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DIURNAL normalized gene expression + PLACE promoter motif

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Normalized Expression Data of DIURNAL circadian conditions, combined with PLACE (Plant Cis-acting Regulatory DNA Elements) motif database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_LL12_LDHH_normalize
#download_from http://linkdata.org/work/rdf1s747i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:LL12_LDHH_normalize_0_hours label:LL12_LDHH_normalize_4_hours label:LL12_LDHH_normalize_8_hours label:LL12_LDHH_normalize_12_hours label:LL12_LDHH_normalize_16_hours label:LL12_LDHH_normalize_20_hours label:LL12_LDHH_normalize_24_hours label:LL12_LDHH_normalize_28_hours label:LL12_LDHH_normalize_32_hours label:LL12_LDHH_normalize_36_hours label:LL12_LDHH_normalize_40_hours label:LL12_LDHH_normalize_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at LL12_LDHH 12 0.480419 0.850566 0.972980 1.005775 1.034800 1.076361 0.973441 0.896715 1.164573 0.794259 1.257467 0.837388 1.135674 6.989967 0.024014
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at LL12_LDHH 20 0.710774 1.307028 0.778172 1.087719 0.828583 1.245942 1.087433 1.045417 0.783562 0.894002 0.746773 1.342940 0.852428 13.058014 0.073925
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at LL12_LDHH 19 0.817021 0.520238 0.610905 0.621509 0.802354 1.246450 2.566710 0.843510 0.630649 0.934122 1.108833 0.725637 1.389084 23.596641 0.227204
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at LL12_LDHH 13 0.594185 0.963590 1.010860 1.128968 0.987405 0.858203 1.103792 0.766863 0.961058 1.034911 1.011151 1.169904 1.003296 6.006131 0.027050
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at LL12_LDHH 3 0.467378 0.979771 1.178647 0.956635 0.970121 0.955441 0.882384 1.023701 0.999051 0.894503 1.156051 1.039892 0.963804 0.788990 0.013812
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at LL12_LDHH 16 0.729591 0.629165 0.625731 0.954899 1.022040 1.119573 0.732153 0.777495 1.303289 0.873939 0.864345 2.308128 0.789244 3.551653 0.143768
TAIR:ATMG00710 - - - - TAIR9 244907_at LL12_LDHH 13 0.556404 0.639460 0.920006 0.993783 0.924461 1.105094 1.209371 0.916707 1.082067 1.266415 1.138123 0.715988 1.088525 7.157022 0.034668
TAIR:ATMG00720 - - - - TAIR9 244908_at LL12_LDHH 15 0.696829 0.882631 0.959811 0.962744 0.980558 0.997140 0.999740 0.829002 0.917364 0.879099 1.098533 1.446383 1.046996 9.374854 0.072006
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at LL12_LDHH 13 0.833266 0.973748 0.954015 1.115226 1.361286 1.094144 0.702807 0.977605 0.831750 0.906639 1.291114 1.040895 0.750771 6.619174 0.097936
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at LL12_LDHH 16 0.796596 1.092627 0.858195 0.874738 0.942851 1.116171 0.936788 0.950311 0.909163 1.141828 1.262084 0.974609 0.940635 4.527533 0.035369
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at LL12_LDHH 14 0.689760 0.567404 0.535262 0.615590 0.534108 1.357504 1.079176 0.520381 0.496294 1.665614 1.660291 1.319754 1.648621 9.114848 0.207403
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at LL12_LDHH 8 0.768051 0.831887 0.854316 1.103224 0.971400 1.049478 0.916189 0.963263 0.928802 1.263673 1.086423 1.035614 0.995729 5.221540 0.054558
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at LL12_LDHH 14 0.491052 0.865536 0.811113 1.426148 1.151779 1.171723 1.193457 0.953486 0.851871 0.967919 0.776929 0.878777 0.951262 4.958973 0.037044
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at LL12_LDHH 10 0.661274 0.964179 0.958499 1.164984 1.096129 1.023984 0.815834 0.841092 1.304821 0.937569 0.952523 1.066282 0.874104 9.626476 0.051985
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at LL12_LDHH 20 0.522320 1.074994 0.985776 0.944622 1.077303 0.801226 1.069699 0.907189 1.051775 0.896244 0.959362 1.074608 1.157203 15.231752 0.024420
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at LL12_LDHH 8 0.600351 0.946663 1.051654 1.200248 0.925401 1.102989 1.003079 0.909070 0.799833 1.097872 0.913565 0.925965 1.123662 6.127679 0.013145
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at LL12_LDHH 22 0.497570 0.938885 0.863027 0.917373 0.960643 1.236463 0.888645 1.135007 1.288019 0.919362 0.919109 0.867585 1.065881 17.166641 0.023604
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at LL12_LDHH 15 0.646168 0.677561 0.755379 0.798334 1.228288 0.793606 1.427496 0.653070 0.986011 1.040704 1.260348 1.578922 0.800281 8.308233 0.129542
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at LL12_LDHH 17 0.636511 0.529728 0.502690 0.757298 0.985629 0.877288 1.207721 0.950120 0.627756 1.389772 0.530745 2.754728 0.886527 2.118499 0.207885
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at LL12_LDHH 14 0.517178 0.851883 1.020400 1.212659 0.845106 0.965666 1.434872 0.838430 0.664874 1.225090 1.203053 0.876982 0.860985 5.899103 0.042305
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at LL12_LDHH 18 0.821797 0.876477 0.811321 0.731359 1.204679 0.981086 1.137303 1.080142 0.927023 0.626416 1.019676 1.239019 1.365500 12.173126 0.117524
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at LL12_LDHH 8 0.658436 0.964877 0.828401 1.857839 1.415095 1.005981 0.864395 0.671152 0.753594 0.978833 0.810162 0.961565 0.888105 4.362843 0.121314
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at LL12_LDHH 19 0.713330 0.973197 1.107893 0.983933 0.915228 0.986425 1.270364 0.808526 0.775643 0.846959 1.123803 1.022901 1.185128 0.046454 0.054159
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at LL12_LDHH 18 0.877391 0.831924 0.759572 0.590896 0.773515 1.042970 1.594837 0.683138 1.046880 0.729127 0.727489 1.724439 1.495214 12.669114 0.200155
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at LL12_LDHH 13 0.237898 1.037613 1.070352 1.227250 0.897984 1.198184 0.969818 0.868211 0.981030 0.780444 1.008122 0.906132 1.054860 10.881388 0.005270
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at LL12_LDHH 19 0.608824 0.977522 0.859216 1.024271 0.729251 1.128482 1.168448 0.916204 0.870432 1.025646 1.172726 0.955575 1.172227 0.273510 0.046680
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at LL12_LDHH 16 0.566614 0.741067 0.730248 1.094800 0.859286 1.006998 1.049224 0.930130 0.991159 0.842510 1.431385 1.045328 1.277867 2.892752 0.071575
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at LL12_LDHH 17 0.471044 0.961344 1.089050 1.001597 1.133626 1.023456 1.155510 1.016441 0.843716 0.864716 0.983478 0.921465 1.005601 12.028770 0.022153
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at LL12_LDHH 21 0.730136 0.806891 0.606537 0.761250 1.249401 0.781266 2.024926 1.206528 0.893765 0.914437 0.824370 0.795100 1.135530 22.301694 0.124774
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at LL12_LDHH 17 0.910608 0.876290 0.844592 0.848594 1.083768 1.145521 1.265088 0.964895 0.717739 0.963565 1.035558 1.168002 1.086387 10.735612 0.098480
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at LL12_LDHH 16 0.444711 0.961576 1.023518 0.987989 1.739185 1.002025 1.287485 1.030758 0.724962 0.638890 0.782023 1.007633 0.813955 9.764795 0.063695
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at LL12_LDHH 13 0.573752 1.295332 1.402184 1.156242 2.332656 0.933363 0.497478 0.577655 0.393677 0.761444 0.947652 1.058019 0.644297 6.991325 0.163219
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at LL12_LDHH 16 0.786699 0.961096 0.852409 0.998610 0.955251 1.029799 1.122743 1.073064 0.879805 1.012884 0.987783 1.072133 1.054426 11.910255 0.038649
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at LL12_LDHH 17 0.708284 0.901894 0.707836 0.919617 1.035445 1.079684 1.186734 1.222456 0.861037 1.073693 0.964128 1.091380 0.956095 11.408872 0.054906
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at LL12_LDHH 17 0.859953 0.984985 0.697706 0.870133 0.953079 1.030155 1.353423 0.928855 0.505707 0.939540 1.092805 1.462138 1.181472 11.110126 0.149391
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at LL12_LDHH 17 0.910326 1.003170 0.970705 0.788293 0.956186 1.281435 1.159179 0.829010 0.674917 0.744254 1.279141 1.259892 1.053818 10.632289 0.121452
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at LL12_LDHH 15 0.509027 1.282936 0.858221 1.032418 0.867590 0.893170 0.842273 0.666308 0.629249 1.341729 1.061796 1.230727 1.293581 8.636774 0.045123
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at LL12_LDHH 14 0.599419 0.815275 0.840469 0.843523 0.766375 0.910398 0.923660 0.805333 0.605152 1.392691 1.304994 1.433252 1.358877 8.867547 0.099906
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at LL12_LDHH 12 0.547702 1.011343 1.015580 1.160373 1.367261 0.959521 1.055899 0.758082 0.848575 0.856265 0.992264 0.868843 1.105995 6.716317 0.042374
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at LL12_LDHH 20 0.566686 0.835267 1.058729 1.191129 0.993717 0.937026 1.048484 0.928013 0.907596 0.930662 0.946909 0.987375 1.235093 2.401755 0.010696
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at LL12_LDHH 15 0.648009 0.728074 0.724717 0.931886 1.457244 1.020003 1.177703 0.814828 0.985387 1.045208 0.760148 1.316911 1.037890 3.281045 0.095602
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at LL12_LDHH 22 0.658194 0.980971 1.322793 0.792606 0.944752 1.086005 1.283571 0.970119 0.995939 0.899465 0.770451 0.997636 0.955692 16.445405 0.056900
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at LL12_LDHH 20 0.755545 0.777909 0.845500 1.144675 1.193476 0.632012 1.431441 0.897561 0.787574 0.872158 1.024000 1.035647 1.358047 0.926479 0.060014
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at LL12_LDHH 20 0.533142 1.089929 1.099411 0.960948 1.041957 0.933144 1.178460 0.901751 0.915305 0.933807 0.918840 1.003157 1.023290 15.231962 0.024886
TAIR:ATMG00150 - - - - TAIR9 244949_at LL12_LDHH 7 0.407485 0.893869 1.049998 1.226436 0.896378 1.029171 0.826214 1.100589 1.018268 0.811979 1.287644 0.929495 0.929958 2.607384 0.036445
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at LL12_LDHH 17 0.756219 0.637337 0.551518 1.190158 0.829470 1.204515 1.604305 0.555290 0.691928 0.653878 0.937842 2.298922 0.844836 10.035309 0.237501
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at LL12_LDHH 17 0.844877 0.646808 0.400931 0.382762 1.040340 1.329365 1.119532 0.737820 0.683078 0.610246 1.328151 1.428449 2.292520 11.347712 0.299736
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at LL12_LDHH 15 0.457974 0.955614 1.031677 0.920855 1.119861 0.977243 1.098786 0.961369 0.757386 1.261255 0.941635 1.000354 0.973965 5.123240 0.025114
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at LL12_LDHH 10 0.674174 0.981492 0.753745 1.238807 1.124859 0.987142 0.672132 0.791861 0.978346 1.012375 1.184554 1.035735 1.238951 5.808581 0.071048
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at LL12_LDHH 20 0.542920 0.783897 0.971819 0.878998 0.981700 0.709185 1.303322 1.151883 0.947294 1.007248 1.187187 0.992237 1.085231 13.815972 0.023103
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at LL12_LDHH 13 0.865531 0.863043 0.818099 1.109162 1.104932 1.158797 0.841465 0.956931 0.892526 0.927923 1.283613 1.157004 0.886506 6.935637 0.088106
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at LL12_LDHH 16 0.761239 1.050808 1.054312 0.996300 0.939320 1.211659 1.023026 0.899267 0.799470 0.931071 1.034538 1.174366 0.885863 9.739021 0.044679
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at LL12_LDHH 16 0.613450 1.100948 0.870696 1.134921 0.929067 1.246175 0.963249 0.913157 0.749504 0.883370 1.148437 0.959052 1.101423 9.912049 0.053341
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at LL12_LDHH 17 0.594499 0.937046 1.043957 1.138916 1.024696 1.186272 1.077437 0.931871 0.837524 0.926163 0.708148 0.995520 1.192450 12.760980 0.037189
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at LL12_LDHH 14 0.383312 0.551332 0.600723 0.566075 0.502701 1.082160 0.559273 0.842083 1.022682 1.856065 1.304407 1.560356 1.552142 7.975320 0.103406
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at LL12_LDHH 23 0.672865 1.101965 0.871752 0.932912 1.157147 1.122707 1.247180 1.280656 1.140827 0.857452 0.804785 0.774601 0.708016 17.708194 0.046865
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at LL12_LDHH 15 0.806502 0.980926 0.778044 0.940352 1.092858 0.999232 1.001642 0.769987 0.695721 1.083683 1.113449 1.367731 1.176376 9.180463 0.102166
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at LL12_LDHH 16 0.731386 0.875060 0.789877 0.887525 1.261802 1.012849 1.351840 0.878495 0.786887 1.045790 0.985019 1.099049 1.025807 9.838854 0.083736
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at LL12_LDHH 16 0.477650 1.053070 1.036207 1.005191 1.040118 1.094745 0.994572 0.921934 1.001212 0.945696 0.906244 1.017595 0.983417 12.204340 0.007373
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at LL12_LDHH 22 0.411535 1.090809 0.975689 1.016936 1.069472 1.157908 1.032225 0.934027 1.068111 0.901786 0.798552 0.993345 0.961141 21.221323 0.017596
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at LL12_LDHH 17 0.797544 0.971526 0.573841 0.891819 1.080862 1.461825 1.341250 0.901077 0.854693 0.950260 0.873556 1.158696 0.940595 10.803013 0.123790
TAIR:ATCG00600 - - - - TAIR9 244966_at LL12_LDHH 19 0.435201 1.676044 0.895087 0.628106 1.958919 1.052634 1.114362 0.994325 0.889177 0.644312 0.655738 1.012535 0.478761 23.449502 0.043872
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at LL12_LDHH 17 0.833576 1.047042 0.760343 0.929426 0.940979 1.064302 1.144430 0.960074 0.809016 1.036152 1.171015 1.041446 1.095776 10.762992 0.061739
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at LL12_LDHH 20 0.890820 0.915630 0.664023 0.773774 1.063872 1.148594 1.256506 1.241299 0.994755 0.904070 0.944356 0.992225 1.100895 12.921320 0.086330
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at LL12_LDHH 20 0.851196 1.041889 0.587656 0.788536 1.150540 1.205451 1.451468 1.339101 0.914594 0.865667 0.763926 0.948755 0.942417 13.530145 0.109068
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at LL12_LDHH 17 0.378325 1.843083 0.978040 1.004933 1.457353 0.741848 0.734968 0.611493 0.407900 0.910999 0.905009 1.436646 0.967728 2.620177 0.054030
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at LL12_LDHH 18 0.921446 0.992048 0.849880 0.866549 0.900374 1.133210 1.124061 0.891212 0.827619 0.920659 1.087861 1.225722 1.180805 11.319938 0.087927
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at LL12_LDHH 12 0.583987 1.446335 0.943998 0.997815 1.504331 0.735919 1.022530 0.768935 0.558732 0.908035 1.177961 0.938220 0.997189 7.765839 0.046162
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at LL12_LDHH 12 0.532313 1.243928 0.983198 1.187633 1.698482 0.698714 1.178260 1.126119 0.863083 0.695894 1.012012 0.658116 0.654560 11.032603 0.040267
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at LL12_LDHH 21 0.756977 1.284913 0.733315 0.888878 1.098309 0.912020 1.171923 0.930135 0.927964 0.679081 0.786845 1.037382 1.549234 14.094480 0.121888
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at LL12_LDHH 20 0.788524 1.039195 0.827752 0.937027 1.062567 1.043277 1.271607 1.052695 0.970779 0.932473 0.926370 0.940571 0.995686 13.500123 0.045550
TAIR:ATCG00720 - - - - PPDB 244976_at LL12_LDHH 20 0.780281 0.988550 0.877227 1.018971 0.984118 1.054547 1.140117 1.099056 0.968524 0.992032 0.858723 1.012793 1.005343 14.208332 0.030682
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at LL12_LDHH 13 0.324881 2.195667 1.154838 1.151187 2.613404 0.838086 0.638208 0.267144 0.257994 0.410113 0.358000 1.365929 0.749431 7.890199 0.093842
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at LL12_LDHH 17 0.731074 0.971471 0.789637 0.937078 1.093800 1.141361 1.147290 0.935517 0.797818 1.010763 1.015979 0.867330 1.291957 11.201356 0.067331
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at LL12_LDHH 15 0.848471 0.926499 0.707073 1.051614 0.921895 1.040454 1.221564 0.839661 0.609375 1.069554 1.135412 1.119290 1.357609 10.451109 0.102201
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at LL12_LDHH 15 0.784256 1.089633 0.693510 1.126805 0.838453 1.041695 1.082897 0.892812 0.599326 0.955045 1.147123 1.174485 1.358217 11.040084 0.095566
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at LL12_LDHH 16 0.471368 1.167455 0.676050 0.859771 0.890729 0.861608 0.933091 0.873209 0.878409 1.195137 0.958415 1.235031 1.471094 12.468012 0.064821
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at LL12_LDHH 14 0.622615 0.768761 0.641484 0.809777 0.732464 0.687582 0.903368 0.598187 0.365924 1.568768 1.479577 1.716753 1.727353 9.014357 0.167682
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at LL12_LDHH 18 0.753127 0.978938 0.602372 0.631399 0.692265 1.044996 1.366631 0.679691 0.541000 1.287661 1.044348 1.635768 1.494933 11.338959 0.181685
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at LL12_LDHH 20 0.709967 0.914860 0.586079 0.945509 0.789595 1.103940 1.303012 1.272154 0.890328 1.022730 1.036279 0.987578 1.147935 13.149000 0.082953
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at LL12_LDHH 19 0.819999 1.018300 0.757802 0.927140 0.820491 1.139538 1.314430 1.125811 0.838915 0.897706 1.033547 1.014814 1.111508 13.150729 0.087568
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at LL12_LDHH 18 0.642927 0.768487 0.573958 0.937596 0.682703 1.254751 1.257138 1.093162 0.986504 1.013109 1.148531 1.014332 1.269729 11.877088 0.092769
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at LL12_LDHH 19 0.539362 0.837145 0.801419 0.881756 0.723277 1.059381 1.108095 0.967086 1.031613 1.237209 1.069876 1.062822 1.220321 0.254209 0.036065
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at LL12_LDHH 22 0.596521 1.006959 0.797458 0.883756 0.932856 1.044525 1.352574 0.985285 1.050085 1.110494 1.007795 0.814573 1.013639 21.672594 0.033752
TAIR:ATCG01280 - - - - TAIR9 244989_s_at LL12_LDHH 13 0.527834 1.386453 1.421949 0.658227 2.672837 0.789083 0.585621 0.529083 0.481930 0.550514 0.728627 1.176934 1.018743 7.115084 0.114789
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at LL12_LDHH 12 0.518620 1.030812 1.379572 0.848526 2.835548 0.922102 0.999002 0.724044 0.667263 0.723095 0.545882 0.750514 0.573639 6.843933 0.122900
* Row count is limited to 100.