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Developmental Coexpression (AtGenExpress + ATTED-II promoter motif) normalized

Normalized Expression Data of AtGenExpress plant developmental tissues, combined with CEG coexpression analysis regulatory (7mer) motif calculations (ATTED-II).

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101


Descriptions for each data table:
AtGenExpress_ATTED_Flowering_normalize
This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_ATTED_Fruit_Seeds_normalize
This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_ATTED_Leaf_normalize
This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_ATTED_Root_normalize
This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_ATTED_Seedling_normalize
This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_ATTED_Stem_normalize
This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_ATTED_Whole_Plant_normalize
This collection of Gene Expression Properties are associated with whole plant body parts.
22

value

useful
0
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/licenses/by/3.0/deed.ja
#file_name AtGenExpress_ATTED_Seedling_normalize
#download_from http://linkdata.org/work/rdf1s585i
#namespace ATTED http://atted.jp/data/locus/
#namespace HeptamerElement http://linkdata.org/work/rdf1s328i/Heptamer_elements.html#
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif sequence motif position CEG Origin of baseline sequence label:Col-0_cotyl label:Col-0_hyp label:Col-0_root7 label:Col-0_veg_leaf label:Col-0_leaf_1-2 label:Col-0_shoot_veg label:Col-0_seedl_green label:Col-0_roset7 label:Col-0_seedl_GM label:Col-0_seedl_GM5 label:Col-0_sedlGM-21 label:Col-0_sedlGM5-21
#object_type_xsd string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
ATTED:At1g01030.html - - - - TAIR9 -0.1212 -1.2324 -0.7520 -0.1656 -0.1655 -0.7326 0.3016 0.4737 -0.1111 -0.4093 -0.7257 -0.5813
ATTED:At1g01050.html HeptamerElement:ATATAAA ATATAAA 65 0.08 PPDB 0.0505 0.3934 0.3881 -0.2570 -0.0375 -0.1242 -0.2876 -0.3728 -0.4967 -0.3055 -0.4622 -0.5177
ATTED:At1g01060.html HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG ACGTGTC | CACGTGT | CCACGTG 168 | 169 | 170 0.09 | 0.10 | 0.07 PPDB 0.0353 -0.1653 -2.3772 -0.3683 -0.2525 -0.7005 -0.1545 -2.0230 -0.2842 -0.4797 -1.0922 -0.7794
ATTED:At1g01070.html HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT ATAAATA | TATAAAT | AAAATAT | AAAATAT 113 | 114 | 183 | 524 0.08 | 0.10 | 0.07 | 0.07 PPDB -0.5834 1.1120 -0.4220 -0.9336 -3.2898 0.7159 -1.5614 -3.3971 -2.5750 -1.5069 -1.8744 -1.2577
ATTED:At1g01080.html HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC ATGGGCC | AATGGGC 287 | 288 0.08 | 0.09 PPDB 0.1113 -1.3319 -3.1827 0.1705 0.5716 -0.4056 0.6422 0.2538 -0.3730 -0.1750 -0.7080 -0.8901
ATTED:At1g01090.html HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAA | ATATATA | TATATAT | ATATATA 43 | 44 | 45 | 46 0.11 | 0.10 | 0.10 | 0.10 PPDB -0.7351 -0.3281 -0.3539 -0.1988 -0.1469 -0.2272 -0.1524 -0.2348 -0.2203 -0.4675 -0.7129 -0.6169
ATTED:At1g01100.html HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 PPDB -1.3998 0.0768 0.3310 0.2847 -0.4281 0.4353 -0.5433 -0.2548 -0.6574 -0.5609 -0.7399 -0.6566
ATTED:At1g01110.html - - - - PPDB -1.8297 -1.0930 -0.1462 -1.2397 -1.6159 -0.7769 -1.0872 -1.5034 -1.4954 -1.4079 -1.2193 -1.1475
ATTED:At1g01130.html HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT AAGCCCA | AAAGCCC | GCCCAAT 36 | 37 | 86 0.07 | 0.06 | 0.07 PPDB -1.0332 -0.9831 -1.2421 -0.7516 -0.8123 -0.8290 -1.3427 -1.0189 -1.1204 -0.9573 -0.1104 -0.4577
ATTED:At1g01140.html HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA ACGTGGC | ACGCGGA 78 | 113 0.07 | 0.07 PPDB 0.2370 -2.5201 -5.8218 -1.5553 -0.3241 -2.8314 -1.3960 -1.0492 -0.1767 -0.2628 -0.0393 0.5565
ATTED:At1g01150.html HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC AAACCCT | AAACCCT | TAAACCC 382 | 407 | 408 0.14 | 0.14 | 0.10 TAIR9 -0.0175 -0.1043 -0.0849 -0.0409 -0.0911 0.0323 -0.0076 0.0135 -0.1429 -0.1486 -0.1440 -0.0913
ATTED:At1g01160.html HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT 166 | 193 | 194 | 212 0.07 | 0.07 | 0.07 | 0.06 PPDB -0.9779 -0.5885 -0.1320 -0.0462 -0.9503 0.4351 -0.8283 -0.7904 -0.7613 -0.7775 -0.6033 -0.6030
ATTED:At1g01170.html HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT GATAAGA | AGATAAG | TTATCCA | GCCCATT 18 | 19 | 38 | 64 0.06 | 0.06 | 0.09 | 0.10 PPDB -0.3567 -0.5068 -4.2241 -0.6126 -0.4275 -0.7389 -1.0109 -0.5431 -0.1350 -0.1788 -0.0512 0.0119
ATTED:At1g01200.html HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA ATATAAA | ATATAAA | ATATAAA 38 | 298 | 322 0.08 | 0.08 | 0.08 TAIR9 -0.2977 0.6833 0.9668 -0.1271 -0.1668 0.1413 -0.1743 -0.3466 -0.7328 -0.4997 -0.5383 -0.3645
ATTED:At1g01220.html HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT CTCCAGA | TGACTTT | TTGACTT | TTTGACT 43 | 108 | 109 | 110 0.06 | 0.06 | 0.07 | 0.07 TAIR9 -0.0177 0.0339 -0.2877 -0.0216 0.3634 -0.1216 0.9255 0.2158 -0.4836 -0.2004 -0.7032 -0.5246
ATTED:At1g01225.html HeptamerElement:TCTCTAG TCTCTAG 95 0.06 TAIR9 -2.1291 -0.8320 -0.7531 -1.3042 -1.6598 -1.2324 -1.6400 -1.5035 -1.9536 -1.9223 -2.1797 -2.3347
ATTED:At1g01230.html HeptamerElement:AAATATC AAATATC 43 0.13 PPDB -0.2430 -0.3244 0.0402 -0.8619 -0.6254 -0.9977 -1.4228 -0.7000 -0.2349 -0.4530 -0.4991 -0.6244
ATTED:At1g01240.html HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG 117 | 132 | 133 | 477 | 478 | 518 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 PPDB -0.9025 -1.4463 -1.5247 -2.1092 -1.2581 -2.3278 -2.5519 -1.2970 -1.0916 -1.1783 -0.9580 -0.7261
ATTED:At1g01280.html HeptamerElement:TATATAT TATATAT 39 0.10 TAIR9 -4.8907 -4.9652 -5.0274 -4.9535 -4.8469 -4.9696 -4.7443 -4.8212 -4.8754 -4.9106 -4.7553 -4.8173
ATTED:At1g01290.html HeptamerElement:AACCCTA AACCCTA 32 0.13 TAIR9 -0.3179 0.0034 0.0592 -0.3045 -0.4369 0.0140 -0.3587 -0.3871 -0.4526 -0.3830 -0.7003 -0.3942
ATTED:At1g01300.html HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA GATATTT | AGATATT | TTATCCA 128 | 129 | 177 0.10 | 0.10 | 0.06 PPDB -1.9192 0.1612 -0.5961 -0.6176 -1.8785 -0.0611 -1.0642 -1.0587 -1.6856 -1.3699 -1.7058 -1.6645
ATTED:At1g01310.html HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA 52 | 53 | 54 | 60 | 61 0.06 | 0.07 | 0.06 | 0.06 | 0.07 TAIR9 -6.0613 -6.2581 -6.2200 -6.3551 -6.1576 -6.2016 -6.2892 -6.3279 -6.3673 -6.1916 -6.2738 -6.0965
ATTED:At1g01320.html - - - - PPDB -0.2235 -1.6748 -4.6757 0.4009 0.2669 0.0072 1.3980 0.0106 -0.5067 -0.3046 -0.4747 -0.4114
ATTED:At1g01430.html HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT CATGCAA | CCGACAT | AATATCT 150 | 191 | 223 0.08 | 0.06 | 0.07 PPDB 0.5670 0.3730 -0.5672 -0.5462 0.1168 -0.8015 0.2308 0.5366 0.3450 0.7667 0.3505 0.0817
ATTED:At1g01440.html - - - - PPDB -0.0670 -0.6147 -0.1224 -0.3421 -0.2716 -0.4279 0.0233 -0.1948 0.3440 -0.0985 0.2643 -0.1194
ATTED:At1g01470.html HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC 115 | 116 | 152 | 153 | 233 0.08 | 0.07 | 0.08 | 0.07 | 0.07 PPDB 0.3573 -0.7971 -0.3225 -1.9327 -1.6123 -2.4207 -2.3513 -0.6180 -0.9784 -1.0417 -1.0252 -0.7067
ATTED:At1g01480.html HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA TATATAA | ATATAAA | TATATAA | CTATATA 27 | 331 | 332 | 333 0.10 | 0.08 | 0.10 | 0.13 PPDB -2.9173 -2.8951 -1.7073 -3.0212 -2.6349 -2.9361 -3.0901 -3.0547 -2.7607 -2.9473 -2.7447 -2.7363
ATTED:At1g01490.html HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 PPDB -0.1370 0.0468 -1.2434 -1.0854 -0.6061 -0.9698 -1.0445 -0.8842 0.2862 0.2763 0.3817 0.3356
ATTED:At1g01500.html HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG AAACCCT | AATATCT | AAATATC | ACACGTG 5 | 13 | 14 | 136 0.14 | 0.11 | 0.11 | 0.08 PPDB -1.6124 -2.2992 -2.3602 -2.0727 -1.5267 -2.3141 -1.8779 -1.0196 -1.4501 -1.6824 -1.7544 -1.7743
ATTED:At1g01510.html HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC 12 | 44 | 45 | 46 | 111 0.07 | 0.08 | 0.10 | 0.13 | 0.09 PPDB -1.0591 0.0617 0.2258 0.0471 -0.4475 0.2511 -0.4211 -0.5303 -0.5326 -0.5951 -0.4311 -0.4156
ATTED:At1g01520.html HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CACGTGT | ACACGTG 64 | 65 0.08 | 0.08 TAIR9 -0.4288 -0.8360 -1.0098 -0.8137 -0.2350 -0.8581 -0.2784 -0.3905 -0.4939 -0.2638 -0.6524 -0.3482
ATTED:At1g01540.html HeptamerElement:CATGCAA | HeptamerElement:CCACACA CATGCAA | CCACACA 38 | 43 0.08 | 0.07 PPDB 0.1567 -0.5369 -0.4178 -0.2395 0.4129 -0.5036 -0.0361 -0.2173 0.1678 -0.2298 0.4878 -0.1097
ATTED:At1g01550.html HeptamerElement:CGTCACA CGTCACA 107 0.06 PPDB -0.2646 -0.3863 0.0706 -0.5840 -0.5443 -0.7083 -0.9158 -0.8083 0.2523 -0.1473 0.2532 0.2379
ATTED:At1g01560.html - - - - PPDB -0.4434 -2.3805 -2.7079 -3.1097 -2.4725 -3.4653 -2.9694 -3.0251 -0.5974 -1.6116 -1.2585 -0.2925
ATTED:At1g01600.html HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA 27 | 28 | 29 | 524 | 525 | 526 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 PPDB -5.3492 -5.2856 -4.6662 -2.3142 -5.9609 -3.6446 -3.7461 -3.1471 -4.8051 -4.1527 -4.1365 -3.3138
ATTED:At1g01610.html HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC 24 | 34 | 52 | 71 | 72 0.06 | 0.06 | 0.06 | 0.09 | 0.06 PPDB -1.3867 -0.7914 -1.5386 -0.6469 -1.0381 -0.7582 -0.7654 -0.4204 -0.5433 -0.3928 -0.8671 -1.1918
ATTED:At1g01620.html HeptamerElement:TTATCCA TTATCCA 135 0.09 PPDB -0.5867 0.4837 0.7209 -0.2544 -0.4311 -0.1930 -0.9953 -0.2693 -0.0113 -0.2674 0.4847 0.3130
ATTED:At1g01630.html HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT 83 | 84 | 85 | 86 | 103 0.07 | 0.07 | 0.10 | 0.08 | 0.07 PPDB -0.5180 -1.4083 -1.1217 -0.9191 -1.0255 -1.2199 -1.1293 -0.8309 -1.3228 -0.8418 -1.4657 -1.6223
ATTED:At1g01650.html - - - - PPDB -0.9059 -1.5590 -0.3738 -0.7908 -1.0856 -0.9455 -1.0712 -1.0875 -0.6641 -0.7865 -0.6215 -0.3328
ATTED:At1g01670.html HeptamerElement:ACGTGTC ACGTGTC 64 0.10 PPDB -0.1213 -0.1451 0.1728 -0.1896 0.0199 -0.0810 -0.3035 -0.3119 -0.3881 -0.2629 0.0335 -0.1722
ATTED:At1g01710.html HeptamerElement:ACACGTG ACACGTG 93 0.09 PPDB -0.1173 -0.0288 -0.5797 -0.2811 -0.0625 -0.2711 -0.1992 -0.1205 -0.3485 -0.3443 -0.3002 -0.3857
ATTED:At1g01720.html HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 PPDB -2.7591 -2.5072 -1.8860 -2.9195 -2.6544 -3.3400 -3.1862 -2.5419 -1.2895 -1.5544 -1.6360 -0.8949
ATTED:At1g01730.html HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC 96 | 97 | 98 | 99 | 110 0.07 | 0.08 | 0.11 | 0.08 | 0.08 PPDB -0.8918 -0.0904 -0.1965 -0.5543 -1.8735 -0.3612 -1.2715 -1.0539 -0.5156 -0.7948 -0.6002 -0.4538
ATTED:At1g01740.html - - - - TAIR9 0.1739 0.3991 -0.0154 0.1778 0.1046 0.2253 0.3526 0.1594 -0.2685 -0.0651 -0.0111 0.0632
ATTED:At1g01770.html HeptamerElement:ATATATA | HeptamerElement:TATATAT ATATATA | TATATAT 57 | 58 0.09 | 0.09 PPDB -0.6743 -1.0792 -1.9484 -1.0147 -0.4671 -1.3391 -0.5486 -0.9501 -0.9372 -0.8819 -0.7034 -0.5657
ATTED:At1g01790.html - - - - PPDB 0.3619 -0.8647 -1.9727 -0.4223 0.5110 -0.9959 1.1724 0.5978 -0.0344 -0.0095 -0.1788 -0.1453
ATTED:At1g01820.html HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 33 | 34 0.09 | 0.09 PPDB -0.2815 -0.1765 -0.1830 -0.4435 -0.5374 -0.3929 -0.7454 -0.4593 0.0254 -0.1119 0.3618 0.2157
ATTED:At1g01840.html HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 PPDB -0.6677 -0.5681 -0.6977 0.0181 -0.0722 0.1380 -0.0301 0.3516 -0.7309 -0.7648 -0.6752 -0.5993
ATTED:At1g01860.html - - - - PPDB 0.1937 -0.7253 -0.7135 0.4616 0.5677 0.1552 0.5284 0.4342 -0.4270 -0.3048 -0.3942 -0.3523
ATTED:At1g01900.html HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA 46 | 47 | 48 | 49 | 113 | 236 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 PPDB -3.8774 -1.4296 -2.9637 -2.0902 -2.3059 -2.5682 -1.6900 -2.2320 -3.3736 -3.0603 -2.7626 -2.2651
ATTED:At1g01920.html HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 PPDB -0.7941 -0.1758 0.2725 -0.0373 -0.5466 0.3249 -0.5177 -0.5951 -0.4183 -0.5323 -0.3765 -0.4599
ATTED:At1g01930.html HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 PPDB -0.3773 -0.4805 -0.2794 0.0173 0.0155 0.0197 0.3162 -0.2499 -0.0223 -0.2158 -0.1121 -0.1547
ATTED:At1g01940.html HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT 111 | 112 | 113 | 114 | 122 | 123 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 PPDB -1.3156 0.1919 0.4455 0.1833 -1.3668 0.6644 -0.9400 -0.5937 -0.7458 -0.4564 -0.6182 -0.8981
ATTED:At1g01950.html HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT AAAATAT | CTCTCTT 20 | 169 0.07 | 0.06 PPDB -0.3730 -0.1275 0.0195 0.0505 -0.2002 0.2359 0.1154 -0.5808 0.0343 -0.2986 0.1039 -0.1006
ATTED:At1g01970.html HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 PPDB -0.2802 -1.1954 -2.1648 0.0728 0.3396 -0.4061 1.1495 0.4350 -0.3702 -0.4560 -0.9552 -0.7423
ATTED:At1g01990.html HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT 37 | 61 | 62 | 63 | 74 | 123 | 124 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 PPDB -0.0382 -0.3592 -0.6991 -0.2431 -0.3047 -0.0304 -0.2901 -0.0024 0.3559 -0.1138 0.3191 0.0523
ATTED:At1g02020.html HeptamerElement:TGCCGAC TGCCGAC 118 0.08 PPDB -0.0131 -0.7737 -1.1442 -0.5339 0.2100 -0.5828 0.1728 -0.0725 -0.1783 -0.2400 -0.0257 -0.0796
ATTED:At1g02050.html - - - - TAIR9 -4.1903 -4.0194 -3.8572 -4.0271 -3.8416 -3.8923 -4.0125 -4.1661 -3.7119 -4.1049 -3.2943 -3.4123
ATTED:At1g02060.html HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 PPDB -0.4160 -0.1795 -0.1869 0.0703 -0.3509 0.2237 0.2829 -0.4620 -0.0672 -0.2298 0.1241 -0.1144
ATTED:At1g02070.html HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 TAIR9 -3.5086 -3.6479 -3.4303 -3.3060 -3.1000 -3.3287 -3.2883 -2.9630 -3.3436 -2.9767 -3.0009 -3.0480
ATTED:At1g02080.html HeptamerElement:AACCCTA AACCCTA 436 0.10 PPDB -0.5168 -0.0991 0.0165 -0.3146 -0.7716 -0.1920 0.0672 -0.4278 -0.6470 -0.6772 -0.5146 -0.5179
ATTED:At1g02090.html HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 PPDB -0.7719 -0.4661 0.0548 0.1059 -0.6856 0.4479 -0.5366 -0.3777 -0.7150 -0.9149 -1.0045 -0.8834
ATTED:At1g02100.html HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG 138 | 139 | 158 | 159 | 160 0.07 | 0.08 | 0.10 | 0.10 | 0.08 PPDB -0.2072 -0.1518 0.3481 -0.2198 -0.4288 -0.1675 -0.5156 -0.4958 0.1800 -0.1907 0.4075 0.2943
ATTED:At1g02120.html HeptamerElement:GGCCCAA GGCCCAA 176 0.07 TAIR9 -0.0520 0.1856 -0.3144 -0.6011 -0.6606 -0.4386 -0.1775 -0.4084 -0.0079 -0.1832 0.0734 0.2952
ATTED:At1g02130.html HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 PPDB -0.1549 -0.2519 0.2582 -0.1013 0.0355 0.0812 -0.3724 -0.0292 -0.1907 -0.3674 -0.2847 -0.2262
ATTED:At1g02140.html HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 PPDB -0.5337 -0.2478 0.1871 -0.0187 -0.3388 0.2828 -0.5047 -0.2109 -0.3103 -0.2124 -0.2062 -0.2747
ATTED:At1g02160.html HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 PPDB -0.7701 -0.5305 -0.5338 -0.6561 -0.9382 -0.4802 -1.5813 -0.8253 -0.7622 -0.7527 -0.2572 -0.5451
ATTED:At1g02180.html HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA 69 | 70 | 71 | 72 | 88 0.07 | 0.07 | 0.09 | 0.06 | 0.07 PPDB -1.4007 -0.5906 -1.0825 0.0289 -0.6950 0.1865 -0.7641 -0.5013 -1.4505 -1.1368 -1.3808 -1.3372
ATTED:At1g02190.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA TATATAA | CTATATA | TCTATAT | CTCTATA 28 | 29 | 30 | 31 0.11 | 0.13 | 0.10 | 0.10 PPDB -4.5210 -4.7846 -4.7606 -4.1563 -4.4457 -3.9329 -4.5408 -4.2316 -4.4451 -4.4582 -3.9631 -3.3410
ATTED:At1g02205.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA 34 | 35 | 46 | 47 | 70 0.11 | 0.13 | 0.07 | 0.08 | 0.06 PPDB -5.2029 -6.2732 -6.4641 -1.2733 -2.5108 -1.9631 -2.2767 -1.9346 -4.2455 -3.5064 -2.3226 -1.0972
ATTED:At1g02260.html HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC CGTGGCA | ACGTGGC 46 | 47 0.08 | 0.09 PPDB -0.2559 -0.7491 -0.1602 -0.5069 -0.6326 -0.3396 -0.5065 -0.6127 -0.6472 -0.5352 -0.3796 -0.4102
ATTED:At1g02270.html HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 126 | 127 0.09 | 0.09 PPDB 0.5021 -0.5163 0.0332 -0.4108 0.1210 -0.5965 -0.4237 0.0564 0.2393 -0.1529 0.1986 0.0191
ATTED:At1g02280.html HeptamerElement:GATAAGG GATAAGG 15 0.07 PPDB -0.7399 -1.1201 -1.9077 0.8860 0.6354 0.6741 0.4103 0.1655 -0.2935 -0.3921 -0.5216 -0.7297
ATTED:At1g02310.html HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA 25 | 34 | 35 | 36 | 131 | 541 | 542 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 PPDB -3.2034 -3.6604 -2.1188 -3.3486 -3.0549 -3.4898 -3.5037 -3.4158 -3.4955 -2.9322 -3.3129 -2.1782
ATTED:At1g02330.html HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT 90 | 105 | 106 | 107 | 179 | 180 | 199 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 PPDB -1.0089 -0.2468 0.1536 0.0883 -0.8571 0.2803 -0.4629 -0.7027 -0.4922 -0.6458 -0.7781 -0.7875
ATTED:At1g02340.html HeptamerElement:CCACACA CCACACA 114 0.06 PPDB -3.2891 -2.9176 -3.5324 -3.2401 -3.2963 -3.1085 -3.4191 -2.5297 -2.8813 -2.3788 -0.8479 -0.9291
ATTED:At1g02360.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT 30 | 31 | 32 | 52 | 53 | 416 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 PPDB -2.3903 -3.5326 -0.9153 -4.0723 -2.9805 -4.4541 -4.2915 -3.8914 0.2232 -1.8034 -2.5575 -3.7589
ATTED:At1g02370.html HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC AACCCTA | AAACCCT | TAAACCC | TTAAACC 31 | 32 | 33 | 34 0.11 | 0.12 | 0.08 | 0.06 PPDB -1.5526 -0.8732 -0.2694 -0.0970 -1.2875 0.4711 -0.4329 -0.6732 -1.4743 -1.2536 -1.2056 -1.6050
ATTED:At1g02390.html HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC 28 | 71 | 122 | 172 | 173 | 180 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 PPDB -0.2911 -2.7207 -2.2189 -2.2590 -1.6785 -2.5832 -2.3853 -1.6861 -1.9218 -1.6114 -1.1040 -0.6630
ATTED:At1g02400.html HeptamerElement:AATAATT | HeptamerElement:AATAATT AATAATT | AATAATT 236 | 332 0.06 | 0.06 PPDB -1.5080 -1.9065 0.5133 -1.8558 -1.8405 -1.4608 -2.8592 -1.9281 1.7419 -0.4930 0.2499 -0.1665
ATTED:At1g02410.html HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 PPDB -0.1759 -0.2773 -0.4454 -0.1282 -0.1176 0.0135 -0.2650 -0.1949 -0.1303 -0.3556 -0.3765 -0.5038
ATTED:At1g02450.html HeptamerElement:AAATATC | HeptamerElement:AAATATC AAATATC | AAATATC 165 | 187 0.07 | 0.07 PPDB -2.0375 -0.8212 -1.5709 -2.3037 -2.2571 -1.9960 -2.5031 -2.8012 -2.3701 -1.8421 -1.8987 -1.4944
ATTED:At1g02460.html HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT 47 | 48 | 49 | 50 | 68 | 126 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 TAIR9 0.0443 -0.2964 0.3037 -0.1246 0.2327 -0.2326 0.0237 0.3534 -0.1933 -0.0383 -0.0836 -0.0735
ATTED:At1g02470.html HeptamerElement:AAAGTCA AAAGTCA 164 0.07 TAIR9 -3.9704 -3.9696 -4.3354 -3.8164 -3.8211 -4.1556 -4.2613 -3.8422 -3.9348 -3.4387 -3.2781 -2.4898
ATTED:At1g02475.html - - - - PPDB 0.6393 -1.2533 -3.5958 -0.9495 0.1994 -1.7174 -0.3245 -0.1118 0.0727 0.2124 0.0098 0.0542
* Row count is limited to 100.