AtGenExpress_ATTED_Flowering_mean |
This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_ATTED_Fruit_Seeds_mean |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_ATTED_Leaf_mean |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_ATTED_Root_mean |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_ATTED_Seedling_mean |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_ATTED_Stem_mean |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_ATTED_Whole_Plant_mean |
This collection of Gene Expression Properties are associated with whole plant body parts. |
value
#LINK | |||||||||||
#lang | en | ||||||||||
#attribution_name | GenoCon | ||||||||||
#attribution_url | http://promotercad.org | ||||||||||
#license | http://creativecommons.org/licenses/by/3.0/deed.ja | ||||||||||
#file_name | AtGenExpress_ATTED_Root_mean | ||||||||||
#download_from | http://linkdata.org/work/rdf1s769i | ||||||||||
#namespace | ATTED | http://atted.jp/data/locus/ | |||||||||
#namespace | HeptamerElement | http://linkdata.org/work/rdf1s328i/Heptamer_elements.html# | |||||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | |||||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | |||||||||
#property | motif | motif sequence | motif position | CEG | Origin of baseline sequence | label:Col-0_root17 | label:Col-0_root_MS1 | label:Col-0_root_GM-8 | label:Col-0_root_GM5-8 | label:Col-0_root_GM-21 | label:Col-0_root_GM5-21 |
#object_type_xsd | string | string | string | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
ATTED:At1g01030.html | - | - | - | - | TAIR9 | -0.3543 | -0.6718 | -0.4085 | -0.4842 | -0.4288 | -0.5069 |
ATTED:At1g01050.html | HeptamerElement:ATATAAA | ATATAAA | 65 | 0.08 | PPDB | 0.6316 | 0.2989 | 0.0224 | 0.0813 | -0.0985 | 0.0330 |
ATTED:At1g01060.html | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | ACGTGTC | CACGTGT | CCACGTG | 168 | 169 | 170 | 0.09 | 0.10 | 0.07 | PPDB | -1.2945 | -0.8632 | -0.8518 | -0.8437 | -0.7480 | -0.7424 |
ATTED:At1g01070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT | ATAAATA | TATAAAT | AAAATAT | AAAATAT | 113 | 114 | 183 | 524 | 0.08 | 0.10 | 0.07 | 0.07 | PPDB | 1.9119 | 1.7917 | 1.0242 | 1.3325 | 1.3963 | 1.8666 |
ATTED:At1g01080.html | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | ATGGGCC | AATGGGC | 287 | 288 | 0.08 | 0.09 | PPDB | -2.2719 | -1.9903 | -2.1833 | -2.0330 | -2.0553 | -2.1519 |
ATTED:At1g01090.html | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAA | ATATATA | TATATAT | ATATATA | 43 | 44 | 45 | 46 | 0.11 | 0.10 | 0.10 | 0.10 | PPDB | 0.0704 | 0.2057 | 0.0647 | 0.1510 | -0.4651 | -0.6235 |
ATTED:At1g01100.html | HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA | TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA | 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 | PPDB | 0.6938 | 0.3742 | 0.0536 | 0.0612 | 0.1665 | 0.0640 |
ATTED:At1g01110.html | - | - | - | - | PPDB | 0.2266 | -0.2235 | -0.1021 | -0.1864 | -0.5250 | -0.5581 |
ATTED:At1g01130.html | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT | AAGCCCA | AAAGCCC | GCCCAAT | 36 | 37 | 86 | 0.07 | 0.06 | 0.07 | PPDB | -0.7697 | -0.7630 | -0.8314 | -0.7422 | -1.0648 | -0.9618 |
ATTED:At1g01140.html | HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA | ACGTGGC | ACGCGGA | 78 | 113 | 0.07 | 0.07 | PPDB | -3.5983 | -3.2126 | -4.1932 | -3.8473 | -4.4004 | -4.1450 |
ATTED:At1g01150.html | HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | AAACCCT | AAACCCT | TAAACCC | 382 | 407 | 408 | 0.14 | 0.14 | 0.10 | TAIR9 | -0.0751 | 0.0111 | -0.0242 | -0.0199 | -0.0696 | -0.0740 |
ATTED:At1g01160.html | HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT | GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT | 166 | 193 | 194 | 212 | 0.07 | 0.07 | 0.07 | 0.06 | PPDB | -0.1529 | -0.1242 | -0.1632 | -0.3854 | -0.1361 | -0.1996 |
ATTED:At1g01170.html | HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT | GATAAGA | AGATAAG | TTATCCA | GCCCATT | 18 | 19 | 38 | 64 | 0.06 | 0.06 | 0.09 | 0.10 | PPDB | -2.4883 | -2.3121 | -1.7107 | -1.9609 | -0.8098 | -1.5417 |
ATTED:At1g01200.html | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | ATATAAA | ATATAAA | ATATAAA | 38 | 298 | 322 | 0.08 | 0.08 | 0.08 | TAIR9 | 0.8094 | 1.1559 | 0.5474 | 0.8744 | 0.5661 | 0.4771 |
ATTED:At1g01220.html | HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | CTCCAGA | TGACTTT | TTGACTT | TTTGACT | 43 | 108 | 109 | 110 | 0.06 | 0.06 | 0.07 | 0.07 | TAIR9 | -0.0800 | -0.2095 | 0.0089 | 0.2534 | -0.1910 | -0.1575 |
ATTED:At1g01225.html | HeptamerElement:TCTCTAG | TCTCTAG | 95 | 0.06 | TAIR9 | 0.3888 | 0.4589 | -0.0317 | 0.0783 | -0.1277 | -0.0210 |
ATTED:At1g01230.html | HeptamerElement:AAATATC | AAATATC | 43 | 0.13 | PPDB | 0.4825 | 0.7461 | 0.3954 | 0.5556 | 0.2695 | 0.2987 |
ATTED:At1g01240.html | HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG | CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG | 117 | 132 | 133 | 477 | 478 | 518 | 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 | PPDB | -0.0771 | -0.3315 | -0.1793 | -0.3043 | 0.0564 | 0.0371 |
ATTED:At1g01280.html | HeptamerElement:TATATAT | TATATAT | 39 | 0.10 | TAIR9 | -0.4483 | -0.4105 | -0.5033 | -0.5225 | -0.4999 | -0.4712 |
ATTED:At1g01290.html | HeptamerElement:AACCCTA | AACCCTA | 32 | 0.13 | TAIR9 | 0.1396 | -0.2101 | -0.1951 | -0.2084 | -0.3240 | -0.2437 |
ATTED:At1g01300.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA | GATATTT | AGATATT | TTATCCA | 128 | 129 | 177 | 0.10 | 0.10 | 0.06 | PPDB | -0.3546 | -0.3759 | -0.7979 | -0.5348 | -1.1942 | -1.3052 |
ATTED:At1g01310.html | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA | TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA | 52 | 53 | 54 | 60 | 61 | 0.06 | 0.07 | 0.06 | 0.06 | 0.07 | TAIR9 | -0.5468 | -0.5841 | -0.5807 | -0.6123 | -0.5152 | -0.6583 |
ATTED:At1g01320.html | - | - | - | - | PPDB | -3.9094 | -4.0749 | -2.5955 | -3.4616 | -3.0461 | -3.5670 |
ATTED:At1g01430.html | HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT | CATGCAA | CCGACAT | AATATCT | 150 | 191 | 223 | 0.08 | 0.06 | 0.07 | PPDB | -0.1207 | -0.1566 | -0.0030 | 0.0593 | -0.4728 | -0.7608 |
ATTED:At1g01440.html | - | - | - | - | PPDB | 0.0710 | -0.1244 | 0.5139 | 0.1064 | 0.5207 | 0.0981 |
ATTED:At1g01470.html | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC | AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC | 115 | 116 | 152 | 153 | 233 | 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | PPDB | 1.6447 | 1.3346 | 1.1364 | 1.5480 | 1.0254 | 1.0872 |
ATTED:At1g01480.html | HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA | TATATAA | ATATAAA | TATATAA | CTATATA | 27 | 331 | 332 | 333 | 0.10 | 0.08 | 0.10 | 0.13 | PPDB | 0.3480 | 0.3566 | 0.0958 | 0.0984 | -0.4070 | -0.1168 |
ATTED:At1g01490.html | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.9010 | 0.1757 | 0.2832 | 0.4983 | 0.5044 | 0.3589 |
ATTED:At1g01500.html | HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG | AAACCCT | AATATCT | AAATATC | ACACGTG | 5 | 13 | 14 | 136 | 0.14 | 0.11 | 0.11 | 0.08 | PPDB | -0.6953 | -0.1931 | -0.2066 | -0.3500 | -0.1677 | -0.3290 |
ATTED:At1g01510.html | HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC | TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC | 12 | 44 | 45 | 46 | 111 | 0.07 | 0.08 | 0.10 | 0.13 | 0.09 | PPDB | 0.5348 | 0.0718 | 0.3241 | 0.1202 | 0.1647 | 0.0393 |
ATTED:At1g01520.html | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | CACGTGT | ACACGTG | 64 | 65 | 0.08 | 0.08 | TAIR9 | -0.2930 | -0.2993 | -0.3222 | -0.3358 | -0.2273 | -0.2891 |
ATTED:At1g01540.html | HeptamerElement:CATGCAA | HeptamerElement:CCACACA | CATGCAA | CCACACA | 38 | 43 | 0.08 | 0.07 | PPDB | -0.4953 | -0.6614 | -0.6705 | -0.6746 | -0.7510 | -0.7698 |
ATTED:At1g01550.html | HeptamerElement:CGTCACA | CGTCACA | 107 | 0.06 | PPDB | 0.5405 | 0.2980 | 0.3693 | 0.1437 | 0.8952 | 0.8175 |
ATTED:At1g01560.html | - | - | - | - | PPDB | -0.8698 | -0.4279 | -1.5918 | -1.1823 | -1.0430 | -0.9715 |
ATTED:At1g01600.html | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA | 27 | 28 | 29 | 524 | 525 | 526 | 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 | PPDB | -1.0766 | -0.0372 | -1.0159 | -0.8190 | -1.2324 | -1.0201 |
ATTED:At1g01610.html | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC | CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC | 24 | 34 | 52 | 71 | 72 | 0.06 | 0.06 | 0.06 | 0.09 | 0.06 | PPDB | -1.1033 | 0.7221 | 0.7399 | 0.9396 | -0.0112 | -0.0530 |
ATTED:At1g01620.html | HeptamerElement:TTATCCA | TTATCCA | 135 | 0.09 | PPDB | 1.4282 | 0.7399 | 1.1646 | 0.7890 | 1.0478 | 0.5288 |
ATTED:At1g01630.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | 83 | 84 | 85 | 86 | 103 | 0.07 | 0.07 | 0.10 | 0.08 | 0.07 | PPDB | 0.0515 | 0.5644 | 0.3043 | 0.5458 | 0.1362 | 0.1879 |
ATTED:At1g01650.html | - | - | - | - | PPDB | 0.2069 | -0.3238 | -0.2252 | -0.3360 | -0.1112 | -0.2699 |
ATTED:At1g01670.html | HeptamerElement:ACGTGTC | ACGTGTC | 64 | 0.10 | PPDB | 0.2189 | -0.0639 | -0.1049 | -0.1049 | 0.2454 | 0.2076 |
ATTED:At1g01710.html | HeptamerElement:ACACGTG | ACACGTG | 93 | 0.09 | PPDB | -0.5860 | -0.5661 | -0.4417 | -0.2641 | -0.2300 | -0.1981 |
ATTED:At1g01720.html | HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC | 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 | 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 | PPDB | 1.1808 | 0.2783 | 0.6188 | 0.3055 | 0.8278 | 1.2113 |
ATTED:At1g01730.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC | 96 | 97 | 98 | 99 | 110 | 0.07 | 0.08 | 0.11 | 0.08 | 0.08 | PPDB | 0.2115 | 0.0393 | 0.1597 | -0.0077 | 0.4700 | 0.3957 |
ATTED:At1g01740.html | - | - | - | - | TAIR9 | 0.0226 | -0.2928 | -0.2013 | -0.0615 | 0.0576 | -0.0858 |
ATTED:At1g01770.html | HeptamerElement:ATATATA | HeptamerElement:TATATAT | ATATATA | TATATAT | 57 | 58 | 0.09 | 0.09 | PPDB | -0.2934 | -1.4476 | 0.2060 | -0.5940 | 0.2819 | 0.0944 |
ATTED:At1g01790.html | - | - | - | - | PPDB | -1.2583 | -1.5435 | -1.2832 | -1.3734 | -1.4278 | -1.5151 |
ATTED:At1g01820.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 33 | 34 | 0.09 | 0.09 | PPDB | 0.1663 | 0.3334 | 0.4777 | 0.1431 | 0.9694 | 0.6642 |
ATTED:At1g01840.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 | 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.6670 | -0.3184 | -0.3992 | -0.2377 | -0.4957 | -0.5334 |
ATTED:At1g01860.html | - | - | - | - | PPDB | -0.6444 | -0.5953 | -0.5921 | -0.8649 | -0.5092 | -0.5769 |
ATTED:At1g01900.html | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | 46 | 47 | 48 | 49 | 113 | 236 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | PPDB | -0.5928 | -0.7569 | -1.2986 | -0.8712 | -1.3464 | -1.4660 |
ATTED:At1g01920.html | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC | 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 | 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 | PPDB | 0.4134 | -0.0959 | 0.1451 | -0.0549 | 0.1913 | -0.1146 |
ATTED:At1g01930.html | HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT | ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT | 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 | 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 | PPDB | -0.2201 | -0.2949 | -0.0162 | -0.0981 | -0.1708 | -0.2349 |
ATTED:At1g01940.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT | 111 | 112 | 113 | 114 | 122 | 123 | 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 | PPDB | 0.8347 | 0.3387 | 0.0988 | 0.2897 | 0.1509 | 0.0225 |
ATTED:At1g01950.html | HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT | AAAATAT | CTCTCTT | 20 | 169 | 0.07 | 0.06 | PPDB | 0.0848 | -0.3268 | -0.2402 | -0.1948 | -0.2978 | -0.4024 |
ATTED:At1g01970.html | HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC | 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 | 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 | PPDB | -1.7604 | -1.4554 | -1.3507 | -1.6610 | -1.5874 | -1.7605 |
ATTED:At1g01990.html | HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT | 37 | 61 | 62 | 63 | 74 | 123 | 124 | 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 | PPDB | -0.4865 | -0.5086 | -0.5065 | -0.5725 | -0.3607 | -0.3823 |
ATTED:At1g02020.html | HeptamerElement:TGCCGAC | TGCCGAC | 118 | 0.08 | PPDB | -0.9883 | -0.8890 | -0.3715 | -0.5072 | -0.2080 | -0.4609 |
ATTED:At1g02050.html | - | - | - | - | TAIR9 | -0.1406 | -0.7832 | -0.0632 | -0.4136 | 0.2146 | -0.3104 |
ATTED:At1g02060.html | HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT | AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT | 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 | 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 | PPDB | 0.2757 | -0.2164 | 0.3208 | -0.2539 | 0.1111 | -0.0620 |
ATTED:At1g02070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 | 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | TAIR9 | -0.6893 | -1.1248 | -1.0076 | -1.0058 | -0.9591 | -0.9635 |
ATTED:At1g02080.html | HeptamerElement:AACCCTA | AACCCTA | 436 | 0.10 | PPDB | 0.3107 | -0.7318 | -0.0069 | -0.0885 | 0.1554 | 0.1199 |
ATTED:At1g02090.html | HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA | ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA | 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 | 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | 0.3510 | 0.5044 | 0.2851 | 0.2951 | -0.0543 | 0.1263 |
ATTED:At1g02100.html | HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG | 138 | 139 | 158 | 159 | 160 | 0.07 | 0.08 | 0.10 | 0.10 | 0.08 | PPDB | 0.6035 | 0.3673 | 0.7703 | 0.2992 | 0.8579 | 0.5622 |
ATTED:At1g02120.html | HeptamerElement:GGCCCAA | GGCCCAA | 176 | 0.07 | TAIR9 | 0.1763 | -0.1582 | 0.3488 | 0.0227 | 0.4647 | 0.2257 |
ATTED:At1g02130.html | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC | 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 | PPDB | 0.3919 | 0.3577 | 0.3533 | 0.2057 | 0.3345 | 0.2487 |
ATTED:At1g02140.html | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA | CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA | 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 | 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 | PPDB | 0.1856 | 0.2406 | 0.1582 | 0.1489 | 0.2473 | 0.1123 |
ATTED:At1g02160.html | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA | GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA | 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 | 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 | PPDB | 0.1087 | -0.2894 | -0.3770 | -0.3705 | 0.0543 | -0.2719 |
ATTED:At1g02180.html | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA | 69 | 70 | 71 | 72 | 88 | 0.07 | 0.07 | 0.09 | 0.06 | 0.07 | PPDB | -0.7676 | -0.5924 | -0.8964 | -0.4529 | -0.8442 | -0.8017 |
ATTED:At1g02190.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA | TATATAA | CTATATA | TCTATAT | CTCTATA | 28 | 29 | 30 | 31 | 0.11 | 0.13 | 0.10 | 0.10 | PPDB | -1.8344 | -2.0493 | -1.9445 | -1.8102 | -1.9617 | -1.9766 |
ATTED:At1g02205.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA | TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA | 34 | 35 | 46 | 47 | 70 | 0.11 | 0.13 | 0.07 | 0.08 | 0.06 | PPDB | -4.5390 | -3.6903 | -4.2145 | -3.5285 | -4.1905 | -3.6649 |
ATTED:At1g02260.html | HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC | CGTGGCA | ACGTGGC | 46 | 47 | 0.08 | 0.09 | PPDB | 0.1898 | 0.2032 | 0.2094 | 0.1752 | 0.0993 | 0.3295 |
ATTED:At1g02270.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 126 | 127 | 0.09 | 0.09 | PPDB | 0.0209 | -0.1646 | -0.3113 | -0.1619 | -0.2936 | -0.2050 |
ATTED:At1g02280.html | HeptamerElement:GATAAGG | GATAAGG | 15 | 0.07 | PPDB | -0.9842 | -1.4599 | -0.9437 | -1.5244 | -1.0610 | -1.5821 |
ATTED:At1g02310.html | HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA | CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA | 25 | 34 | 35 | 36 | 131 | 541 | 542 | 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 | PPDB | 0.7598 | 0.9340 | 0.0691 | 0.7628 | 1.7013 | 2.1320 |
ATTED:At1g02330.html | HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT | GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT | 90 | 105 | 106 | 107 | 179 | 180 | 199 | 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | 0.4115 | 0.0843 | 0.0999 | 0.2114 | 0.1280 | 0.0177 |
ATTED:At1g02340.html | HeptamerElement:CCACACA | CCACACA | 114 | 0.06 | PPDB | -1.3526 | 0.3038 | 1.2418 | 0.3495 | 2.2014 | 1.4100 |
ATTED:At1g02360.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT | TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT | 30 | 31 | 32 | 52 | 53 | 416 | 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 | PPDB | 2.1812 | 4.9033 | 4.7319 | 4.9313 | 4.3133 | 4.1763 |
ATTED:At1g02370.html | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | AACCCTA | AAACCCT | TAAACCC | TTAAACC | 31 | 32 | 33 | 34 | 0.11 | 0.12 | 0.08 | 0.06 | PPDB | 0.1502 | -0.1503 | -0.0560 | -0.2747 | 0.0749 | -0.3802 |
ATTED:At1g02390.html | HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC | TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC | 28 | 71 | 122 | 172 | 173 | 180 | 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 | PPDB | 0.3794 | -0.2608 | -0.7618 | -0.6258 | -0.6763 | -0.2527 |
ATTED:At1g02400.html | HeptamerElement:AATAATT | HeptamerElement:AATAATT | AATAATT | AATAATT | 236 | 332 | 0.06 | 0.06 | PPDB | 1.8454 | 2.2001 | 1.2197 | 1.7042 | 1.8169 | 2.1029 |
ATTED:At1g02410.html | HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT | 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 | 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | PPDB | -0.4635 | 0.0756 | -0.2269 | -0.3352 | -0.2911 | -0.2499 |
ATTED:At1g02450.html | HeptamerElement:AAATATC | HeptamerElement:AAATATC | AAATATC | AAATATC | 165 | 187 | 0.07 | 0.07 | PPDB | -0.1157 | -1.3494 | -1.5719 | -1.5020 | -1.1809 | -1.3164 |
ATTED:At1g02460.html | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT | ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT | 47 | 48 | 49 | 50 | 68 | 126 | 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 | TAIR9 | 0.0448 | 0.3788 | 0.2111 | 0.2854 | 0.0380 | -0.0302 |
ATTED:At1g02470.html | HeptamerElement:AAAGTCA | AAAGTCA | 164 | 0.07 | TAIR9 | -1.1665 | -0.7683 | -1.2362 | -1.1608 | -1.0434 | -0.9591 |
ATTED:At1g02475.html | - | - | - | - | PPDB | -2.5583 | -1.9275 | -1.6768 | -1.9201 | -1.6232 | -1.7397 |