6325 -0.4518 -0.4988 -0.2365 -0.2343 -0.2785 -0.2132 -0.4024 -0.3046 -2.2720 -0.6000 0.3266 0.2785 0.4058
ATTED:At1g01620.html 67 HeptamerElement:TTATCCA TTATCCA 0.09 -0.2249 -0.2433 0.0500 0.1319 -0.0116 -0.0998 -0.1963 -0.2015 -0.4102 -0.1593 -0.0759 -3.8227 -0.3355 0.0049 -0.0217 0.4163
ATTED:At1g01630.html 97 | 98 | 99 | 100 HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC 0.07 | 0.07 | 0.10 | 0.08 0.2452 0.3744 0.2126 0.2339 -0.0197 0.2360 0.2221 0.1414 0.1847 0.2880 0.2936 -0.1170 -0.1342 0.2988 0.3978 0.5620
ATTED:At1g01650.html 95 | 96 | 118 HeptamerElement:GCCCAAA | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA GCCCAAA | AGCCCAA | AAGCCCA 0.06 | 0.07 | 0.07 -0.5183 -0.5451 -0.1640 -0.1280 -0.1750 -0.3206 -0.3479 -0.3582 -0.1057 -0.3561 -0.2053 0.8255 0.4414 -0.4180 -0.2658 -0.4252
ATTED:At1g01670.html 64 HeptamerElement:ACGTGTC ACGTGTC 0.10 0.0911 -0.0066 -0.0371 0.1468 0.2435 0.1419 0.0663 0.2477 0.2613 0.1233 0.1196 0.6276 0.4315 -0.0307 0.0576 -0.2555
ATTED:At1g01710.html 41 HeptamerElement:ACACGTG ACACGTG 0.09 -0.1681 -0.0878 0.2124 0.1487 0.0155 -0.0171 -0.1078 -0.1421 -0.0754 -0.0055 -0.0438 0.7564 0.3523 0.1590 0.0568 -0.2586
ATTED:At1g01720.html 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 114 HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:ACGTGTC TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | ACGTGTC 0.11 | 0.06 | 0.09 | 0.09 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.09 -1.9639 -0.7747 -0.8884 -1.1237 -1.3491 -1.4009 -1.6935 -1.7248 -1.0766 -1.3160 -0.8385 1.0407 0.7749 -1.1794 -1.4734 -0.3077
ATTED:At1g01730.html 65 | 66 | 67 | 68 | 79 HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC 0.07 | 0.08 | 0.11 | 0.08 | 0.08 -1.0791 -0.9710 0.1967 -0.0552 -0.4131 -0.5994 -0.8170 -0.8825 -0.7964 -0.6408 -0.4544 0.9893 0.8231 -0.4555 -0.1942 -0.6744
ATTED:At1g01740.html 30 HeptamerElement:ACCTTAT ACCTTAT 0.06 0.2322 -0.0259 0.2177 0.0350 -0.1441 -0.2441 -0.2154 0.0089 0.0840 -0.2070 -0.0361 0.8028 0.6438 0.1841 0.1224 0.2270
ATTED:At1g01770.html 57 | 58 HeptamerElement:ATATATA | HeptamerElement:TATATAT ATATATA | TATATAT 0.09 | 0.09 0.1250 -0.0213 0.0536 -0.3094 -0.4364 -0.4271 -0.2534 -0.3512 0.1642 -0.2003 -0.3025 0.8338 0.7497 0.3971 0.1860 0.0775
ATTED:At1g01790.html 11 HeptamerElement:CTCTCTT CTCTCTT 0.06 1.0078 0.6730 0.5200 0.9727 1.1756 1.0777 1.1016 0.9840 0.9794 1.1112 1.0674 0.2443 1.2797 0.8315 0.5050 0.8751
ATTED:At1g01820.html 46 | 105 | 106 HeptamerElement:GCGTTCG | HeptamerElement:GATATTT | HeptamerElement:AGATATT GCGTTCG | GATATTT | AGATATT 0.07 | 0.09 | 0.09 -0.2029 -0.0439 0.4141 0.2094 -0.0615 -0.0243 -0.1605 -0.0995 -0.1411 -0.1342 -0.0962 1.2342 0.7744 -0.0827 -0.1520 0.3283
ATTED:At1g01840.html 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 0.2770 0.0444 -0.3370 -0.4077 -0.1072 -0.2192 -0.0291 0.1603 0.1215 -0.4413 -0.3294 -0.6753 -0.5082 0.5098 0.5133 0.0333
ATTED:At1g01860.html 8 HeptamerElement:TCTTATC TCTTATC 0.08 0.8897 0.7698 0.3736 0.1728 0.0951 0.3663 0.4916 0.5599 0.6089 0.3853 0.3214 -0.0649 0.3303 0.8599 0.6314 0.6528
ATTED:At1g01900.html 40 | 41 | 42 | 43 HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAT | ATATATA | TATATAT | ATATATA 0.10 | 0.10 | 0.10 | 0.10 0.6887 0.3739 -1.8052 -1.4538 -0.6720 0.1084 0.4491 0.8024 0.6175 0.0842 -0.8363 -2.2074 -0.9463 0.4901 0.3522 -0.1830
ATTED:At1g01920.html 18 | 19 | 38 | 88 | 89 | 98 | 99 | 100 HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA TAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA 0.09 | 0.07 | 0.09 | 0.10 | 0.06 | 0.07 | 0.08 | 0.09 0.0127 -0.2442 -0.6983 -0.6152 -0.4518 -0.4784 -0.3276 -0.0828 -0.2614 -0.8093 -0.5366 -0.4521 -0.7440 0.1787 0.2269 -0.2367
ATTED:At1g01930.html 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 0.0180 -0.0694 -0.1256 -0.2886 -0.3010 -0.2017 -0.3349 -0.0741 -0.1098 -0.2576 -0.2306 0.2559 -0.1350 0.2015 0.1651 0.0687
ATTED:At1g01940.html 71 | 72 | 73 | 74 | 82 | 83 HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 -0.3014 -0.4948 -0.3576 -0.3845 -0.4202 -0.3570 -0.2028 -0.1291 -0.4191 -0.3540 -0.5641 -0.2439 -0.5835 0.1351 0.3714 -0.3911
ATTED:At1g01950.html 62 | 114 HeptamerElement:CTCTCTT | HeptamerElement:AAAATAT CTCTCTT | AAAATAT 0.06 | 0.07 -0.4133 -0.5215 0.1237 0.4033 0.4383 0.3404 0.1122 -0.0541 -0.3156 0.2280 0.4792 -0.3771 -0.1513 -0.3152 -0.2487 -0.5315
ATTED:At1g01970.html 65 | 81 | 82 | 83 | 84 | 99 | 100 | 101 | 121 | 122 HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC 0.06 | 0.07 | 0.10 | 0.11 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 1.1753 0.9321 -0.1811 -0.0475 0.1218 0.3524 0.5274 0.8254 1.2035 0.3106 0.2489 -0.7259 0.4095 1.2723 1.1301 0.6687
ATTED:At1g01990.html 61 | 85 | 86 | 87 | 98 | 147 | 148 HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT 0.06 | 0.07 | 0.10 | 0.09 | 0.09 | 0.06 | 0.06 -0.0522 -0.3369 0.2718 0.0183 -0.0825 -0.1570 -0.2611 -0.1540 -0.0320 -0.2206 -0.0484 0.0516 0.2355 0.1629 0.0263 -0.1446
ATTED:At1g02020.html 118 HeptamerElement:TGCCGAC TGCCGAC 0.08 0.1675 0.0884 0.1812 0.0674 0.0413 -0.0241 -0.0776 -0.1685 0.0727 0.0832 0.1130 0.9164 0.6759 -0.0725 -0.0798 -0.0444
ATTED:At1g02050.html 37 HeptamerElement:AATATCT AATATCT 0.11 -0.2082 -0.6945 -0.3229 -0.5466 -0.5425 -0.7553 -0.4879 -0.3783 -0.4203 -0.4897 -0.4404 -0.2351 -0.4705 -0.2896 -0.2546 -0.4344
ATTED:At1g02060.html 36 | 68 | 69 | 70 | 80 | 81 | 96 | 114 | 115 | 116 | 117 HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 -0.0705 -0.3653 -0.1673 -0.2356 -0.2426 -0.3209 -0.3012 -0.1426 -0.0577 -0.1490 -0.2085 0.2366 -0.0159 0.0905 0.0345 -0.1844
ATTED:At1g02070.html 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 -0.5052 -0.5481 -0.8058 -0.5992 -0.5228 -0.6687 -0.5626 -0.6599 -0.6901 -0.5796 -0.8213 -0.8164 -0.4424 -0.5356 -0.5162 -0.4180
ATTED:At1g02080.html 62 | 63 | 64 | 65 HeptamerElement:ACCCTAG | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC ACCCTAG | AACCCTA | AAACCCT | AAAACCC 0.06 | 0.10 | 0.11 | 0.08 -0.4169 -0.3870 -0.1665 -0.3827 -0.5807 -0.6029 -0.3992 -0.3784 -0.1910 -0.4048 -0.3512 0.8010 0.2750 -0.0729 -0.1537 -0.7304
ATTED:At1g02090.html 30 | 54 | 68 | 69 | 88 | 89 | 143 | 144 HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 -0.1499 -0.2718 -0.6615 -0.4025 -0.3968 -0.3909 -0.5132 -0.4111 -0.2726 -0.4587 -0.5130 -0.5826 -0.6137 -0.1036 0.0567 -0.4207
ATTED:At1g02100.html 86 | 87 | 106 | 107 | 108 HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG 0.07 | 0.08 | 0.10 | 0.10 | 0.08 -0.3333 -0.3732 0.3961 0.3195 0.0936 0.0048 -0.1462 -0.2274 0.0148 -0.0642 -0.0067 1.0462 0.5830 -0.1638 -0.2128 -0.1493
ATTED:At1g02120.html 38 HeptamerElement:GGCCCAA GGCCCAA 0.07 -0.1328 0.0459 0.4044 0.3604 0.3604 0.1651 0.0454 -0.2450 0.0979 0.1185 0.1453 1.3425 0.8443 -0.1189 -0.1600 0.1080
ATTED:At1g02130.html 45 | 46 | 47 | 72 | 73 | 74 HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 0.0034 0.0377 -0.0876 -0.2717 -0.3595 -0.2423 -0.1619 -0.1734 -0.0712 -0.3115 -0.3800 0.4839 0.1198 -0.0334 -0.0789 0.1254
ATTED:At1g02140.html 58 | 59 | 60 | 61 | 72 | 73 | 106 | 107 | 192 HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 0.0009 -0.1889 -0.2315 -0.2269 -0.3090 -0.2071 -0.2182 -0.1548 -0.2863 -0.4452 -0.4922 -0.0130 -0.3391 0.0460 0.1333 -0.0625
ATTED:At1g02160.html 43 | 44 | 45 | 66 | 67 | 82 | 99 HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC 0.09 | 0.10 | 0.07 | 0.10 | 0.08 | 0.08 | 0.09 -0.3079 -0.1479 -0.0122 -0.0482 -0.3250 -0.3541 -0.3170 -0.1451 -0.2964 -0.3094 -0.1795 -0.4877 -0.1393 -0.2028 -0.1085 -0.0980
ATTED:At1g02180.html 65 | 66 | 67 | 68 | 84 HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA 0.07 | 0.07 | 0.09 | 0.06 | 0.07 0.2370 -0.4648 -0.9819 -0.7156 -0.5934 -0.5071 -0.3722 -0.0832 0.0632 -0.4248 -0.7224 -1.2973 -0.9326 0.3343 0.5436 -0.4440
ATTED:At1g02190.html 32 | 33 | 34 | 35 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA TATATAA | CTATATA | TCTATAT | CTCTATA 0.11 | 0.13 | 0.10 | 0.10 -1.5734 -1.6272 -1.5964 -1.7121 -1.5750 -1.8076 -1.7134 -1.6404 -1.7295 -1.6148 -1.7093 -1.8424 -1.5553 -1.5372 -1.4531 -1.5648
ATTED:At1g02205.html 31 | 32 | 43 | 44 | 67 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA 0.11 | 0.13 | 0.07 | 0.08 | 0.06 0.1961 -0.0960 -2.3471 -1.5225 -1.0292 -0.9610 -0.7252 -0.0346 1.0130 -0.9728 -0.2440 -4.2142 0.3087 0.3642 0.7504 0.5115
ATTED:At1g02260.html 117 | 118 HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC CGTGGCA | ACGTGGC 0.08 | 0.09 -0.3435 -0.1968 0.2329 0.2395 0.1699 0.1083 0.0411 -0.1246 -0.0920 0.0855 0.2118 1.0694 0.5139 -0.1667 -0.2061 -0.3565
ATTED:At1g02270.html 125 | 126 HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 0.09 | 0.09 0.1459 0.4229 0.5994 0.7654 0.9233 0.8626 0.4996 0.0400 0.1694 0.9679 1.1311 1.0023 0.6308 -0.0292 -0.0973 0.2475
ATTED:At1g02280.html 26 HeptamerElement:GATAAGG GATAAGG 0.07 1.4858 1.1206 -0.3199 -0.4022 -0.1484 0.3151 0.7416 1.1335 1.1884 0.2061 -0.1715 -1.3765 -0.7229 1.5356 1.4962 0.7728
ATTED:At1g02310.html 25 | 34 | 35 | 36 | 131 HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT 0.06 | 0.11 | 0.10 | 0.10 | 0.10 -0.5705 -0.6528 -0.2156 -0.5653 -0.4258 -0.7221 -0.7285 -0.6127 -0.5806 -0.6872 -0.8148 2.6919 -0.7164 -0.7728 -0.6095 -0.6117
ATTED:At1g02330.html 38 | 53 | 55 | 127 | 128 | 147 HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT GGCCCAT | TGGGCTT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | 0.07 -0.1689 -0.4518 -0.3052 -0.4939 -0.8119 -0.4314 -0.4818 -0.2285 -0.2502 -0.4171 -0.3064 0.0607 -0.1743 0.2451 0.3718 -0.3285
ATTED:At1g02340.html 26 HeptamerElement:CCACACA CCACACA 0.06 -1.0864 -1.0637 0.9333 0.3126 -0.9059 -1.2393 -1.3924 -1.0213 -1.0006 -1.4189 -0.2723 1.0638 -1.1177 -1.3294 -1.2650 2.2165
ATTED:At1g02360.html 30 | 31 | 32 | 52 | 53 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT 0.11 | 0.13 | 0.10 | 0.10 | 0.07 -0.3395 0.0902 -0.0499 0.2745 0.5096 0.2710 0.4790 0.1530 -0.4669 0.7073 0.5208 0.5501 -0.0446 -0.6220 -0.5421 -0.3019
ATTED:At1g02370.html 58 | 59 | 60 | 61 HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC AACCCTA | AAACCCT | TAAACCC | TTAAACC 0.11 | 0.12 | 0.08 | 0.06 0.2974 -0.2949 -0.5594 -0.6485 -0.9085 -0.8806 -0.6636 -0.2550 -0.2624 -1.1083 -1.1946 0.3532 -0.4998 0.3688 0.6705 -0.4535
ATTED:At1g02390.html 28 | 71 | 122 | 172 | 173 | 180 HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC 0.11 | 0.14 | 0.07 | 0.10 | 0.06 | 0.07 -0.4827 -0.5224 0.9447 0.5007 0.3077 -0.1887 -0.3015 -0.2902 -0.6966 -0.3774 -0.0432 2.4274 -0.1021 -0.4271 -0.4433 0.6108
ATTED:At1g02400.html 137 HeptamerElement:AATAATT AATAATT 0.06 -1.0699 -0.8430 0.1634 0.8011 1.1442 0.8318 0.6804 -0.0339 -1.3400 1.0769 1.6570 1.3740 1.2361 -0.9286 -0.9829 -0.8267
ATTED:At1g02410.html 37 | 45 | 46 | 110 | 146 HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT 0.07 | 0.08 | 0.06 | 0.06 | 0.06 -0.2179 -0.0770 -0.1929 -0.0567 -0.0057 0.0112 -0.1275 -0.1899 -0.0125 -0.0662 -0.0848 0.1191 0.0907 -0.0982 -0.2397 -0.0489
* Row count is limited to 100.