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Developmental Coexpression (AtGenExpress + ATTED-II promoter motif) normalized

Normalized Expression Data of AtGenExpress plant developmental tissues, combined with CEG coexpression analysis regulatory (7mer) motif calculations (ATTED-II).

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101


Descriptions for each data table:
AtGenExpress_ATTED_Flowering_normalize
This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_ATTED_Fruit_Seeds_normalize
This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_ATTED_Leaf_normalize
This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_ATTED_Root_normalize
This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_ATTED_Seedling_normalize
This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_ATTED_Stem_normalize
This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_ATTED_Whole_Plant_normalize
This collection of Gene Expression Properties are associated with whole plant body parts.
22

value

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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/licenses/by/3.0/deed.ja
#file_name AtGenExpress_ATTED_Fruit_Seeds_normalize
#download_from http://linkdata.org/work/rdf1s585i
#namespace ATTED http://atted.jp/data/locus/
#namespace HeptamerElement http://linkdata.org/work/rdf1s328i/Heptamer_elements.html#
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif sequence motif position CEG Origin of baseline sequence label:Col-0_sil3 label:Col-0_sil4 label:Col-0_sil5 label:Col-0_seed6 label:Col-0_seed7 label:Col-0_seed8 label:Col-0_seed9 label:Col-0_seed10
#object_type_xsd string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
ATTED:At1g01030.html - - - - TAIR9 -0.9939 -1.2313 -1.0662 -0.8448 -0.8884 -0.9800 -0.6120 -0.5423
ATTED:At1g01050.html HeptamerElement:ATATAAA ATATAAA 65 0.08 PPDB 0.2243 -0.2936 -0.3575 -0.3505 -0.4447 -1.2415 -1.1868 -1.4913
ATTED:At1g01060.html HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG ACGTGTC | CACGTGT | CCACGTG 168 | 169 | 170 0.09 | 0.10 | 0.07 PPDB -0.4806 -1.6269 -1.8579 0.1687 -0.0330 -0.7066 -0.0449 -0.8595
ATTED:At1g01070.html HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT ATAAATA | TATAAAT | AAAATAT | AAAATAT 113 | 114 | 183 | 524 0.08 | 0.10 | 0.07 | 0.07 PPDB -2.1281 -2.8113 -1.2108 -0.3310 0.3386 -0.5519 -0.4718 -0.6322
ATTED:At1g01080.html HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC ATGGGCC | AATGGGC 287 | 288 0.08 | 0.09 PPDB -0.3498 -1.5535 -1.6695 -2.0785 -2.6145 -3.5744 -3.9964 -3.8221
ATTED:At1g01090.html HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAA | ATATATA | TATATAT | ATATATA 43 | 44 | 45 | 46 0.11 | 0.10 | 0.10 | 0.10 PPDB -0.6602 0.5857 0.9187 1.0004 0.6967 -0.4711 -1.1750 -1.6676
ATTED:At1g01100.html HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 PPDB -0.0637 -0.2261 -0.1528 0.0710 0.0048 -0.4309 -0.6299 -0.6643
ATTED:At1g01110.html - - - - PPDB -1.0936 -1.5663 -1.4555 -1.1174 -1.2955 -1.2510 -1.2012 -1.1086
ATTED:At1g01130.html HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT AAGCCCA | AAAGCCC | GCCCAAT 36 | 37 | 86 0.07 | 0.06 | 0.07 PPDB -0.4094 -0.5578 -0.4560 -0.1215 -0.5150 -0.9616 -1.1274 -0.9689
ATTED:At1g01140.html HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA ACGTGGC | ACGCGGA 78 | 113 0.07 | 0.07 PPDB 1.1729 0.9327 1.1014 0.0696 -0.5777 -3.5669 -4.6614 -4.6999
ATTED:At1g01150.html HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC AAACCCT | AAACCCT | TAAACCC 382 | 407 | 408 0.14 | 0.14 | 0.10 TAIR9 -0.1898 -0.0969 -0.1474 0.0040 0.0489 -0.0829 0.2248 0.2604
ATTED:At1g01160.html HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT 166 | 193 | 194 | 212 0.07 | 0.07 | 0.07 | 0.06 PPDB -0.3645 -0.3885 -0.3658 0.0323 0.1468 0.3011 0.4040 0.3933
ATTED:At1g01170.html HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT GATAAGA | AGATAAG | TTATCCA | GCCCATT 18 | 19 | 38 | 64 0.06 | 0.06 | 0.09 | 0.10 PPDB -0.4084 -1.1897 -0.8599 -0.6637 -0.4210 1.1696 1.3386 1.3279
ATTED:At1g01200.html HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA ATATAAA | ATATAAA | ATATAAA 38 | 298 | 322 0.08 | 0.08 | 0.08 TAIR9 -0.2113 -0.9439 -1.0601 -0.6342 -0.7772 -0.4695 -0.1590 -0.2258
ATTED:At1g01220.html HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT CTCCAGA | TGACTTT | TTGACTT | TTTGACT 43 | 108 | 109 | 110 0.06 | 0.06 | 0.07 | 0.07 TAIR9 -0.6208 -0.7354 -0.8136 -1.3796 -1.7502 -2.3588 -2.2803 -2.5664
ATTED:At1g01225.html HeptamerElement:TCTCTAG TCTCTAG 95 0.06 TAIR9 -1.1570 -0.2645 0.5473 1.4854 1.5471 0.5386 -0.0534 -0.1877
ATTED:At1g01230.html HeptamerElement:AAATATC AAATATC 43 0.13 PPDB -0.2610 -0.1022 -0.0329 0.5515 0.7518 0.8936 1.1803 1.1402
ATTED:At1g01240.html HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG 117 | 132 | 133 | 477 | 478 | 518 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 PPDB -1.0383 -0.7564 -0.4180 0.1417 0.5576 1.2762 1.2703 1.2418
ATTED:At1g01280.html HeptamerElement:TATATAT TATATAT 39 0.10 TAIR9 -4.8724 -4.8870 -4.8157 -4.9308 -4.6919 -4.5985 -4.6051 -4.5901
ATTED:At1g01290.html HeptamerElement:AACCCTA AACCCTA 32 0.13 TAIR9 -0.1732 -0.4197 -0.1405 -0.2104 -0.6074 -0.2530 -0.8308 -0.8599
ATTED:At1g01300.html HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA GATATTT | AGATATT | TTATCCA 128 | 129 | 177 0.10 | 0.10 | 0.06 PPDB -0.2220 -1.7778 -1.3583 -0.0345 -0.1710 -0.5735 -0.8479 -0.9800
ATTED:At1g01310.html HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA 52 | 53 | 54 | 60 | 61 0.06 | 0.07 | 0.06 | 0.06 | 0.07 TAIR9 -2.8271 -5.8314 -5.8840 -6.0999 -6.1305 -5.9589 -6.0470 -5.9020
ATTED:At1g01320.html - - - - PPDB -1.4260 -1.2104 -1.4298 -2.2798 -2.7165 -3.1472 -3.4031 -3.4269
ATTED:At1g01430.html HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT CATGCAA | CCGACAT | AATATCT 150 | 191 | 223 0.08 | 0.06 | 0.07 PPDB 0.1104 -0.0337 0.0881 -0.5471 -1.2082 -1.9864 -2.2277 -2.5061
ATTED:At1g01440.html - - - - PPDB -0.6737 -0.4755 -0.2010 -0.9218 -1.1072 -0.7096 -0.8269 -0.9845
ATTED:At1g01470.html HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC 115 | 116 | 152 | 153 | 233 0.08 | 0.07 | 0.08 | 0.07 | 0.07 PPDB -0.7056 -0.0291 0.3240 -0.3210 0.3918 1.0192 1.1933 1.2261
ATTED:At1g01480.html HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA TATATAA | ATATAAA | TATATAA | CTATATA 27 | 331 | 332 | 333 0.10 | 0.08 | 0.10 | 0.13 PPDB -1.4699 -2.6073 -2.7626 -2.4846 -0.1385 1.2605 1.4558 1.3497
ATTED:At1g01490.html HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 PPDB -1.0176 -1.1462 -0.4902 0.2281 0.3098 0.4431 0.5272 0.1008
ATTED:At1g01500.html HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG AAACCCT | AATATCT | AAATATC | ACACGTG 5 | 13 | 14 | 136 0.14 | 0.11 | 0.11 | 0.08 PPDB -1.6110 -1.1180 -1.0171 -1.3130 -1.1203 -1.4677 -0.8940 -1.0119
ATTED:At1g01510.html HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC 12 | 44 | 45 | 46 | 111 0.07 | 0.08 | 0.10 | 0.13 | 0.09 PPDB -0.2744 -0.2397 -0.1392 0.1673 -0.0420 -1.3205 -1.7910 -1.9269
ATTED:At1g01520.html HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CACGTGT | ACACGTG 64 | 65 0.08 | 0.08 TAIR9 -0.8400 -0.7050 -0.9200 -0.7449 -0.7314 -0.7999 -0.4823 -0.5555
ATTED:At1g01540.html HeptamerElement:CATGCAA | HeptamerElement:CCACACA CATGCAA | CCACACA 38 | 43 0.08 | 0.07 PPDB -0.5632 -0.5273 -0.2466 -0.4566 -0.5746 -0.8667 -0.9389 -1.1527
ATTED:At1g01550.html HeptamerElement:CGTCACA CGTCACA 107 0.06 PPDB -0.4941 -0.1175 -0.1026 -0.2607 -0.0484 0.2503 0.2760 0.3506
ATTED:At1g01560.html - - - - PPDB -2.1868 -3.3078 -3.0873 -3.2168 -3.0480 -2.1083 -1.8274 -1.4310
ATTED:At1g01600.html HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA 27 | 28 | 29 | 524 | 525 | 526 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 PPDB -2.4924 -4.6924 -4.8865 -4.7662 -4.3828 -4.6096 -4.9121 -5.0342
ATTED:At1g01610.html HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC 24 | 34 | 52 | 71 | 72 0.06 | 0.06 | 0.06 | 0.09 | 0.06 PPDB 0.1674 -1.2571 -1.6987 0.1628 0.6431 -0.9304 -1.5381 -1.9830
ATTED:At1g01620.html HeptamerElement:TTATCCA TTATCCA 135 0.09 PPDB 0.0575 -0.9116 -0.4226 -0.6282 -1.3799 -3.3166 -4.3005 -5.2646
ATTED:At1g01630.html HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT 83 | 84 | 85 | 86 | 103 0.07 | 0.07 | 0.10 | 0.08 | 0.07 PPDB -1.7932 -1.7538 -1.7922 -2.3206 -2.6856 -3.2366 -3.7511 -4.1708
ATTED:At1g01650.html - - - - PPDB 0.0043 -0.6353 -0.7067 -0.4279 -0.0590 0.8912 1.2535 1.3418
ATTED:At1g01670.html HeptamerElement:ACGTGTC ACGTGTC 64 0.10 PPDB 0.4235 0.0658 -0.1595 -0.1920 -0.2073 -0.2974 -0.0764 -0.1286
ATTED:At1g01710.html HeptamerElement:ACACGTG ACACGTG 93 0.09 PPDB -0.0210 -0.0568 -0.2773 -0.5673 -0.4949 0.4111 0.6429 0.5824
ATTED:At1g01720.html HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 PPDB -2.1171 -1.8352 -2.3089 -1.3066 -0.0872 1.0266 1.5334 1.4579
ATTED:At1g01730.html HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC 96 | 97 | 98 | 99 | 110 0.07 | 0.08 | 0.11 | 0.08 | 0.08 PPDB -0.4689 -0.1312 -0.1178 -0.2897 -0.3692 0.0623 0.5514 0.6789
ATTED:At1g01740.html - - - - TAIR9 -0.3474 -0.5523 -0.5020 -0.4514 -0.6598 -0.8175 -0.7039 -0.3897
ATTED:At1g01770.html HeptamerElement:ATATATA | HeptamerElement:TATATAT ATATATA | TATATAT 57 | 58 0.09 | 0.09 PPDB -1.0314 -1.0657 -1.1228 -0.9535 -0.8977 0.1503 -0.1005 0.2227
ATTED:At1g01790.html - - - - PPDB -0.8578 -0.8955 -1.3855 -2.3508 -2.6355 -3.7455 -3.5157 -3.7505
ATTED:At1g01820.html HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 33 | 34 0.09 | 0.09 PPDB -0.9310 -0.6753 -0.5121 -0.4419 -0.3423 0.1990 0.3257 0.5350
ATTED:At1g01840.html HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 PPDB 0.0502 0.0253 -0.1038 -0.1746 -0.2321 0.5418 0.4269 0.7643
ATTED:At1g01860.html - - - - PPDB -0.5272 -0.5210 -0.5549 -0.4551 -0.5818 -0.6601 -0.6429 -0.5495
ATTED:At1g01900.html HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA 46 | 47 | 48 | 49 | 113 | 236 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 PPDB -1.8059 1.0938 1.6391 1.1322 0.8770 -1.5576 -2.0128 -2.8733
ATTED:At1g01920.html HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 PPDB -0.3423 -0.8227 -1.2348 -0.7994 -0.8259 -0.6249 -0.3085 -0.3952
ATTED:At1g01930.html HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 PPDB -0.2383 -0.2135 -0.3368 -0.5880 -0.5123 0.0760 -0.1558 0.0404
ATTED:At1g01940.html HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT 111 | 112 | 113 | 114 | 122 | 123 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 PPDB -0.5534 -0.3534 -0.4448 -0.7055 -0.4863 -1.0374 -1.1230 -1.3054
ATTED:At1g01950.html HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT AAAATAT | CTCTCTT 20 | 169 0.07 | 0.06 PPDB -0.6188 -0.0287 0.0998 0.0258 -0.0220 -0.4816 -0.7399 -0.9026
ATTED:At1g01970.html HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 PPDB -0.2041 -0.2158 -0.3949 -0.5458 -0.4102 0.4665 0.6467 0.4800
ATTED:At1g01990.html HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT 37 | 61 | 62 | 63 | 74 | 123 | 124 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 PPDB -0.3348 -0.0315 0.0471 0.2381 0.2919 0.7993 0.9394 1.0372
ATTED:At1g02020.html HeptamerElement:TGCCGAC TGCCGAC 118 0.08 PPDB -0.3367 0.1494 0.2683 0.3088 0.2017 0.4461 0.7758 0.7333
ATTED:At1g02050.html - - - - TAIR9 -4.3856 -4.3450 -4.0724 -4.0507 -4.2338 -3.4824 -3.2547 -3.2990
ATTED:At1g02060.html HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 PPDB -0.7867 -0.4513 -0.3667 -0.3778 -0.1184 -0.3575 -0.1180 -0.1518
ATTED:At1g02070.html HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 TAIR9 -2.8249 -3.0293 -3.3156 -3.0926 -2.9505 -2.8738 -2.9411 -2.8870
ATTED:At1g02080.html HeptamerElement:AACCCTA AACCCTA 436 0.10 PPDB -0.4400 -0.0480 -0.2194 -0.1624 -0.1178 0.0881 0.1200 0.1320
ATTED:At1g02090.html HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 PPDB -0.4310 -0.1271 -0.2717 -0.2994 -0.3289 -0.2806 -0.1250 -0.0725
ATTED:At1g02100.html HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG 138 | 139 | 158 | 159 | 160 0.07 | 0.08 | 0.10 | 0.10 | 0.08 PPDB -0.8164 -0.8076 -0.8485 -0.8725 -0.8494 -0.5647 -0.6496 -0.6012
ATTED:At1g02120.html HeptamerElement:GGCCCAA GGCCCAA 176 0.07 TAIR9 -0.3407 -0.3665 -0.7301 -1.0183 -0.7365 -0.4534 -0.3156 -0.3765
ATTED:At1g02130.html HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 PPDB -0.0564 -0.0410 0.0310 -0.1809 -0.3732 -0.5153 -0.4284 -0.4739
ATTED:At1g02140.html HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 PPDB -0.1838 -0.1403 -0.0155 0.2485 0.3041 0.1175 0.0221 0.2435
ATTED:At1g02160.html HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 PPDB -0.0474 -0.4908 -0.3349 0.1403 0.2798 1.3212 0.9001 1.2009
ATTED:At1g02180.html HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA 69 | 70 | 71 | 72 | 88 0.07 | 0.07 | 0.09 | 0.06 | 0.07 PPDB 0.0104 -0.6542 -0.6736 -0.2031 -0.5002 -0.9421 -1.1717 -0.9732
ATTED:At1g02190.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA TATATAA | CTATATA | TCTATAT | CTCTATA 28 | 29 | 30 | 31 0.11 | 0.13 | 0.10 | 0.10 PPDB -0.9164 -4.5834 -4.4734 -4.6256 -4.5127 -4.4755 -4.6366 -4.2480
ATTED:At1g02205.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA 34 | 35 | 46 | 47 | 70 0.11 | 0.13 | 0.07 | 0.08 | 0.06 PPDB 0.3284 -0.9138 -1.9241 -5.8244 -5.7033 -5.2981 -5.1343 -4.8805
ATTED:At1g02260.html HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC CGTGGCA | ACGTGGC 46 | 47 0.08 | 0.09 PPDB 0.0252 -0.5095 -0.5476 -0.1170 -0.0509 -0.3361 -0.6960 -0.5009
ATTED:At1g02270.html HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 126 | 127 0.09 | 0.09 PPDB -0.6490 0.0644 0.0436 -0.6049 -0.0649 -0.3103 -0.4283 -0.5018
ATTED:At1g02280.html HeptamerElement:GATAAGG GATAAGG 15 0.07 PPDB -0.2189 -0.7131 -0.7532 -0.6779 -0.9467 -0.7772 -0.7670 -0.5531
ATTED:At1g02310.html HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA 25 | 34 | 35 | 36 | 131 | 541 | 542 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 PPDB -2.0092 -2.2364 -1.2851 0.1556 0.7077 1.6241 0.8725 1.3077
ATTED:At1g02330.html HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT 90 | 105 | 106 | 107 | 179 | 180 | 199 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 PPDB -0.2266 -0.2926 -0.1728 -0.2094 -0.0490 -0.2409 -0.1899 -0.5004
ATTED:At1g02340.html HeptamerElement:CCACACA CCACACA 114 0.06 PPDB -0.8735 -1.7404 -1.5400 -1.7491 -1.3158 -2.2829 -1.3785 -1.9148
ATTED:At1g02360.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT 30 | 31 | 32 | 52 | 53 | 416 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 PPDB -4.5536 -4.7056 -4.6444 -4.2836 -4.0750 -3.8808 -3.8610 -3.8007
ATTED:At1g02370.html HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC AACCCTA | AAACCCT | TAAACCC | TTAAACC 31 | 32 | 33 | 34 0.11 | 0.12 | 0.08 | 0.06 PPDB -0.9656 -0.9757 -1.0459 -0.7584 -0.5577 -1.2074 -1.0871 -0.8729
ATTED:At1g02390.html HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC 28 | 71 | 122 | 172 | 173 | 180 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 PPDB 0.0307 -0.3504 0.1367 0.7139 -0.4185 -0.9061 -1.5717 -0.6869
ATTED:At1g02400.html HeptamerElement:AATAATT | HeptamerElement:AATAATT AATAATT | AATAATT 236 | 332 0.06 | 0.06 PPDB -2.4030 -1.0055 -2.0414 -2.4481 -2.2158 -0.9287 -0.0701 -0.2758
ATTED:At1g02410.html HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 PPDB -0.2144 -0.0819 0.0367 -0.0330 -0.1104 -0.1749 -0.4776 -0.4291
ATTED:At1g02450.html HeptamerElement:AAATATC | HeptamerElement:AAATATC AAATATC | AAATATC 165 | 187 0.07 | 0.07 PPDB 0.4332 -2.4460 -2.7890 -2.4130 -2.4115 -1.8549 -1.7242 -1.9922
ATTED:At1g02460.html HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT 47 | 48 | 49 | 50 | 68 | 126 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 TAIR9 -0.0176 -0.2884 -0.5549 -0.0621 -0.1067 0.1414 0.3566 0.3001
ATTED:At1g02470.html HeptamerElement:AAAGTCA AAAGTCA 164 0.07 TAIR9 -3.2049 -4.4110 -4.2449 -3.7644 -3.5989 -3.2477 -2.8659 -3.1398
ATTED:At1g02475.html - - - - PPDB -0.3476 -0.6166 -0.8681 -1.8566 -1.9113 -2.0384 -2.1892 -2.0152
* Row count is limited to 100.