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DIURNAL normalized gene expression + PLACE promoter motif

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Normalized Expression Data of DIURNAL circadian conditions, combined with PLACE (Plant Cis-acting Regulatory DNA Elements) motif database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday_normalize
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_lhyox_SD_normalize
#download_from http://linkdata.org/work/rdf1s747i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:lhyox_SD_normalize_0_hours label:lhyox_SD_normalize_4_hours label:lhyox_SD_normalize_8_hours label:lhyox_SD_normalize_12_hours label:lhyox_SD_normalize_16_hours label:lhyox_SD_normalize_20_hours label:lhyox_SD_normalize_24_hours label:lhyox_SD_normalize_28_hours label:lhyox_SD_normalize_32_hours label:lhyox_SD_normalize_36_hours label:lhyox_SD_normalize_40_hours label:lhyox_SD_normalize_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at lhyox_SD 4 0.839448 0.867236 1.389693 0.881529 0.833589 1.036301 1.003392 0.864669 1.255759 0.920383 0.809005 1.124236 1.014206 16.137304 0.041468
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at lhyox_SD 12 0.813807 0.926617 0.991314 1.027413 1.111758 0.979511 0.964810 0.965876 0.951948 0.927814 1.106072 0.995203 1.051664 6.966619 0.026721
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at lhyox_SD 4 0.885674 1.081070 0.969462 1.006495 0.980240 0.794249 1.104589 1.009603 1.023104 1.105124 1.035844 0.727179 1.163041 15.659325 0.039542
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at lhyox_SD 16 0.830417 1.012490 0.833941 1.107751 0.984699 1.030383 1.049583 1.100965 0.841229 1.096336 0.947252 0.971485 1.023884 10.965362 0.014686
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at lhyox_SD 2 0.863083 1.002760 0.996247 1.031982 0.899291 0.926877 1.071743 1.089013 1.035416 1.053624 0.903182 0.975225 1.014639 19.164381 0.030967
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at lhyox_SD 19 0.830701 0.780288 1.118924 0.778201 0.832200 1.159718 1.290869 0.768596 1.094944 0.817529 0.845628 1.116347 1.396755 13.407464 0.089282
TAIR:ATMG00710 - - - - TAIR9 244907_at lhyox_SD 23 0.814384 1.177678 0.865676 0.941998 1.004184 0.838830 1.077866 1.192783 0.830477 1.006973 1.051829 0.917583 1.094123 20.119323 0.038807
TAIR:ATMG00720 - - - - TAIR9 244908_at lhyox_SD 13 0.842564 0.982278 0.921801 0.978209 1.107011 1.003887 0.924796 1.021809 0.925509 1.015035 1.153729 1.073937 0.891998 6.387334 0.038543
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at lhyox_SD 13 0.658796 0.957632 0.957333 1.092131 0.975952 0.969881 1.030484 0.883679 1.030258 1.068885 1.027806 1.041606 0.964353 7.704922 0.023788
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at lhyox_SD 12 0.645216 1.052749 0.937813 0.973927 1.077067 0.963869 0.971371 1.124230 0.925502 1.008190 1.160010 0.903090 0.902182 8.534895 0.012293
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at lhyox_SD 17 0.827000 0.701162 1.131880 0.646400 0.784242 1.543297 1.235387 0.716852 1.239693 0.622643 0.712778 1.538217 1.127448 12.275639 0.130513
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at lhyox_SD 11 0.769240 0.982630 1.009271 1.027942 1.030378 1.054420 0.890412 0.962842 0.934971 1.116178 1.028852 0.992947 0.969157 4.196146 0.028783
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at lhyox_SD 15 0.457651 1.035988 0.947782 1.001224 0.930131 0.990528 1.051357 0.965807 0.950422 1.100901 1.022852 0.956573 1.046435 13.993683 0.003710
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at lhyox_SD 1 0.813659 1.186449 1.015633 0.935912 0.967266 1.012345 0.978910 1.089500 0.997149 0.959676 0.887764 1.052830 0.916565 18.436287 0.033104
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at lhyox_SD 10 0.719138 0.933545 1.120586 0.952429 1.015487 1.036659 0.931738 0.895337 1.066766 0.938679 1.092396 1.074036 0.942341 4.797666 0.021839
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at lhyox_SD 1 0.921605 1.140601 1.074371 0.970575 0.956626 0.975466 0.897980 1.184094 1.008065 0.938852 1.007297 0.944881 0.901194 20.092017 0.037745
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at lhyox_SD 19 0.822382 1.054466 0.909028 0.986242 0.944964 1.018188 1.063116 0.973350 0.945531 0.986590 0.956349 1.075582 1.086595 12.987958 0.031062
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at lhyox_SD 15 0.726187 1.017697 1.027212 0.911335 0.990827 1.106155 0.875859 1.049872 1.003667 0.854423 1.052597 1.153990 0.956365 11.159900 0.021869
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at lhyox_SD 17 0.656779 0.643446 1.294016 0.689656 0.956124 1.319851 1.043843 0.608443 1.210564 0.742143 1.025672 1.443824 1.022418 2.334564 0.078742
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at lhyox_SD 8 0.566581 1.047733 0.996326 1.066770 0.875201 1.046788 0.919427 1.122151 1.091287 0.964969 0.906935 1.112169 0.850244 15.548746 0.022995
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at lhyox_SD 9 0.889438 1.022235 1.018316 1.010968 0.980048 1.078700 0.824381 0.932351 1.069659 1.058740 1.038622 1.081245 0.884735 3.218785 0.031301
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at lhyox_SD 20 0.829938 1.081559 0.942269 0.817745 0.961626 1.159420 1.059509 1.124611 0.853868 0.894469 0.890001 1.251316 0.963606 12.946139 0.068895
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at lhyox_SD 22 0.908350 1.146367 0.882550 0.983348 0.809313 0.927562 1.148772 1.256509 0.872777 0.949991 0.793554 0.992725 1.236532 16.031922 0.090357
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at lhyox_SD 20 0.791282 0.974483 0.987020 1.033446 0.929601 0.939494 1.197194 1.004669 1.048998 0.999196 0.895463 0.889384 1.101050 17.507455 0.032811
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at lhyox_SD 12 0.870601 0.835704 1.035164 0.988639 0.997988 1.068242 1.110914 0.796198 1.129479 0.975380 1.023701 0.989917 1.048675 7.193821 0.020910
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at lhyox_SD 21 0.748025 0.900664 1.020030 0.832502 0.989739 1.142473 1.051702 0.963747 1.088617 0.861450 0.962769 1.143728 1.042580 23.822375 0.041750
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at lhyox_SD 16 0.783286 1.025306 1.120616 0.779254 0.975255 1.382042 0.700257 1.012564 1.129950 0.844975 0.937107 1.417752 0.674923 3.097814 0.031453
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at lhyox_SD 22 0.738648 1.294938 1.049655 0.862844 0.822014 1.136962 0.920536 1.246034 1.015983 0.811537 0.775942 1.190493 0.873061 16.617740 0.077673
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at lhyox_SD 12 0.799949 0.768038 1.083006 0.888208 1.029955 1.094125 1.081953 0.817632 1.143005 0.935430 1.108537 1.038824 1.011285 7.491294 0.033477
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at lhyox_SD 12 0.820659 0.280069 1.142066 0.738817 1.073943 1.533391 1.340583 0.259888 1.049257 0.777591 1.106271 1.475215 1.222910 9.108525 0.185098
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at lhyox_SD 16 0.731745 0.492580 1.160077 0.610433 1.024917 1.489605 1.194361 0.462759 1.112834 0.652942 1.066844 1.432430 1.300218 10.170943 0.152898
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at lhyox_SD 15 0.844032 0.457312 0.949487 0.780615 1.163792 1.472553 1.132207 0.424235 0.996986 0.746889 1.241944 1.476764 1.157216 8.860030 0.187095
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at lhyox_SD 16 0.949361 0.885275 0.959469 0.907649 1.105282 1.092729 1.149988 0.921416 0.901436 0.894144 1.049547 1.056246 1.076819 10.375726 0.056494
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at lhyox_SD 13 0.949519 0.450109 0.940429 1.014379 1.205070 1.110688 1.230785 0.478786 1.025724 0.989847 1.226078 1.220261 1.107844 7.450266 0.136150
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at lhyox_SD 13 0.894753 0.150400 0.842085 0.845451 1.366181 1.501816 1.288753 0.138414 0.906399 0.814168 1.348446 1.445991 1.351894 8.445443 0.263411
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at lhyox_SD 4 0.579586 0.945770 1.179763 0.928697 0.994703 1.087145 0.908226 1.002082 1.072272 0.873586 0.942753 1.155941 0.909062 18.879560 0.001915
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at lhyox_SD 17 0.935786 0.853748 0.919320 0.333967 0.668114 2.184654 1.048123 0.794043 0.972148 0.310320 0.716377 2.246487 0.952700 11.629555 0.282512
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at lhyox_SD 21 0.852585 0.952110 1.129292 0.541909 0.990035 1.422052 1.124306 0.949525 1.050306 0.515331 0.957483 1.336305 1.031347 23.441390 0.122345
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at lhyox_SD 19 0.795351 0.864069 1.005988 0.998959 0.896209 1.067802 1.137491 0.848374 0.984766 1.075397 0.843448 1.036899 1.240599 12.706511 0.030667
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at lhyox_SD 8 0.740648 1.125387 0.987654 0.973663 0.988377 1.030627 0.827662 1.088938 1.065311 0.968156 0.948010 1.103162 0.893056 15.084425 0.014644
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at lhyox_SD 23 0.936674 1.030079 1.016646 0.888360 0.706322 1.163979 1.106900 1.108449 1.070416 0.877592 0.701232 1.184598 1.145427 20.501492 0.088617
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at lhyox_SD 9 0.975484 0.977969 1.077722 1.079695 1.061308 1.025089 0.738981 0.979428 1.034367 1.093462 1.084080 1.043562 0.804338 9.364556 0.062999
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at lhyox_SD 8 0.678204 1.082776 0.907421 1.134158 0.984749 1.003898 0.855521 1.117402 0.857599 1.195100 0.953064 1.018746 0.889566 1.951638 0.027017
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at lhyox_SD 13 0.765462 1.012166 1.033184 1.001915 1.038567 1.024973 0.956394 0.947393 0.939921 0.974663 1.130361 0.994582 0.945880 6.340677 0.022568
TAIR:ATMG00150 - - - - TAIR9 244949_at lhyox_SD 12 0.772424 1.053439 0.887116 0.943850 1.145540 0.969539 1.019054 0.960364 0.933391 0.857779 1.183530 0.965413 1.080985 9.867698 0.035128
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at lhyox_SD 4 0.836518 0.658907 1.589933 0.838107 0.830559 1.299320 0.788538 0.705452 1.615128 0.782692 0.880030 1.185571 0.825763 23.935635 0.052450
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at lhyox_SD 19 0.825591 0.814507 1.045275 0.992451 0.803582 1.065500 1.237102 0.789154 1.086602 0.928007 0.827490 1.093544 1.316785 13.715448 0.052922
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at lhyox_SD 1 0.972813 1.388282 1.018763 0.923169 0.878388 0.807181 0.882710 1.491161 1.106627 0.888104 0.962422 0.847508 0.805686 19.531622 0.109751
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at lhyox_SD 4 0.826787 0.753419 1.387778 0.876759 0.904603 1.097067 0.850649 0.693500 1.422527 0.962829 0.951626 1.167960 0.931282 1.172412 0.045646
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at lhyox_SD 23 0.916704 1.322964 0.885671 0.911849 0.959457 0.888379 1.042078 1.199813 0.890312 0.957773 1.016700 0.819023 1.105982 17.055724 0.061892
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at lhyox_SD 21 0.861005 1.110073 1.086589 0.814838 1.014827 1.014586 1.083427 1.148311 1.041014 0.810392 0.917991 0.947045 1.010907 16.519620 0.057885
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at lhyox_SD 12 0.857309 0.883601 1.004402 0.984216 1.047263 1.034895 1.012265 0.942020 0.989214 1.015770 1.126720 1.017165 0.942470 6.109019 0.033364
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at lhyox_SD 23 0.927255 1.205497 0.965962 0.905598 0.856953 0.985128 1.039033 1.201284 1.013600 0.936614 0.885816 0.887925 1.116590 17.227584 0.074346
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at lhyox_SD 13 0.916284 0.984407 0.983961 0.923362 1.129493 1.007726 0.947629 1.004724 0.935756 0.950877 1.227613 1.020290 0.884163 6.488654 0.037250
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at lhyox_SD 17 0.969692 0.806367 0.950932 0.850048 0.743562 1.567804 1.032922 0.840143 0.944439 0.859239 0.794468 1.642556 0.967519 10.921704 0.120691
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at lhyox_SD 0 0.825041 1.292676 0.772347 0.971885 1.033188 0.932561 0.930208 1.291211 0.783885 0.940463 1.106882 1.015402 0.929292 21.530226 0.030642
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at lhyox_SD 22 0.724846 1.355339 0.691167 0.977518 1.192272 0.507915 1.330861 1.259309 0.751056 0.917959 1.201043 0.489611 1.325951 16.773366 0.072397
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at lhyox_SD 12 0.739684 0.499596 1.213448 0.760775 1.056592 1.378390 1.084241 0.493840 1.191986 0.697073 1.005653 1.428220 1.190187 9.384515 0.113459
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at lhyox_SD 10 0.923072 0.694931 1.070028 1.145035 1.147694 1.079048 0.882218 0.679173 1.104243 1.198741 1.196465 1.004581 0.797843 4.168696 0.118022
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at lhyox_SD 12 0.950654 0.593673 1.128654 1.063824 1.183095 1.074530 1.076693 0.537996 1.053000 0.985444 1.194033 1.124645 0.984413 6.077786 0.104047
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at lhyox_SD 11 0.713417 0.674192 1.144224 0.762284 1.176506 1.348914 0.867032 0.673444 1.258524 0.820020 1.156595 1.225612 0.892654 7.140266 0.085678
TAIR:ATCG00600 - - - - TAIR9 244966_at lhyox_SD 12 0.976760 0.432904 0.982851 1.190692 1.555345 1.264148 0.767095 0.392036 0.912539 1.152779 1.432785 1.161402 0.755425 6.337973 0.237491
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at lhyox_SD 16 0.751996 0.736275 1.081672 0.817139 1.128771 1.124614 1.059335 0.743517 1.049272 0.872228 1.151876 1.181558 1.053742 3.501732 0.071046
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at lhyox_SD 11 0.955887 0.759884 0.849958 1.118644 1.352347 0.822737 0.939088 0.832778 0.906024 1.080044 1.460080 0.902514 0.975902 5.237676 0.114459
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at lhyox_SD 11 0.947889 0.894465 0.963602 1.072812 1.367597 0.920189 0.870185 0.941052 0.890149 1.057784 1.232076 0.971410 0.818679 4.719447 0.088594
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at lhyox_SD 16 0.840263 0.725896 1.301893 0.687495 0.752851 1.642380 0.812481 0.738509 1.293150 0.720354 0.790921 1.776323 0.757747 10.290169 0.078939
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at lhyox_SD 15 0.817674 0.718552 1.088782 0.826939 1.094765 1.331457 0.995673 0.718691 0.992012 0.750209 1.122439 1.340921 1.019557 9.076465 0.103048
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at lhyox_SD 11 0.757325 0.151139 1.565499 0.746175 0.943292 1.767108 0.813915 0.138509 1.582168 0.780270 0.857572 1.809243 0.845108 7.088497 0.144083
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at lhyox_SD 16 0.876457 0.702631 1.040164 0.904128 0.899526 1.458486 0.957960 0.748137 1.089542 0.942769 0.960600 1.379718 0.916339 3.309365 0.082011
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at lhyox_SD 13 0.891465 0.190817 1.048764 0.888529 1.374543 1.399345 1.157243 0.191848 0.949518 0.851780 1.445214 1.363210 1.139189 7.615146 0.232216
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at lhyox_SD 11 0.948529 0.274962 1.295153 1.024806 1.225162 1.174888 0.944793 0.289246 1.352787 0.963473 1.298031 1.156085 1.000615 5.352930 0.154033
TAIR:ATCG00720 - - - - PPDB 244976_at lhyox_SD 11 0.953726 0.741741 1.160463 0.996529 1.087943 1.023504 0.937209 0.673056 1.089119 1.074302 1.118319 1.114925 0.982891 4.958728 0.070197
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at lhyox_SD 22 0.802946 0.975620 1.162246 0.767068 0.767562 1.311542 1.046618 0.896682 1.114423 0.761200 0.706361 1.414554 1.076125 22.165712 0.084945
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at lhyox_SD 9 0.757285 0.970617 1.037777 1.037584 1.139744 0.966778 0.882882 0.967641 1.082175 0.954894 1.167127 0.969965 0.822817 3.061738 0.048763
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at lhyox_SD 11 0.919635 0.908950 0.897362 1.131752 1.245925 0.851981 1.008095 0.967913 0.819953 1.099415 1.272076 0.887418 0.909159 4.843600 0.070641
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at lhyox_SD 10 0.886567 0.932377 0.973421 1.152410 1.187420 0.823542 0.970468 0.873511 0.921793 1.066149 1.217001 0.873997 1.007911 3.902741 0.060548
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at lhyox_SD 10 0.865615 0.568892 0.595922 1.335895 1.524418 0.914466 1.104336 0.590846 0.602840 1.364026 1.483236 0.889232 1.025891 6.047869 0.202952
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at lhyox_SD 15 0.950215 0.995768 0.640716 1.131967 1.019826 1.161901 1.038664 0.947463 0.642279 1.209779 1.107902 1.081055 1.022679 8.412034 0.083077
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at lhyox_SD 16 0.888557 1.029836 0.727025 0.833094 1.030604 1.281951 0.966712 1.114717 0.704484 0.880231 1.093514 1.284955 1.052877 10.832006 0.109104
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at lhyox_SD 10 0.880565 1.024977 0.614039 1.241754 1.371051 0.847060 0.921085 0.995480 0.624236 1.304455 1.351137 0.821241 0.883483 5.210831 0.109628
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at lhyox_SD 10 0.866859 0.758699 0.390108 1.481400 1.669507 0.679904 1.043116 0.789074 0.381788 1.364821 1.603007 0.708002 1.130574 5.921089 0.197460
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at lhyox_SD 13 0.899386 0.862984 0.815817 1.095930 1.236295 1.084770 1.065342 0.841215 0.757660 1.008697 1.171557 1.041928 1.017804 7.661557 0.091064
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at lhyox_SD 15 0.881773 0.959013 0.893200 1.003540 1.104535 1.086302 1.067192 0.917287 0.864730 1.059778 1.049231 1.022629 0.972563 8.092655 0.045369
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at lhyox_SD 12 0.930578 0.683857 1.051782 1.009859 1.161998 1.140384 1.036731 0.639119 0.974094 0.987734 1.099943 1.149117 1.065383 7.158771 0.088938
TAIR:ATCG01280 - - - - TAIR9 244989_s_at lhyox_SD 18 0.738511 1.026799 0.953184 1.003655 0.922776 1.030162 1.084842 0.941394 1.037615 0.948096 0.841613 1.126376 1.083488 14.313026 0.033559
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at lhyox_SD 9 0.839184 0.693010 1.017233 1.585440 0.951039 1.164505 0.537284 0.747177 0.941551 1.635645 0.972357 1.182686 0.572073 3.284657 0.190606
* Row count is limited to 100.