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Circadian Coexpression (DIURNAL + ATTED-II promoter motif) Full

Circadian Data collected over two days (44 hours) at four hour intervals in various growth conditions. We calculated the Phase of each data by non-linear best fit to a sine wave with a 24 hour period, and similarly calculated the Amplitude. Visually checking the 1000 largest amplitude genes showed a good fit in all cases, though a few genes clearly deviated from sinusoidal behavior. All had a major period of 24 hours. For each gene locus, we added the CEG motifs as calculated by ATTED-II. Gene Loci without expression data or motif data were removed from this database.

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_ATTED_COL_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_COL_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_DD_DDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_ATTED_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_ATTED_LDHH_SM
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_ATTED_LDHH_ST
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_ATTED_LER_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_LIGHT5_HIF138_13
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_LIGHT5_HIF138_8
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_LIGHT5_znknOX
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_LL12_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_ATTED_LL23_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_ATTED_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_ATTED_LL_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_ATTED_LL_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_ATTED_lhyox_SD
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_longday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_ATTED_lux_2_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_phyB9_SD
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_shortday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_ATTED_LL23_LDHH
#download_from http://linkdata.org/work/rdf1s330i
#namespace ATTED http://atted.jp/data/locus/
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#namespace Diurnal_Condition http://linkdata.org/work/rdf1s290i/Diurnal_condition.html#
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#namespace Whole_Plant http://linkdata.org/work/rdf1s220i/Whole_Plant.html#
#property motif position motif motif sequence CEG Probe Condition Phase Correlation label:Expression 0 hours label:Expression 4 hours label:Expression 8 hours label:Expression 12 hours label:Expression 16 hours label:Expression 20 hours label:Expression 24 hours label:Expression 28 hours label:Expression 32 hours label:Expression 36 hours label:Expression 40 hours label:Expression 44 hours Sine Phase Sine Amplitude
#object_type_xsd float string string float string string int float float float float float float float float float float float float float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
ATTED:At3g46290.html 13 | 78 | 79 | 80 | 81 HeptamerElement:TCTCTAT | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC TCTCTAT | ACCCTAA | AACCCTA | AAACCCT | AAAACCC 0.07 | 0.07 | 0.08 | 0.08 | 0.07 252512_at Circadian_Condition:LL23_LDHH 6 0.598109 50.460200 57.358800 64.362200 46.446500 28.259300 31.177900 30.677000 34.609100 33.405000 27.235300 34.776600 22.739500 0.000213 5.252573
ATTED:At3g52060.html 47 | 74 | 75 HeptamerElement:TCTCTAT | HeptamerElement:AGTCAAC | HeptamerElement:AAGTCAA TCTCTAT | AGTCAAC | AAGTCAA 0.06 | 0.07 | 0.06 252040_at Circadian_Condition:LL23_LDHH 6 0.906340 762.306000 816.979000 848.284000 771.924000 624.209000 555.803000 738.430000 793.759000 730.601000 691.042000 516.247000 477.079000 0.000393 73.344053
ATTED:At4g22710.html 51 | 52 HeptamerElement:TATAAAT | HeptamerElement:ATATAAA TATAAAT | ATATAAA 0.10 | 0.08 254331_s_at Circadian_Condition:LL23_LDHH 6 0.941460 343.643000 650.380000 695.572000 403.782000 402.197000 360.921000 504.591000 631.295000 605.230000 399.932000 411.300000 382.341000 0.000692 74.024822
ATTED:At3g53340.html 9 | 10 | 11 HeptamerElement:AGGGTTT | HeptamerElement:TAGGGTT | HeptamerElement:CTAGGGT AGGGTTT | TAGGGTT | CTAGGGT 0.08 | 0.08 | 0.06 251991_at Circadian_Condition:LL23_LDHH 23 0.288078 40.918100 60.708900 44.579200 55.721700 61.815200 62.595000 60.861000 50.702700 53.254300 55.392500 33.830400 38.119600 0.003954 0.929888
ATTED:At4g39070.html 33 HeptamerElement:CTATATA CTATATA 0.13 252924_at Circadian_Condition:LL23_LDHH 5 0.658430 4.288040 7.864320 4.717850 6.396150 5.057120 4.847970 5.770840 6.683370 6.987420 4.286300 6.464950 5.068710 0.004631 0.347436
ATTED:At1g50940.html 62 HeptamerElement:TATAAAC TATAAAC 0.06 256209_at Circadian_Condition:LL23_LDHH 6 0.652720 114.985000 113.892000 95.415800 119.131000 87.387000 89.033500 87.517900 101.240000 109.384000 92.864000 83.978400 90.814500 0.005436 4.959328
ATTED:At4g15350.html 53 HeptamerElement:CATGCAT CATGCAT 0.06 245551_at Circadian_Condition:LL23_LDHH 6 0.498573 4.389400 5.950840 4.659160 5.285570 5.467360 6.314270 5.083550 5.789720 7.136250 4.705220 4.179500 4.414880 0.005751 0.228051
ATTED:At4g04630.html 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 43 | 62 HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATCTTAT | HeptamerElement:TGACTTT TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATCTTAT | TGACTTT 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.06 | 0.06 255285_at Circadian_Condition:LL23_LDHH 5 0.936925 13.593200 54.934600 45.588800 29.290800 16.709100 14.214900 18.059100 66.435400 33.697200 20.520600 15.675800 11.991100 0.006413 10.252680
ATTED:At4g26560.html 39 | 40 HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT CTCTCTT | TCTCTCT 0.07 | 0.06 253968_at Circadian_Condition:LL23_LDHH 20 0.505938 3.951130 4.609000 3.744240 4.554710 3.951950 4.455710 4.108890 4.040900 4.072620 4.383510 4.222220 4.638880 0.008084 0.057879
ATTED:At5g17190.html 62 | 63 | 73 | 82 | 83 | 108 | 109 | 110 | 111 | 112 HeptamerElement:CCACGTG | HeptamerElement:GCCACGT | HeptamerElement:CCACACA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:TAGGCCC CCACGTG | GCCACGT | CCACACA | ACGCGTA | GACGCGT | CCCATTA | GCCCATT | GGCCCAT | AGGCCCA | TAGGCCC 0.07 | 0.07 | 0.06 | 0.10 | 0.06 | 0.07 | 0.09 | 0.09 | 0.09 | 0.06 250096_at Circadian_Condition:LL23_LDHH 4 0.699181 1364.200000 1061.630000 1112.050000 1021.770000 976.114000 709.833000 972.402000 998.822000 1212.290000 1036.020000 974.418000 943.857000 0.008775 56.332936
ATTED:At1g70420.html 29 | 30 | 31 | 43 | 137 HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAATATC | HeptamerElement:GATATTT ATATAAA | TATATAA | ATATATA | AAATATC | GATATTT 0.08 | 0.11 | 0.10 | 0.11 | 0.08 264314_at Circadian_Condition:LL23_LDHH 5 0.940295 20.209500 60.458700 45.659200 27.485000 24.429900 12.361600 23.497100 72.991300 49.685000 28.815100 24.956900 23.404600 0.010775 10.366452
ATTED:At1g75770.html 107 | 108 | 109 | 110 | 111 HeptamerElement:CGTGTCA | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT CGTGTCA | ACGTGTC | CACGTGT | ACACGTG | GACACGT 0.07 | 0.09 | 0.10 | 0.10 | 0.08 262952_at Circadian_Condition:LL23_LDHH 4 0.539237 10.288400 10.106600 6.764940 9.390930 7.386620 7.517490 7.230070 7.780370 10.486400 8.439430 8.187640 8.024600 0.011142 0.290261
ATTED:At4g26240.html 51 | 121 | 146 HeptamerElement:TGGGCTT | HeptamerElement:GCCCATT | HeptamerElement:AGGCCCA TGGGCTT | GCCCATT | AGGCCCA 0.07 | 0.07 | 0.06 254010_at Circadian_Condition:LL23_LDHH 4 0.670796 44.758500 63.639000 36.302600 60.551300 38.393300 37.947600 38.232700 55.448400 51.106500 39.310900 33.855700 36.002200 0.013273 4.351638
ATTED:At1g10530.html 56 | 57 HeptamerElement:TATAAAA | HeptamerElement:ATATAAA TATAAAA | ATATAAA 0.06 | 0.08 257450_at Circadian_Condition:LL23_LDHH 5 0.621989 6.415120 6.704820 5.750980 6.119550 4.430260 5.393560 5.775550 6.313310 6.389740 6.363820 7.138600 5.869070 0.013474 0.167964
ATTED:At2g18670.html 48 | 49 | 140 | 141 HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GATATTT | HeptamerElement:AGATATT AAGCCCA | AAAGCCC | GATATTT | AGATATT 0.08 | 0.06 | 0.08 | 0.09 266016_at Circadian_Condition:LL23_LDHH 6 0.940962 21.994100 74.775200 65.851600 38.208400 22.061500 25.470000 31.453400 72.156600 54.549700 32.617200 18.897500 22.442900 0.015716 12.879437
ATTED:At3g14150.html 27 | 30 | 31 | 39 HeptamerElement:ATCTTAT | HeptamerElement:CTTATCT | HeptamerElement:CCTTATC | HeptamerElement:TTGACTT ATCTTAT | CTTATCT | CCTTATC | TTGACTT 0.07 | 0.08 | 0.10 | 0.07 257004_s_at Circadian_Condition:LL23_LDHH 7 0.846729 31.711300 36.218000 50.563900 33.142800 31.344400 32.143100 43.526600 49.859400 49.631900 37.095400 31.077600 33.961800 0.016654 4.167520
ATTED:At1g29140.html 147 | 148 HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 0.08 | 0.09 260888_at Circadian_Condition:LL23_LDHH 4 0.655585 3.194440 3.846780 3.253930 3.550110 3.070800 3.249190 3.292520 3.382840 3.360060 3.339640 3.255260 3.256840 0.021758 0.073001
ATTED:At5g65560.html 73 | 82 | 83 | 84 | 85 | 86 | 102 | 103 | 104 HeptamerElement:TAAACCC | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:TAGGCCC | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT TAAACCC | CCCATTA | GCCCATT | GGCCCAT | AGGCCCA | TAGGCCC | CCCATTA | GCCCATT | AGCCCAT 0.06 | 0.07 | 0.10 | 0.10 | 0.11 | 0.08 | 0.07 | 0.09 | 0.08 247141_at Circadian_Condition:LL23_LDHH 4 0.303116 14.808100 13.800000 14.066800 13.831200 12.789500 13.202700 9.408040 13.441900 8.322390 12.029900 11.834100 9.837540 0.023059 0.141977
ATTED:At1g49210.html 71 | 72 | 74 | 80 | 103 HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:CTATATA | HeptamerElement:CTCATGC | HeptamerElement:CCCATTA TATATAA | ATATATA | CTATATA | CTCATGC | CCCATTA 0.07 | 0.06 | 0.06 | 0.06 | 0.07 260748_at Circadian_Condition:LL23_LDHH 5 0.765188 5.163320 6.008430 5.750400 5.625280 5.332640 4.889280 4.617500 6.805410 4.944850 4.515110 5.582610 4.591490 0.024815 0.224671
ATTED:At1g26800.html 33 | 45 | 46 HeptamerElement:TGGATAA | HeptamerElement:GATATTT | HeptamerElement:AGATATT TGGATAA | GATATTT | AGATATT 0.06 | 0.10 | 0.10 261265_at Circadian_Condition:LL23_LDHH 6 0.912893 16.456400 27.336400 21.953000 18.574300 12.345500 10.302600 13.485800 30.888200 28.274200 13.303700 12.220200 9.347270 0.027122 4.635967
ATTED:At3g61960.html 73 | 74 HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 0.09 | 0.09 251273_at Circadian_Condition:LL23_LDHH 6 0.774787 60.066700 70.712300 81.815100 54.913300 43.268200 45.220700 68.014500 75.843500 66.784600 76.230700 56.824300 61.938100 0.027676 6.344106
ATTED:At1g09640.html 17 | 18 | 19 HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC AACCCTA | AAACCCT | AAAACCC 0.13 | 0.14 | 0.09 264670_s_at Circadian_Condition:LL23_LDHH 4 0.411538 5530.710000 4808.430000 4990.380000 4667.050000 5018.330000 4697.350000 4453.830000 4966.660000 4960.360000 4931.710000 4968.470000 4688.960000 0.028635 25.456089
ATTED:At5g03370.html 138 HeptamerElement:GATATTT GATATTT 0.09 250925_at Circadian_Condition:LL23_LDHH 6 0.685105 17.194800 29.594200 20.194700 20.220700 18.268100 20.849200 28.060600 29.790000 41.332200 25.506100 17.442700 17.322100 0.029307 3.394126
ATTED:At4g11280.html 28 | 29 | 30 | 31 | 32 | 164 HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA | HeptamerElement:AAGTCAA ATATATA | TATATAT | CTATATA | TCTATAT | CTCTATA | AAGTCAA 0.10 | 0.10 | 0.13 | 0.10 | 0.10 | 0.06 254926_at Circadian_Condition:LL23_LDHH 19 0.766636 17.437700 14.622700 12.897000 12.025700 15.919600 14.156000 14.875600 10.578100 14.819100 18.051300 16.628600 16.300100 0.029469 0.728017
ATTED:At3g26700.html 85 HeptamerElement:ACCCCAC ACCCCAC 0.06 257825_at Circadian_Condition:LL23_LDHH 19 0.737082 11.810000 12.076300 10.336200 11.641600 11.626900 11.584000 10.723900 8.984660 9.778090 11.001200 12.499500 11.723700 0.031651 0.451709
ATTED:At5g40410.html 118 HeptamerElement:AAGTCAA AAGTCAA 0.07 249412_at Circadian_Condition:LL23_LDHH 19 0.638705 7.129420 7.557640 7.998560 6.760280 7.225670 8.489980 6.649660 8.246710 7.277470 8.340870 8.230850 9.053480 0.033178 0.138540
ATTED:At4g30600.html 58 | 59 | 60 | 61 | 62 | 66 | 67 | 68 HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:CTATATA | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC ATATATA | TATATAT | ATATATA | TATATAT | CTATATA | AACCCTA | AAACCCT | AAAACCC 0.09 | 0.09 | 0.09 | 0.09 | 0.13 | 0.10 | 0.11 | 0.08 253625_at Circadian_Condition:LL23_LDHH 5 0.677910 825.207000 906.348000 883.094000 841.588000 786.467000 829.810000 880.394000 984.655000 850.539000 910.695000 886.499000 773.708000 0.034471 25.126730
ATTED:At1g34370.html 38 | 68 HeptamerElement:TTGACTT | HeptamerElement:TATATAA TTGACTT | TATATAA 0.07 | 0.09 259932_at Circadian_Condition:LL23_LDHH 6 0.819100 859.956000 1038.300000 987.337000 883.650000 879.000000 736.569000 866.797000 924.668000 867.352000 844.358000 698.557000 722.659000 0.035471 56.357012
ATTED:At3g09780.html 128 HeptamerElement:AAAATAT AAAATAT 0.07 258704_at Circadian_Condition:LL23_LDHH 5 0.753041 17.761000 16.907700 22.102600 17.685200 17.098600 17.180200 21.616600 21.011800 24.622800 17.823100 14.125600 14.724700 0.039624 1.552853
ATTED:At3g18370.html 55 HeptamerElement:AAATATC AAATATC 0.11 257734_at Circadian_Condition:LL23_LDHH 5 0.895328 81.016800 87.550700 99.491500 69.070400 66.695900 56.133500 79.872300 92.024200 84.534900 74.529500 64.722800 42.726000 0.040232 9.622300
ATTED:At2g15230.html 30 HeptamerElement:TATAAAC TATAAAC 0.07 263359_at Circadian_Condition:LL23_LDHH 6 0.579361 120.347000 139.202000 111.751000 155.979000 101.833000 86.014200 101.686000 137.305000 92.006000 108.770000 81.350600 107.781000 0.044205 7.454466
ATTED:At2g20230.html 88 HeptamerElement:AAATATC AAATATC 0.14 265284_at Circadian_Condition:LL23_LDHH 7 0.811513 851.007000 1114.410000 867.516000 989.922000 772.906000 667.877000 800.287000 1039.800000 863.393000 818.000000 705.007000 677.993000 0.045707 76.600812
ATTED:At1g80830.html 8 | 9 | 10 | 79 HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:CTTATCC TATATAT | ATATATA | TATATAT | CTTATCC 0.10 | 0.10 | 0.10 | 0.09 261895_at Circadian_Condition:LL23_LDHH 6 0.737596 480.513000 701.141000 631.444000 538.443000 578.667000 630.875000 509.426000 571.675000 661.179000 472.820000 476.176000 477.541000 0.048701 29.027201
ATTED:At1g26540.html 45 | 114 | 115 | 125 | 144 | 193 HeptamerElement:ATAAATA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:TTGGGCT | HeptamerElement:TGGGCTT | HeptamerElement:AAAAGTC ATAAATA | GGCCCAA | AGGCCCA | TTGGGCT | TGGGCTT | AAAAGTC 0.08 | 0.06 | 0.09 | 0.07 | 0.06 | 0.07 261000_at Circadian_Condition:LL23_LDHH 20 0.881500 5.504810 6.521400 7.172320 6.848480 6.347880 8.607970 6.486380 6.446300 6.310830 7.186360 6.371920 8.632670 0.051467 0.253306
ATTED:At3g05200.html 49 HeptamerElement:TGGATAA TGGATAA 0.06 259312_at Circadian_Condition:LL23_LDHH 3 0.639043 70.640300 59.253500 61.864100 48.061900 53.005000 51.046100 47.612600 46.012100 61.969500 61.624300 39.793100 42.077200 0.056659 3.116432
ATTED:At4g37560.html 43 | 44 | 145 HeptamerElement:GATAAGG | HeptamerElement:AGATAAG | HeptamerElement:ACGTGTC GATAAGG | AGATAAG | ACGTGTC 0.07 | 0.08 | 0.08 253048_at Circadian_Condition:LL23_LDHH 19 0.730978 93.539100 41.542600 29.272300 73.397700 66.162600 104.730000 92.723000 44.484500 44.014200 77.468200 221.315000 90.831100 0.057107 23.365458
ATTED:At3g46560.html 31 | 32 | 33 | 51 | 52 | 53 | 62 | 63 | 108 HeptamerElement:AGGGTTT | HeptamerElement:TAGGGTT | HeptamerElement:CTAGGGT | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GGGCCTA AGGGTTT | TAGGGTT | CTAGGGT | GCCCAAT | GGCCCAA | AGGCCCA | AAGCCCA | AAAGCCC | GGGCCTA 0.10 | 0.09 | 0.06 | 0.07 | 0.08 | 0.10 | 0.08 | 0.07 | 0.07 252479_at Circadian_Condition:LL23_LDHH 19 0.734578 971.894000 902.633000 840.724000 911.397000 917.076000 976.567000 899.596000 665.153000 864.871000 887.511000 923.805000 846.479000 0.059173 28.188612
ATTED:At3g50740.html 31 | 32 | 33 | 34 HeptamerElement:TATATAT | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:TTCTATA TATATAT | CTATATA | TCTATAT | TTCTATA 0.10 | 0.13 | 0.10 | 0.06 252183_at Circadian_Condition:LL23_LDHH 5 0.736484 392.118000 918.591000 484.696000 658.698000 627.038000 547.809000 515.745000 736.507000 798.922000 453.110000 340.431000 429.231000 0.059529 71.759424
ATTED:At3g17880.html 76 | 87 HeptamerElement:TAACGCG | HeptamerElement:CGCGGTT TAACGCG | CGCGGTT 0.07 | 0.07 258219_at Circadian_Condition:LL23_LDHH 5 0.911112 94.440300 199.132000 171.177000 122.236000 110.512000 129.973000 105.344000 216.351000 167.164000 143.112000 96.024900 122.465000 0.060461 21.281567
ATTED:At4g05460.html 73 | 74 | 95 | 96 | 97 | 98 HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC GCCCAAA | GGCCCAA | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC 0.07 | 0.08 | 0.07 | 0.08 | 0.10 | 0.08 255231_at Circadian_Condition:LL23_LDHH 5 0.814980 74.974900 103.033000 69.759800 85.004700 68.694300 59.399600 66.175300 93.241600 77.867900 73.569500 64.609400 57.513600 0.061000 6.762024
ATTED:At4g30270.html 4 | 5 | 7 | 54 | 87 | 88 | 93 | 111 HeptamerElement:TATATAT | HeptamerElement:CTATATA | HeptamerElement:CACTATA | HeptamerElement:CTCTCTT | HeptamerElement:ATATCTT | HeptamerElement:AATATCT | HeptamerElement:CATGCAA | HeptamerElement:CAGCTGT TATATAT | CTATATA | CACTATA | CTCTCTT | ATATCTT | AATATCT | CATGCAA | CAGCTGT 0.10 | 0.14 | 0.07 | 0.07 | 0.07 | 0.13 | 0.08 | 0.07 253666_at Circadian_Condition:LL23_LDHH 6 0.900793 514.951000 723.333000 659.562000 539.321000 359.199000 236.661000 437.782000 601.265000 481.193000 442.440000 279.887000 239.031000 0.061402 97.481950
ATTED:At1g74940.html 48 | 49 | 50 HeptamerElement:TATAAAC | HeptamerElement:CTATAAA | HeptamerElement:TCTATAA TATAAAC | CTATAAA | TCTATAA 0.07 | 0.09 | 0.07 262170_at Circadian_Condition:LL23_LDHH 5 0.898134 33.491100 125.261000 100.390000 62.367900 50.080700 25.615100 56.803700 113.343000 74.725900 47.745400 32.209900 24.669900 0.063958 20.292687
ATTED:At1g79220.html 22 HeptamerElement:TCTCTCT TCTCTCT 0.06 264093_at Circadian_Condition:LL23_LDHH 5 0.691653 6.153180 6.276180 6.913750 6.169920 5.211800 5.787730 6.355110 6.065180 6.324230 5.539980 6.273990 4.898150 0.064548 0.245963
ATTED:At1g68070.html 10 HeptamerElement:TCTCTAT TCTCTAT 0.07 260008_at Circadian_Condition:LL23_LDHH 20 0.564514 135.975000 157.155000 108.048000 136.932000 119.142000 119.483000 125.867000 99.044200 101.743000 143.398000 138.511000 127.600000 0.064755 2.796639
ATTED:At5g53310.html 30 | 109 | 110 HeptamerElement:TCTCTCT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT TCTCTCT | ACGCGTT | AACGCGT 0.06 | 0.10 | 0.08 248264_at Circadian_Condition:LL23_LDHH 5 0.674127 201.585000 324.073000 187.681000 214.282000 182.536000 133.081000 149.722000 201.581000 202.189000 154.752000 211.136000 152.625000 0.071303 17.045339
ATTED:At5g61590.html 84 | 164 HeptamerElement:GACTTTT | HeptamerElement:AAATATC GACTTTT | AAATATC 0.07 | 0.08 247540_at Circadian_Condition:LL23_LDHH 6 0.975335 67.968300 560.079000 537.563000 187.596000 56.366500 20.800500 105.948000 638.720000 495.081000 80.842400 34.514100 22.440600 0.074151 151.389652
ATTED:At1g12970.html 81 HeptamerElement:TTATCCA TTATCCA 0.07 261213_at Circadian_Condition:LL23_LDHH 5 0.721665 9.171340 7.782160 11.122400 7.565650 7.645650 8.152930 9.082240 9.495060 9.380070 9.079870 7.085580 6.288810 0.076506 0.621261
ATTED:At1g67910.html 30 | 31 | 133 | 134 HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT TATAAAT | ATATAAA | TGGGCTT | ATGGGCT 0.10 | 0.08 | 0.08 | 0.06 259996_at Circadian_Condition:LL23_LDHH 7 0.740732 117.032000 175.587000 134.376000 166.875000 130.670000 103.761000 160.489000 166.301000 147.534000 112.178000 111.604000 74.505600 0.076952 14.671817
ATTED:At2g17640.html 40 | 63 HeptamerElement:ATATATA | HeptamerElement:AGATAAG ATATATA | AGATAAG 0.10 | 0.07 264594_at Circadian_Condition:LL23_LDHH 6 0.515089 59.373500 68.281100 72.973900 42.777400 52.256000 53.582300 49.439500 46.342600 56.631100 62.149900 53.358200 58.305200 0.077271 1.929250
ATTED:At4g16900.html 21 HeptamerElement:CTTATCT CTTATCT 0.08 245453_at Circadian_Condition:LL23_LDHH 19 0.675227 6.571080 5.737260 6.997820 6.191980 6.767500 6.958920 5.745650 6.143540 5.197830 7.211850 6.488510 8.618690 0.077615 0.343390
ATTED:At5g20270.html 17 HeptamerElement:CAGCTGT CAGCTGT 0.07 246097_at Circadian_Condition:LL23_LDHH 20 0.723876 139.737000 151.965000 69.312400 161.028000 156.635000 136.243000 86.727600 139.375000 86.511400 109.342000 158.008000 126.066000 0.078636 9.368642
ATTED:At2g28370.html 80 HeptamerElement:AAAATAT AAAATAT 0.06 265281_at Circadian_Condition:LL23_LDHH 6 0.703278 388.387000 509.547000 400.827000 471.600000 354.823000 400.625000 368.074000 434.490000 484.440000 305.801000 289.873000 205.765000 0.081668 41.738829
ATTED:At2g18500.html 31 | 32 | 33 | 49 | 105 | 141 HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATAAA | HeptamerElement:ATGTCGG | HeptamerElement:CAGCTGT ATATATA | TATATAT | ATATATA | ATATAAA | ATGTCGG | CAGCTGT 0.10 | 0.10 | 0.10 | 0.08 | 0.06 | 0.08 265951_at Circadian_Condition:LL23_LDHH 19 0.390751 6.201180 7.543380 6.887510 7.422000 6.410670 8.660240 7.655730 6.967950 8.057370 6.664500 8.724340 7.306540 0.081683 0.118787
ATTED:At2g29320.html 15 | 41 | 69 | 85 | 86 HeptamerElement:CTTATCT | HeptamerElement:CCACACA | HeptamerElement:TCTCTCT | HeptamerElement:GATATTT | HeptamerElement:AGATATT CTTATCT | CCACACA | TCTCTCT | GATATTT | AGATATT 0.08 | 0.06 | 0.06 | 0.10 | 0.08 266291_at Circadian_Condition:LL23_LDHH 5 0.798939 54.692600 122.277000 80.326200 80.002800 59.077000 37.985800 67.000100 88.686200 59.456400 64.751300 62.221600 53.000300 0.083680 9.994968
ATTED:At2g15570.html 38 HeptamerElement:TCTCTCT TCTCTCT 0.06 265476_at Circadian_Condition:LL23_LDHH 7 0.822981 88.590100 125.958000 123.685000 106.178000 106.182000 86.484200 98.862900 130.680000 121.461000 83.627600 43.793300 48.458300 0.083840 15.654741
ATTED:At5g58670.html 40 | 41 | 108 HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:AATAATT TATAAAT | ATATAAA | AATAATT 0.10 | 0.08 | 0.06 247794_at Circadian_Condition:LL23_LDHH 5 0.732192 14.123600 12.271100 16.047100 12.859000 10.526900 11.120100 12.318800 16.370400 15.589800 11.497000 13.668500 11.375500 0.084775 0.980828
ATTED:At2g33360.html 86 HeptamerElement:CCACACA CCACACA 0.06 255832_at Circadian_Condition:LL23_LDHH 19 0.451484 9.973010 11.181700 10.191500 10.923300 9.669660 16.753800 11.808000 11.507200 9.759200 12.645100 14.296700 7.818260 0.086301 0.425819
ATTED:At2g39770.html 31 | 32 | 33 | 147 HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:AAGTCAA TATAAAC | ATATAAA | TATATAA | AAGTCAA 0.07 | 0.08 | 0.11 | 0.07 245060_at Circadian_Condition:LL23_LDHH 19 0.574484 478.613000 580.214000 387.265000 655.675000 688.273000 568.184000 584.236000 547.529000 507.012000 586.072000 455.760000 685.372000 0.086931 27.111379
ATTED:At5g16470.html 28 HeptamerElement:ATAAATA ATAAATA 0.08 250119_at Circadian_Condition:LL23_LDHH 7 0.703952 787.882000 966.009000 724.491000 939.243000 836.771000 672.197000 935.032000 948.573000 865.175000 826.520000 802.748000 708.575000 0.088974 34.936065
ATTED:At2g40630.html 32 | 44 HeptamerElement:ATATAAA | HeptamerElement:GATATTT ATATAAA | GATATTT 0.08 | 0.10 255828_at Circadian_Condition:LL23_LDHH 6 0.839714 8.852060 10.346000 9.665830 9.338870 7.306760 8.706890 8.260350 9.275190 10.044300 8.194430 8.286380 7.511530 0.089560 0.542841
ATTED:At4g26550.html 33 HeptamerElement:TTGACTT TTGACTT 0.07 253967_at Circadian_Condition:LL23_LDHH 7 0.876700 11.248000 12.648600 10.762600 11.742800 10.533700 9.685810 12.306600 12.101800 11.429300 11.571800 11.014800 8.526250 0.091472 0.518446
ATTED:At2g47180.html 76 | 77 | 78 HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:TACACGT CACGTGT | ACACGTG | TACACGT 0.10 | 0.10 | 0.07 263320_at Circadian_Condition:LL23_LDHH 4 0.960484 102.133000 132.700000 98.878300 43.332900 13.397400 21.987000 56.682400 88.786100 156.688000 103.158000 47.163700 32.789000 0.092753 26.112251
ATTED:At5g55940.html 8 | 9 | 10 | 59 | 67 | 68 | 69 HeptamerElement:GGGTTTT | HeptamerElement:AGGGTTT | HeptamerElement:TAGGGTT | HeptamerElement:TCTATAA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT GGGTTTT | AGGGTTT | TAGGGTT | TCTATAA | TGACTTT | TTGACTT | TTTGACT 0.07 | 0.08 | 0.08 | 0.07 | 0.07 | 0.08 | 0.07 248041_at Circadian_Condition:LL23_LDHH 3 0.549033 270.634000 363.256000 172.851000 400.250000 250.671000 212.393000 266.977000 314.578000 231.452000 246.471000 229.738000 204.945000 0.092792 13.311130
ATTED:At3g60340.html 44 | 61 | 113 HeptamerElement:GATAAGA | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT GATAAGA | ACACGTG | CACGTGT 0.07 | 0.10 | 0.10 251408_at Circadian_Condition:LL23_LDHH 4 0.763744 250.402000 363.889000 268.141000 283.016000 174.427000 224.091000 196.244000 352.124000 200.399000 294.629000 201.390000 147.181000 0.096114 31.581242
ATTED:At5g49760.html 150 | 151 HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 0.08 | 0.09 248568_at Circadian_Condition:LL23_LDHH 7 0.798498 432.681000 539.182000 693.707000 412.974000 413.512000 392.071000 438.262000 546.755000 435.923000 437.670000 335.176000 326.343000 0.098298 54.033700
ATTED:At2g19810.html 85 | 88 | 173 HeptamerElement:CGCGGTT | HeptamerElement:AACCGCG | HeptamerElement:AAATATC CGCGGTT | AACCGCG | AAATATC 0.07 | 0.09 | 0.08 266695_at Circadian_Condition:LL23_LDHH 4 0.924044 309.098000 358.054000 341.121000 200.083000 179.795000 112.589000 268.582000 292.023000 345.530000 342.988000 206.793000 212.779000 0.100844 45.104754
ATTED:At1g47655.html 34 | 35 | 36 | 37 | 38 HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA ATATAAA | TATATAA | CTATATA | TCTATAT | CTCTATA 0.08 | 0.11 | 0.13 | 0.10 | 0.09 262443_at Circadian_Condition:LL23_LDHH 4 0.736221 9.221100 17.003300 10.322200 11.359800 14.198500 10.606300 12.206300 19.166200 13.453900 13.328600 16.363900 13.855700 0.102596 0.355285
ATTED:At1g75960.html 57 | 147 | 148 HeptamerElement:TGGGCTT | HeptamerElement:AATATCT | HeptamerElement:AAATATC TGGGCTT | AATATCT | AAATATC 0.07 | 0.08 | 0.09 262698_at Circadian_Condition:LL23_LDHH 6 0.914089 5.446080 11.241900 11.907300 5.258190 4.924430 6.121510 5.803610 7.636370 10.153600 5.660240 5.339220 5.781860 0.103401 1.355260
ATTED:At5g56180.html 106 | 126 | 127 | 128 | 129 | 189 HeptamerElement:TACACGT | HeptamerElement:CGTGTCA | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:AAATATC TACACGT | CGTGTCA | ACGTGTC | CACGTGT | ACACGTG | AAATATC 0.08 | 0.06 | 0.08 | 0.09 | 0.08 | 0.08 248002_at Circadian_Condition:LL23_LDHH 5 0.786411 31.574600 47.399600 27.032600 34.258800 21.628100 19.374400 21.252300 38.247600 35.121800 29.444500 27.172900 25.124200 0.103657 3.934792
ATTED:At3g20100.html 37 | 126 HeptamerElement:GATAAGA | HeptamerElement:ACGTGTC GATAAGA | ACGTGTC 0.07 | 0.08 257129_at Circadian_Condition:LL23_LDHH 2 0.453324 64.949800 61.362500 55.364200 40.854500 57.688200 56.618800 42.121400 41.263900 45.554800 65.377600 19.903300 14.911000 0.108409 3.929304
ATTED:At4g35970.html 32 HeptamerElement:TATATAT TATATAT 0.10 253112_at Circadian_Condition:LL23_LDHH 6 0.504774 8.926040 9.285750 8.138410 8.148760 8.589250 7.682590 9.959720 7.648610 7.731980 11.240900 6.726130 7.459300 0.110184 0.169485
ATTED:At1g73260.html 28 | 29 | 30 | 96 | 97 | 115 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:AACGTGT | HeptamerElement:AAACGTG | HeptamerElement:AAAATAT ATAAATA | TATAAAT | ATATAAA | AACGTGT | AAACGTG | AAAATAT 0.08 | 0.10 | 0.08 | 0.07 | 0.06 | 0.07 260101_at Circadian_Condition:LL23_LDHH 6 0.671241 907.418000 666.203000 376.600000 736.278000 285.123000 162.980000 192.106000 480.123000 416.091000 458.815000 201.107000 101.002000 0.110811 85.830726
ATTED:At2g38420.html 59 | 80 | 81 | 82 | 98 | 99 HeptamerElement:ACCGACA | HeptamerElement:GGGCTTT | HeptamerElement:TGGGCTT | HeptamerElement:TTGGGCT | HeptamerElement:GGGCTTT | HeptamerElement:TGGGCTT ACCGACA | GGGCTTT | TGGGCTT | TTGGGCT | GGGCTTT | TGGGCTT 0.07 | 0.07 | 0.09 | 0.07 | 0.06 | 0.09 267031_at Circadian_Condition:LL23_LDHH 5 0.464723 9.860810 12.822800 13.684500 8.983520 10.503600 8.235020 10.420300 7.187470 9.076060 8.838750 8.265970 7.964010 0.113917 0.563328
ATTED:At1g78200.html 50 | 51 | 138 HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:AAGTCAA TATAAAT | ATATAAA | AAGTCAA 0.10 | 0.08 | 0.07 260057_at Circadian_Condition:LL23_LDHH 19 0.726786 279.506000 265.940000 279.099000 193.491000 313.006000 423.136000 231.709000 211.112000 342.469000 310.684000 341.589000 344.792000 0.116411 23.386545
ATTED:At3g27430.html 92 | 93 | 94 | 95 | 116 | 117 HeptamerElement:GCCCATT | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC GCCCATT | GGCCCAT | AGGCCCA | AAGGCCC | ATGGGCT | AATGGGC 0.10 | 0.10 | 0.11 | 0.08 | 0.07 | 0.07 257711_at Circadian_Condition:LL23_LDHH 20 0.688080 267.536000 310.661000 260.109000 323.413000 303.103000 297.972000 284.712000 306.383000 254.750000 276.378000 290.615000 286.173000 0.118673 3.318479
ATTED:At3g45960.html 10 | 30 | 95 | 129 | 130 | 131 | 132 | 193 | 194 | 195 HeptamerElement:CTCTCTT | HeptamerElement:TATATAA | HeptamerElement:AGATATT | HeptamerElement:CGCGTAA | HeptamerElement:ACGCGTA | HeptamerElement:AACGCGT | HeptamerElement:AAACGCG | HeptamerElement:CGCGTAA | HeptamerElement:ACGCGTA | HeptamerElement:AACGCGT CTCTCTT | TATATAA | AGATATT | CGCGTAA | ACGCGTA | AACGCGT | AAACGCG | CGCGTAA | ACGCGTA | AACGCGT 0.06 | 0.11 | 0.09 | 0.07 | 0.10 | 0.10 | 0.07 | 0.06 | 0.10 | 0.06 252557_at Circadian_Condition:LL23_LDHH 19 0.694898 5.582730 5.685090 5.656460 6.315780 6.855800 6.370960 5.314130 6.010050 5.319960 6.386850 5.393660 8.522450 0.122704 0.322856
ATTED:At1g17340.html 142 | 143 HeptamerElement:CCGCGTA | HeptamerElement:ACCGCGT CCGCGTA | ACCGCGT 0.07 | 0.09 261060_at Circadian_Condition:LL23_LDHH 6 0.730023 29.934000 26.720400 32.930200 29.110500 26.572800 22.677900 31.344100 25.287400 25.393400 27.687100 21.247700 21.474100 0.122879 1.325625
ATTED:At1g72250.html 49 | 50 | 63 | 64 HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTATA | HeptamerElement:TCTCTAT CTCTCTT | TCTCTCT | CTCTATA | TCTCTAT 0.07 | 0.07 | 0.09 | 0.06 259851_at Circadian_Condition:LL23_LDHH 3 0.569816 7.827680 9.936100 12.256100 9.639010 8.384430 12.119500 9.576890 9.935300 10.891000 9.268570 8.341240 10.693800 0.122971 0.251244
ATTED:At3g26470.html 36 HeptamerElement:CTCTATA CTCTATA 0.09 256877_at Circadian_Condition:LL23_LDHH 6 0.616629 42.851800 59.125600 47.543600 44.711200 52.929900 37.076400 60.898900 57.392100 68.099300 55.726100 41.729400 47.078500 0.124091 3.851977
* Row count is limited to 100.