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Circadian Coexpression (DIURNAL + ATTED-II promoter motif) Full

Circadian Data collected over two days (44 hours) at four hour intervals in various growth conditions. We calculated the Phase of each data by non-linear best fit to a sine wave with a 24 hour period, and similarly calculated the Amplitude. Visually checking the 1000 largest amplitude genes showed a good fit in all cases, though a few genes clearly deviated from sinusoidal behavior. All had a major period of 24 hours. For each gene locus, we added the CEG motifs as calculated by ATTED-II. Gene Loci without expression data or motif data were removed from this database.

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_ATTED_COL_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_COL_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_DD_DDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_ATTED_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_ATTED_LDHH_SM
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_ATTED_LDHH_ST
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_ATTED_LER_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_LIGHT5_HIF138_13
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_LIGHT5_HIF138_8
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_LIGHT5_znknOX
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_LL12_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_ATTED_LL23_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_ATTED_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_ATTED_LL_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_ATTED_LL_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_ATTED_lhyox_SD
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_longday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_ATTED_lux_2_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_ATTED_phyB9_SD
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_ATTED_shortday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
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#file_name DiurnalHours_ATTED_lhyox_SD
#download_from http://linkdata.org/work/rdf1s330i
#namespace ATTED http://atted.jp/data/locus/
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#namespace Diurnal_Condition http://linkdata.org/work/rdf1s290i/Diurnal_condition.html#
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#namespace Whole_Plant http://linkdata.org/work/rdf1s220i/Whole_Plant.html#
#property motif position motif motif sequence CEG Probe Condition Phase Correlation label:Expression 0 hours label:Expression 4 hours label:Expression 8 hours label:Expression 12 hours label:Expression 16 hours label:Expression 20 hours label:Expression 24 hours label:Expression 28 hours label:Expression 32 hours label:Expression 36 hours label:Expression 40 hours label:Expression 44 hours Sine Phase Sine Amplitude
#object_type_xsd float string string float string string int float float float float float float float float float float float float float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
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ATTED:At1g74340.html 76 | 88 HeptamerElement:TTTGACT | HeptamerElement:ACTTCCT TTTGACT | ACTTCCT 0.06 | 0.06 260257_at Diurnal_Condition:lhyox_SD 6 0.921270 138.412000 237.470000 227.149000 134.687000 159.891000 112.009000 147.107000 249.752000 205.661000 124.484000 162.095000 102.081000 0.004526 27.709657
ATTED:At1g08650.html 35 | 158 HeptamerElement:CTATAAA | HeptamerElement:AATATCT CTATAAA | AATATCT 0.09 | 0.06 264783_at Diurnal_Condition:lhyox_SD 5 0.961654 5.499670 14.105400 8.520920 8.043150 6.559230 6.071070 5.277200 15.067900 9.222810 8.042760 6.314180 5.935450 0.005544 1.590392
ATTED:At3g01550.html 149 HeptamerElement:ATGTCGG ATGTCGG 0.07 259185_at Diurnal_Condition:lhyox_SD 6 0.997785 3.424410 79.886000 73.915200 6.080680 2.644000 2.455620 3.367320 83.985700 79.412100 6.188550 2.885560 2.689020 0.005723 22.121547
ATTED:At4g12910.html 91 | 92 | 158 | 159 | 160 HeptamerElement:AGTCAAC | HeptamerElement:AAGTCAA | HeptamerElement:CGTGTCA | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT AGTCAAC | AAGTCAA | CGTGTCA | ACGTGTC | CACGTGT 0.06 | 0.06 | 0.06 | 0.08 | 0.07 254791_at Diurnal_Condition:lhyox_SD 6 0.959884 7.451630 19.557000 15.919300 8.521960 7.101290 6.036570 7.319910 18.653200 14.886300 9.093480 6.949850 6.171130 0.006532 3.085722
ATTED:At1g56340.html 28 HeptamerElement:TATATAT TATATAT 0.10 256216_at Diurnal_Condition:lhyox_SD 6 0.965971 735.014000 1338.220000 1251.070000 725.477000 539.812000 423.275000 770.832000 1412.340000 1355.880000 741.829000 549.231000 424.696000 0.013141 246.854497
ATTED:At3g16840.html 31 | 32 | 33 HeptamerElement:AGGGTTT | HeptamerElement:TAGGGTT | HeptamerElement:TTAGGGT AGGGTTT | TAGGGTT | TTAGGGT 0.10 | 0.09 | 0.07 257648_at Diurnal_Condition:lhyox_SD 6 0.950240 31.395900 46.632500 50.231100 31.457900 25.259800 28.721800 33.926900 42.790900 50.638400 30.210000 27.545000 27.722800 0.013510 5.848847
ATTED:At2g03550.html 20 | 21 HeptamerElement:CTTATCT | HeptamerElement:TCTTATC CTTATCT | TCTTATC 0.08 | 0.08 265699_at Diurnal_Condition:lhyox_SD 5 0.915562 92.364700 272.971000 194.793000 148.230000 82.799800 125.815000 95.004700 266.854000 204.232000 157.077000 86.524600 134.853000 0.016172 36.723963
ATTED:At5g48330.html 27 | 40 HeptamerElement:AAATATC | HeptamerElement:AAAACCC AAATATC | AAAACCC 0.10 | 0.09 248693_at Diurnal_Condition:lhyox_SD 6 0.895584 6.320310 10.052600 11.920800 5.927860 7.749340 8.298850 6.503400 9.719530 11.370600 5.710260 7.239940 7.742390 0.017618 0.868417
ATTED:At1g74070.html 48 | 60 | 61 | 66 | 67 | 68 | 79 HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:TTGGGCT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:TATGGGC | HeptamerElement:AGGGTTT TGGGCTT | TGGGCTT | TTGGGCT | TGGGCTT | ATGGGCT | TATGGGC | AGGGTTT 0.06 | 0.08 | 0.07 | 0.08 | 0.07 | 0.06 | 0.06 260388_at Diurnal_Condition:lhyox_SD 6 0.980406 33.444100 249.674000 207.331000 63.601600 21.019300 25.874100 35.260600 260.186000 210.063000 58.820800 21.465900 24.842700 0.017815 60.193173
ATTED:At5g03080.html 75 | 76 | 77 | 78 HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:TACACGT ACGTGTC | CACGTGT | ACACGTG | TACACGT 0.11 | 0.10 | 0.10 | 0.07 250978_at Diurnal_Condition:lhyox_SD 6 0.968323 114.382000 265.891000 227.537000 134.981000 106.644000 105.136000 121.656000 263.856000 220.729000 136.796000 116.192000 103.234000 0.017999 39.462834
ATTED:At3g25740.html 40 | 41 | 42 | 62 | 84 HeptamerElement:GCCCATT | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:ATTGGGC | HeptamerElement:ATTGGGC GCCCATT | GGCCCAT | AGGCCCA | ATTGGGC | ATTGGGC 0.08 | 0.08 | 0.09 | 0.08 | 0.08 257646_at Diurnal_Condition:lhyox_SD 7 0.866362 8.592280 8.416300 11.926800 8.362150 5.873870 8.042670 8.082990 8.868260 12.178300 7.560670 5.558320 8.581810 0.020402 0.962239
ATTED:At3g05500.html 29 | 30 | 40 | 41 | 51 | 52 | 68 | 69 | 115 HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:ACACGTG | HeptamerElement:TACACGT | HeptamerElement:CGCGTAA | HeptamerElement:ACGCGTA | HeptamerElement:ACGCGCT ATATAAA | TATATAA | AAACCCT | AAAACCC | ACACGTG | TACACGT | CGCGTAA | ACGCGTA | ACGCGCT 0.08 | 0.11 | 0.14 | 0.09 | 0.09 | 0.07 | 0.06 | 0.10 | 0.08 259105_at Diurnal_Condition:lhyox_SD 5 0.940362 499.370000 839.226000 666.832000 638.102000 503.627000 503.364000 534.740000 884.029000 634.641000 581.327000 519.582000 457.908000 0.022881 75.074708
ATTED:At1g16040.html 79 | 80 | 100 | 122 | 133 | 180 HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TAGGCCC | HeptamerElement:AAGCCCA | HeptamerElement:TGGGCCT | HeptamerElement:CACCGAC AGGCCCA | AAGGCCC | TAGGCCC | AAGCCCA | TGGGCCT | CACCGAC 0.11 | 0.08 | 0.07 | 0.07 | 0.08 | 0.06 261839_at Diurnal_Condition:lhyox_SD 6 0.954715 9.105690 12.395900 14.468100 8.606030 10.057200 9.617840 9.430010 13.525900 13.538400 9.218570 9.359410 10.308900 0.023039 1.052597
ATTED:At1g31650.html 53 HeptamerElement:TCTCTCT TCTCTCT 0.06 246576_at Diurnal_Condition:lhyox_SD 5 0.961751 16.472200 60.102800 37.737600 21.163500 24.869800 13.284900 17.271100 57.877300 40.331800 22.627000 23.308800 13.601500 0.026902 8.731521
ATTED:At5g52780.html 7 | 14 | 43 HeptamerElement:ATAAATA | HeptamerElement:AGATAAG | HeptamerElement:CCCTAAA ATAAATA | AGATAAG | CCCTAAA 0.09 | 0.07 | 0.08 248329_at Diurnal_Condition:lhyox_SD 6 0.963678 353.208000 863.057000 855.561000 401.707000 179.080000 251.811000 339.506000 869.153000 827.331000 415.443000 172.484000 265.938000 0.028906 183.731756
ATTED:At5g10130.html 25 | 26 | 62 | 133 HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:TATATAA | HeptamerElement:GCCGACA AAACCCT | AAAACCC | TATATAA | GCCGACA 0.14 | 0.09 | 0.10 | 0.06 250469_at Diurnal_Condition:lhyox_SD 5 0.962182 5.739620 54.487500 34.682500 13.006000 12.465200 7.042050 6.187010 52.945500 35.631400 13.735500 11.672100 7.627450 0.031402 10.027477
ATTED:At3g14890.html 28 | 29 | 30 | 72 | 85 | 86 | 203 HeptamerElement:CCCTAAT | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:ACCGACA | HeptamerElement:CCGACAT | HeptamerElement:ACCGACA | HeptamerElement:ACGTGTC CCCTAAT | ACCCTAA | AACCCTA | ACCGACA | CCGACAT | ACCGACA | ACGTGTC 0.06 | 0.10 | 0.13 | 0.06 | 0.07 | 0.07 | 0.07 257237_at Diurnal_Condition:lhyox_SD 5 0.957600 9.094090 34.873700 23.874800 14.969000 10.707500 13.049100 8.294160 32.683500 23.225300 14.625100 11.541500 12.183400 0.031880 4.848165
ATTED:At2g30110.html 9 | 99 | 109 | 137 HeptamerElement:CTCTCTT | HeptamerElement:ACGCGGA | HeptamerElement:CGTCACA | HeptamerElement:GACGCGT CTCTCTT | ACGCGGA | CGTCACA | GACGCGT 0.06 | 0.07 | 0.06 | 0.06 267301_at Diurnal_Condition:lhyox_SD 5 0.950677 564.836000 868.389000 686.172000 657.878000 542.011000 548.787000 551.232000 841.372000 713.655000 615.371000 565.893000 549.915000 0.033287 65.169587
ATTED:At2g04030.html 21 | 22 | 23 | 35 | 54 | 63 | 64 | 65 HeptamerElement:GGGTTTT | HeptamerElement:AGGGTTT | HeptamerElement:TAGGGTT | HeptamerElement:TTAAACC | HeptamerElement:CTCTCTT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG GGGTTTT | AGGGTTT | TAGGGTT | TTAAACC | CTCTCTT | TCTAGAA | TTCTAGA | CTTCTAG 0.08 | 0.09 | 0.09 | 0.08 | 0.07 | 0.12 | 0.09 | 0.08 263483_at Diurnal_Condition:lhyox_SD 5 0.967875 51.518100 2784.080000 1446.350000 725.525000 211.794000 67.484000 54.922000 2994.750000 1415.840000 751.400000 225.545000 71.532900 0.033539 582.039435
ATTED:At3g52950.html 42 | 43 | 48 HeptamerElement:ACGCGGA | HeptamerElement:CACGCGG | HeptamerElement:CCACACA ACGCGGA | CACGCGG | CCACACA 0.07 | 0.07 | 0.06 252016_at Diurnal_Condition:lhyox_SD 6 0.968060 120.361000 252.757000 248.677000 113.933000 93.243100 71.502200 119.115000 249.602000 226.017000 115.071000 102.342000 65.371800 0.034561 46.521462
ATTED:At3g06140.html 30 | 162 HeptamerElement:CTTCTAG | HeptamerElement:AAAAGTC CTTCTAG | AAAAGTC 0.07 | 0.07 256400_at Diurnal_Condition:lhyox_SD 5 0.923702 6.654470 14.340400 11.674000 9.039900 7.739360 8.770210 7.067200 15.003900 10.718200 9.918410 7.224300 9.407750 0.036394 1.342031
ATTED:At3g25620.html 147 HeptamerElement:ACCGTGT ACCGTGT 0.07 256757_at Diurnal_Condition:lhyox_SD 5 0.942427 5.114990 8.559040 6.379990 5.590080 4.759950 4.936270 4.702490 7.980510 6.295980 6.075100 4.992640 4.476830 0.037591 0.725319
ATTED:At4g03950.html 67 HeptamerElement:TCTTATC TCTTATC 0.06 255359_at Diurnal_Condition:lhyox_SD 19 0.754068 3.172790 3.203570 2.872770 3.154260 3.250020 3.049740 3.225540 3.001360 2.848940 3.195550 3.415190 3.019760 0.042163 0.058321
ATTED:At3g23820.html 36 | 41 | 118 HeptamerElement:AATATCT | HeptamerElement:TATATAA | HeptamerElement:CCGACAT AATATCT | TATATAA | CCGACAT 0.12 | 0.10 | 0.06 256865_at Diurnal_Condition:lhyox_SD 6 0.936421 1124.540000 2175.640000 1801.110000 1252.270000 968.059000 683.425000 1145.450000 2285.590000 1913.050000 1163.120000 950.610000 683.584000 0.043020 352.906950
ATTED:At3g53170.html 51 HeptamerElement:ATATCTT ATATCTT 0.06 251972_at Diurnal_Condition:lhyox_SD 6 0.960885 6.109300 10.903300 10.025400 7.426790 6.028320 6.647590 6.515810 11.802800 10.634700 7.241580 5.762820 6.811060 0.045404 1.307532
ATTED:At1g14700.html 144 | 145 HeptamerElement:AATATCT | HeptamerElement:AAATATC AATATCT | AAATATC 0.08 | 0.09 262830_at Diurnal_Condition:lhyox_SD 6 0.944042 94.629300 554.522000 378.933000 184.025000 59.075700 66.923400 88.017000 506.625000 383.608000 173.548000 59.897400 70.666000 0.045917 113.105713
ATTED:At2g30070.html 19 | 47 | 68 HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT TCTCTCT | TCTCTCT | TCTCTCT 0.06 | 0.07 | 0.06 267305_at Diurnal_Condition:lhyox_SD 5 0.939634 30.546800 131.672000 94.526300 52.317900 19.992000 18.630900 27.791100 144.805000 87.848300 54.156500 21.635200 16.987000 0.047269 27.542186
ATTED:At1g16750.html 21 | 22 | 37 HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:CATGCAT CTCTCTT | TCTCTCT | CATGCAT 0.07 | 0.06 | 0.06 255766_at Diurnal_Condition:lhyox_SD 5 0.968851 8.656280 37.156400 24.362200 13.708800 13.970400 10.117100 8.624740 37.802800 25.477400 14.036200 13.072000 11.014600 0.049473 5.530375
ATTED:At3g59140.html 127 | 128 HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 0.09 | 0.09 251503_at Diurnal_Condition:lhyox_SD 6 0.978905 5.076680 11.081300 9.447120 5.607050 4.515500 4.127290 4.980330 10.351300 10.033800 5.144000 4.714810 3.987950 0.051599 1.701027
ATTED:At1g18900.html 33 HeptamerElement:ATATAAA ATATAAA 0.08 259461_at Diurnal_Condition:lhyox_SD 6 0.993427 22.125300 76.249500 78.712800 23.338600 15.575300 13.776300 21.072100 81.150300 76.608700 22.613100 16.091800 14.818100 0.056802 18.221731
ATTED:At1g68720.html 110 | 111 | 112 | 130 HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGCCCA GCCCAAT | GGCCCAA | AGGCCCA | AAGCCCA 0.06 | 0.07 | 0.09 | 0.06 262274_at Diurnal_Condition:lhyox_SD 6 0.895774 56.142400 55.488300 60.179200 55.731000 41.598900 48.022400 60.262800 52.029600 60.847500 58.600700 45.588700 47.340200 0.056900 3.319728
ATTED:At4g27520.html 26 | 104 HeptamerElement:TCTCTCT | HeptamerElement:AATATCT TCTCTCT | AATATCT 0.06 | 0.11 253875_at Diurnal_Condition:lhyox_SD 6 0.959583 137.450000 2503.730000 1854.140000 515.903000 240.179000 191.829000 141.132000 2549.710000 1671.390000 567.290000 257.252000 185.983000 0.057515 556.031640
ATTED:At3g07810.html 39 | 40 | 41 | 42 | 43 | 44 | 48 | 49 HeptamerElement:TAAATAC | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT TAAATAC | ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | ATAAATA | TATAAAT 0.06 | 0.08 | 0.10 | 0.08 | 0.10 | 0.10 | 0.07 | 0.10 258644_at Diurnal_Condition:lhyox_SD 20 0.732838 94.193400 122.748000 89.111300 110.078000 122.920000 128.300000 99.305100 119.203000 84.696300 119.765000 128.669000 125.462000 0.058397 6.466530
ATTED:At5g18690.html 13 HeptamerElement:TTAAACC TTAAACC 0.07 250002_at Diurnal_Condition:lhyox_SD 5 0.955409 9.974550 59.909700 40.091900 17.941100 14.227300 12.246300 10.221500 56.721600 41.671000 18.818000 15.552100 11.528200 0.064895 10.454457
ATTED:At4g20090.html 11 | 12 | 13 | 25 | 150 HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:AGGGTTT | HeptamerElement:AATATCT AACCCTA | AAACCCT | TAAACCC | AGGGTTT | AATATCT 0.12 | 0.13 | 0.10 | 0.10 | 0.07 254498_at Diurnal_Condition:lhyox_SD 6 0.634324 4.433690 3.792710 3.925580 4.482750 3.800850 3.818570 4.172120 3.803330 3.926850 4.167570 3.428400 3.736540 0.064914 0.047935
ATTED:At1g21660.html 53 HeptamerElement:TCTCTCT TCTCTCT 0.06 262493_at Diurnal_Condition:lhyox_SD 6 0.982101 104.988000 144.077000 142.711000 98.144700 100.792000 91.060000 95.669500 143.697000 139.568000 105.524000 94.681600 99.439000 0.065908 13.286836
ATTED:At4g36530.html 38 HeptamerElement:TTAAACC TTAAACC 0.08 246199_at Diurnal_Condition:lhyox_SD 5 0.964175 120.409000 613.498000 421.709000 246.192000 164.554000 160.283000 118.902000 625.040000 382.513000 225.950000 166.197000 160.050000 0.066175 100.450638
ATTED:At3g27060.html 154 HeptamerElement:ACGCGTC ACGCGTC 0.07 257809_at Diurnal_Condition:lhyox_SD 6 0.953079 170.639000 724.549000 558.063000 282.473000 169.321000 181.612000 185.451000 755.372000 551.251000 287.370000 178.451000 165.972000 0.066468 136.699640
ATTED:At5g35180.html 167 HeptamerElement:TGTCGAC TGTCGAC 0.08 246660_at Diurnal_Condition:lhyox_SD 5 0.941081 372.141000 721.438000 534.196000 437.433000 357.008000 305.560000 384.209000 749.337000 556.704000 453.976000 378.896000 282.772000 0.067385 89.318366
ATTED:At4g30890.html 161 HeptamerElement:ACACGTG ACACGTG 0.08 253552_at Diurnal_Condition:lhyox_SD 6 0.920976 160.837000 197.968000 193.383000 147.717000 161.638000 155.964000 151.677000 188.949000 200.515000 156.108000 175.218000 166.775000 0.067670 8.749673
ATTED:At5g55120.html 131 | 142 HeptamerElement:TTGACTT | HeptamerElement:AAGTCAA TTGACTT | AAGTCAA 0.06 | 0.07 248091_at Diurnal_Condition:lhyox_SD 6 0.970192 23.492300 103.545000 85.261400 35.005600 21.958400 19.316400 22.659400 101.474000 77.153400 33.836000 23.249800 19.898100 0.068326 20.427835
ATTED:At5g40380.html 57 HeptamerElement:AGATAAG AGATAAG 0.07 249410_at Diurnal_Condition:lhyox_SD 6 0.973910 8.301520 27.311300 35.038200 6.216900 4.541370 5.493210 8.965850 24.946200 32.123400 6.101970 4.603370 5.560530 0.068852 7.161795
ATTED:At1g75780.html 43 | 45 | 199 | 200 HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA TCTCTCT | TCTCTCT | AAGTCAA | AAAGTCA 0.06 | 0.07 | 0.06 | 0.07 262978_at Diurnal_Condition:lhyox_SD 4 0.879360 272.912000 482.625000 309.871000 319.626000 376.078000 287.239000 295.366000 508.449000 303.303000 335.323000 391.965000 267.432000 0.069034 20.321285
ATTED:At2g27880.html 53 | 55 HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT TCTCTCT | TCTCTCT 0.06 | 0.07 264066_at Diurnal_Condition:lhyox_SD 6 0.776414 3.284650 3.624690 3.492070 3.594490 3.141590 3.080210 3.518090 3.508290 3.240050 3.475860 3.144820 3.302860 0.069530 0.086301
ATTED:At1g66130.html 95 | 96 HeptamerElement:CACGTGG | HeptamerElement:CCACGTG CACGTGG | CCACGTG 0.08 | 0.07 256514_at Diurnal_Condition:lhyox_SD 6 0.951621 32.612700 111.841000 138.644000 42.089000 33.893200 63.805800 31.849500 114.216000 125.439000 39.752200 30.766500 63.787600 0.072915 21.502053
ATTED:At5g58380.html 194 HeptamerElement:AAATATC AAATATC 0.07 247820_at Diurnal_Condition:lhyox_SD 7 0.939667 37.130100 55.796100 73.005800 32.454000 24.067300 27.584100 37.247200 56.943600 72.186600 32.534300 24.557000 29.660900 0.073287 10.976208
ATTED:At1g77580.html 54 | 55 | 64 HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:CATGCTC CTCTCTT | TCTCTCT | CATGCTC 0.07 | 0.07 | 0.07 259760_at Diurnal_Condition:lhyox_SD 6 0.953537 9.851960 34.491300 26.664000 12.875900 12.605800 8.486680 9.447020 37.388800 27.630000 11.838400 13.695000 8.222050 0.075210 6.003050
ATTED:At1g29050.html 127 HeptamerElement:CGTGGCA CGTGGCA 0.08 260840_at Diurnal_Condition:lhyox_SD 6 0.991306 18.225900 77.194100 87.474500 16.537800 9.497250 14.265400 16.528300 74.983100 87.394400 16.890500 9.188070 14.910300 0.075423 20.152376
ATTED:At2g18950.html 66 | 67 | 68 | 100 HeptamerElement:ATATCTA | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:AAGTCAA ATATCTA | AATATCT | AAATATC | AAGTCAA 0.07 | 0.12 | 0.13 | 0.07 266938_at Diurnal_Condition:lhyox_SD 5 0.903763 8.334270 11.584500 9.492990 8.504900 9.064590 7.520610 8.478230 10.603700 9.366860 8.848180 8.460130 7.457000 0.077387 0.616861
ATTED:At4g00440.html 61 | 62 | 65 HeptamerElement:GCCCATT | HeptamerElement:GGCCCAT | HeptamerElement:ATGGGCC GCCCATT | GGCCCAT | ATGGGCC 0.09 | 0.10 | 0.08 255664_at Diurnal_Condition:lhyox_SD 6 0.962677 12.276400 34.399000 26.710700 16.050100 14.063400 14.066300 12.575700 32.543700 27.556300 15.755600 14.729700 13.680700 0.077658 4.668091
ATTED:At1g75900.html 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | 33 | 55 | 59 | 60 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:GTCTATA | HeptamerElement:ATAAATA | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | TATATAT | CTATATA | TCTATAT | GTCTATA | ATAAATA | ATAAATA | TATAAAT 0.08 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.13 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 262682_at Diurnal_Condition:lhyox_SD 7 0.960448 50.650400 66.816200 138.904000 18.681700 36.494400 36.471300 54.500400 60.507600 128.607000 18.985700 39.879600 36.011400 0.081678 17.756000
ATTED:At3g23090.html 53 HeptamerElement:CACCGAC CACCGAC 0.06 257761_at Diurnal_Condition:lhyox_SD 6 0.991312 31.863100 80.694000 87.594500 33.847000 27.776300 31.590200 29.349900 85.653500 80.132100 36.485900 25.420500 33.165400 0.082233 15.600855
ATTED:At5g15800.html 9 | 10 | 11 | 94 HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:ACACGTG ACCCTAA | AACCCTA | AAACCCT | ACACGTG 0.09 | 0.12 | 0.13 | 0.10 246531_at Diurnal_Condition:lhyox_SD 4 0.773968 3.682730 3.400750 3.923610 3.102840 3.314390 2.775620 3.591920 3.515220 3.959270 3.099530 3.518440 2.789650 0.082578 0.173300
ATTED:At5g05390.html 77 | 103 HeptamerElement:AAACCCT | HeptamerElement:GATATTT AAACCCT | GATATTT 0.08 | 0.09 250770_at Diurnal_Condition:lhyox_SD 5 0.907673 3.096120 4.670190 3.454670 3.225690 3.342430 2.832850 3.145870 4.260360 3.603190 3.468590 3.577760 2.995430 0.084253 0.233879
ATTED:At1g51680.html 35 | 36 HeptamerElement:TCTATAT | HeptamerElement:GTCTATA TCTATAT | GTCTATA 0.10 | 0.06 256186_at Diurnal_Condition:lhyox_SD 5 0.940466 378.897000 1982.780000 1330.090000 743.806000 266.985000 244.366000 378.687000 1965.790000 1207.390000 794.610000 279.762000 231.048000 0.089549 394.430610
ATTED:At5g50100.html 47 | 97 | 98 HeptamerElement:CCACACA | HeptamerElement:CCACGTG | HeptamerElement:GCCACGT CCACACA | CCACGTG | GCCACGT 0.06 | 0.07 | 0.07 248537_at Diurnal_Condition:lhyox_SD 6 0.948642 8.684180 32.145400 26.244000 13.421900 6.058640 6.813970 9.000220 33.871100 25.108400 13.943700 6.658290 6.815770 0.091698 6.570857
ATTED:At5g50310.html 44 | 45 | 46 | 78 | 79 | 80 | 187 HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AAATATC TGGGCCT | ATGGGCC | AATGGGC | TGGGCCT | ATGGGCC | AATGGGC | AAATATC 0.07 | 0.08 | 0.07 | 0.09 | 0.08 | 0.08 | 0.07 248549_at Diurnal_Condition:lhyox_SD 6 0.954711 98.503000 160.533000 159.425000 97.145900 111.175000 100.747000 90.571400 173.674000 155.795000 88.525900 120.920000 95.768500 0.097725 15.941275
ATTED:At2g24120.html 56 | 57 | 66 | 133 HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:TATAAAT | HeptamerElement:GATATTT TCTAGAA | TTCTAGA | TATAAAT | GATATTT 0.13 | 0.09 | 0.09 | 0.08 265991_at Diurnal_Condition:lhyox_SD 5 0.955275 5.740000 45.404400 29.942300 12.721900 8.149800 4.179270 5.271960 43.933600 28.501100 12.893200 7.580430 4.184480 0.101216 8.929505
ATTED:At2g28680.html 21 | 35 | 36 | 48 | 49 | 50 | 109 | 115 HeptamerElement:GATATTT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:AAGTCAA | HeptamerElement:TTATCCA GATATTT | CTCTCTT | TCTCTCT | ATAAATA | TATAAAT | CTATAAA | AAGTCAA | TTATCCA 0.09 | 0.07 | 0.07 | 0.07 | 0.10 | 0.09 | 0.07 | 0.07 257442_at Diurnal_Condition:lhyox_SD 7 0.751646 4.118300 4.616090 3.991120 4.463750 4.222110 3.738100 4.286060 4.428610 4.123200 4.129560 3.813440 3.664640 0.102927 0.124228
ATTED:At1g26520.html 46 | 47 HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT GCCCATA | GGCCCAT 0.07 | 0.09 261002_at Diurnal_Condition:lhyox_SD 6 0.929113 5.585580 8.815260 8.312860 6.118040 7.242340 6.232600 5.910710 9.099230 8.439920 5.510900 6.600690 6.321880 0.104547 0.597042
ATTED:At3g14740.html 135 HeptamerElement:AGGCCCA AGGCCCA 0.07 258089_at Diurnal_Condition:lhyox_SD 5 0.923663 11.008800 17.712800 14.706500 11.808300 9.847480 8.442400 10.257000 19.317000 15.647800 11.956400 10.655700 8.967530 0.105899 2.127703
ATTED:At2g20340.html 31 | 32 | 33 | 34 | 96 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:AAAATAT ATAAATA | TATAAAT | CTATAAA | CCTATAA | AAAATAT 0.08 | 0.10 | 0.09 | 0.07 | 0.07 265305_at Diurnal_Condition:lhyox_SD 6 0.998218 7.132440 83.600000 78.877200 11.367000 6.997430 6.846810 6.924280 78.433800 78.561700 11.484300 7.497620 6.410910 0.107558 21.061422
ATTED:At1g74720.html 62 HeptamerElement:TCTCTCT TCTCTCT 0.06 262209_at Diurnal_Condition:lhyox_SD 6 0.978220 33.674800 96.099100 78.090800 36.666400 35.211900 27.495400 33.296300 92.830600 84.544900 40.255000 36.008200 26.149300 0.108748 16.367339
ATTED:At5g66420.html 92 | 109 HeptamerElement:ACCGACA | HeptamerElement:TATTGGG ACCGACA | TATTGGG 0.06 | 0.06 247077_at Diurnal_Condition:lhyox_SD 6 0.986325 19.567800 180.662000 143.429000 38.681300 21.502400 17.925000 19.200900 174.728000 156.753000 38.676100 20.288600 16.415100 0.111940 41.835508
ATTED:At5g02270.html 96 | 97 HeptamerElement:CCACGTG | HeptamerElement:GCCACGT CCACGTG | GCCACGT 0.07 | 0.07 251020_at Diurnal_Condition:lhyox_SD 6 0.997876 36.896000 446.494000 466.256000 58.786600 20.623500 21.902400 38.022000 455.246000 449.690000 55.155600 20.315900 20.453300 0.115467 125.226094
ATTED:At1g78320.html 9 | 32 | 33 | 34 HeptamerElement:CTCTCTT | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA CTCTCTT | CTATATA | TCTATAT | CTCTATA 0.06 | 0.13 | 0.10 | 0.10 260805_at Diurnal_Condition:lhyox_SD 5 0.948318 5.218220 14.290000 7.911790 7.759740 5.922650 5.619410 4.815040 12.867600 8.479390 7.774980 6.397990 5.901700 0.115901 1.422887
ATTED:At5g02760.html 23 | 24 | 25 | 26 | 27 | 28 HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:CTATATA TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | CTATATA 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.13 251017_at Diurnal_Condition:lhyox_SD 18 0.994014 1035.660000 165.008000 135.362000 1044.150000 1051.430000 916.290000 940.092000 173.481000 145.442000 944.107000 1033.080000 959.836000 0.115934 241.251773
ATTED:At3g57070.html 161 HeptamerElement:AAATATC AAATATC 0.08 251663_at Diurnal_Condition:lhyox_SD 6 0.970661 68.109300 166.737000 147.484000 81.015800 54.790500 57.486000 67.131100 175.059000 156.869000 87.462700 55.063800 59.158200 0.116855 30.299844
ATTED:At2g41120.html 36 | 91 | 92 | 130 | 131 HeptamerElement:CCATGCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC CCATGCA | GCCCAAT | GGCCCAA | TGGGCCT | ATGGGCC 0.07 | 0.07 | 0.08 | 0.08 | 0.06 267063_at Diurnal_Condition:lhyox_SD 6 0.995757 8.938680 63.650000 74.616100 9.204920 5.677350 7.435020 8.936830 67.669500 70.806000 9.895940 5.316870 6.755360 0.117061 18.163091
ATTED:At1g30520.html 150 | 151 HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC TGGGCCT | TTGGGCC 0.06 | 0.06 261801_at Diurnal_Condition:lhyox_SD 6 0.995442 53.110700 143.223000 156.339000 54.606800 50.023000 55.485900 53.348800 141.153000 143.868000 59.003600 53.800500 58.661800 0.119118 26.470798
ATTED:At5g19530.html 31 | 32 | 33 HeptamerElement:CTATAAA | HeptamerElement:TCTATAA | HeptamerElement:TTCTATA CTATAAA | TCTATAA | TTCTATA 0.09 | 0.07 | 0.06 245947_at Diurnal_Condition:lhyox_SD 18 0.976075 396.775000 19.709600 64.504600 353.512000 596.837000 483.757000 370.926000 20.402700 64.343600 348.420000 569.301000 529.984000 0.120150 145.197367
ATTED:At1g76500.html 43 | 44 | 45 | 53 | 111 | 112 | 165 HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AATATCT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:TGTCGGC TATATAT | ATATATA | TATATAT | AATATCT | TTGACTT | TTTGACT | TGTCGGC 0.10 | 0.10 | 0.10 | 0.12 | 0.07 | 0.07 | 0.06 259966_at Diurnal_Condition:lhyox_SD 20 0.876176 14.696400 13.507700 14.990800 19.696500 14.974600 24.626700 14.366700 14.392900 14.679700 18.419900 14.138300 23.294900 0.120947 1.405354
ATTED:At1g20830.html 110 HeptamerElement:ACGCGCT ACGCGCT 0.09 256089_at Diurnal_Condition:lhyox_SD 6 0.963793 16.131000 42.128000 36.939700 20.959700 14.581500 15.436500 16.355500 45.066500 36.939800 22.410400 14.494700 16.531700 0.122542 7.222731
ATTED:At5g59540.html 32 | 141 HeptamerElement:ATATATA | HeptamerElement:AGATATT ATATATA | AGATATT 0.10 | 0.09 247679_at Diurnal_Condition:lhyox_SD 7 0.946621 672.591000 1175.030000 1027.560000 827.138000 543.281000 622.842000 668.214000 1177.880000 1045.160000 794.053000 516.401000 596.276000 0.124402 155.016316
ATTED:At4g38420.html 28 HeptamerElement:TAAATAC TAAATAC 0.06 252989_at Diurnal_Condition:lhyox_SD 6 0.987469 32.267100 54.620500 63.365200 28.551300 11.755000 8.923870 30.977500 58.918700 63.807800 31.100300 11.682900 9.620060 0.125814 14.349913
ATTED:At3g16170.html 74 HeptamerElement:TTTGACT TTTGACT 0.07 258312_at Diurnal_Condition:lhyox_SD 7 0.917394 25.431000 48.315300 40.882600 33.392900 19.354400 25.138800 23.646000 52.563800 44.543400 31.167300 20.890900 25.141700 0.126087 6.916043
ATTED:At4g18890.html 136 HeptamerElement:CACGTGT CACGTGT 0.09 254610_at Diurnal_Condition:lhyox_SD 5 0.880463 16.647200 15.971700 19.031100 14.119000 13.070900 10.497500 16.064900 15.261000 18.734600 13.651500 13.318700 11.353400 0.126220 1.498891
ATTED:At2g21330.html 26 | 27 | 28 | 29 | 30 | 57 | 96 | 97 | 98 | 99 | 115 HeptamerElement:TATATAT | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA | HeptamerElement:TCTCTAT | HeptamerElement:TTATCCA | HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC | HeptamerElement:CACGTGG | HeptamerElement:CCACGTG | HeptamerElement:AAAATAT TATATAT | CTATATA | TCTATAT | CTCTATA | TCTCTAT | TTATCCA | CGTGGCA | ACGTGGC | CACGTGG | CCACGTG | AAAATAT 0.10 | 0.13 | 0.10 | 0.10 | 0.06 | 0.10 | 0.07 | 0.08 | 0.08 | 0.07 | 0.07 263761_at Diurnal_Condition:lhyox_SD 6 0.949455 1093.750000 4788.500000 3610.840000 1884.720000 1089.220000 1150.160000 1048.960000 5184.480000 3827.200000 1954.430000 1159.900000 1213.880000 0.127989 924.124718
* Row count is limited to 100.