AtGenExpress_ATTED_Flowering_mean |
This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_ATTED_Fruit_Seeds_mean |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_ATTED_Leaf_mean |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_ATTED_Root_mean |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_ATTED_Seedling_mean |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_ATTED_Stem_mean |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_ATTED_Whole_Plant_mean |
This collection of Gene Expression Properties are associated with whole plant body parts. |
value
#LINK | ||||||||
#lang | en | |||||||
#attribution_name | GenoCon | |||||||
#attribution_url | http://promotercad.org | |||||||
#license | http://creativecommons.org/licenses/by/3.0/deed.ja | |||||||
#file_name | AtGenExpress_ATTED_Whole_Plant_mean | |||||||
#download_from | http://linkdata.org/work/rdf1s769i | |||||||
#namespace | ATTED | http://atted.jp/data/locus/ | ||||||
#namespace | HeptamerElement | http://linkdata.org/work/rdf1s328i/Heptamer_elements.html# | ||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | ||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | ||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | ||||||
#property | motif | motif sequence | motif position | CEG | Origin of baseline sequence | label:Col-0_whole21d | label:Col-0_whole22d | label:Col-0_whole23d |
#object_type_xsd | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
ATTED:At1g01030.html | - | - | - | - | TAIR9 | -0.4400 | -0.3897 | -0.3437 |
ATTED:At1g01050.html | HeptamerElement:ATATAAA | ATATAAA | 65 | 0.08 | PPDB | 0.1613 | 0.1834 | 0.0315 |
ATTED:At1g01060.html | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | ACGTGTC | CACGTGT | CCACGTG | 168 | 169 | 170 | 0.09 | 0.10 | 0.07 | PPDB | -0.1273 | 0.6275 | 0.6216 |
ATTED:At1g01070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT | ATAAATA | TATAAAT | AAAATAT | AAAATAT | 113 | 114 | 183 | 524 | 0.08 | 0.10 | 0.07 | 0.07 | PPDB | 0.2694 | 0.4306 | 0.1483 |
ATTED:At1g01080.html | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | ATGGGCC | AATGGGC | 287 | 288 | 0.08 | 0.09 | PPDB | 1.1337 | 1.2453 | 0.9973 |
ATTED:At1g01090.html | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAA | ATATATA | TATATAT | ATATATA | 43 | 44 | 45 | 46 | 0.11 | 0.10 | 0.10 | 0.10 | PPDB | -0.1694 | -0.1300 | -0.1552 |
ATTED:At1g01100.html | HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA | TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA | 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 | PPDB | -0.0449 | -0.1232 | -0.0930 |
ATTED:At1g01110.html | - | - | - | - | PPDB | -0.6077 | -0.3136 | -0.1963 |
ATTED:At1g01130.html | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT | AAGCCCA | AAAGCCC | GCCCAAT | 36 | 37 | 86 | 0.07 | 0.06 | 0.07 | PPDB | -0.3851 | -0.6502 | -0.4422 |
ATTED:At1g01140.html | HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA | ACGTGGC | ACGCGGA | 78 | 113 | 0.07 | 0.07 | PPDB | 1.0573 | 0.4543 | 0.7257 |
ATTED:At1g01150.html | HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | AAACCCT | AAACCCT | TAAACCC | 382 | 407 | 408 | 0.14 | 0.14 | 0.10 | TAIR9 | -0.0060 | 0.0115 | -0.0044 |
ATTED:At1g01160.html | HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT | GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT | 166 | 193 | 194 | 212 | 0.07 | 0.07 | 0.07 | 0.06 | PPDB | -0.5925 | -0.6045 | -0.4898 |
ATTED:At1g01170.html | HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT | GATAAGA | AGATAAG | TTATCCA | GCCCATT | 18 | 19 | 38 | 64 | 0.06 | 0.06 | 0.09 | 0.10 | PPDB | 0.5142 | 0.4372 | 0.4996 |
ATTED:At1g01200.html | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | ATATAAA | ATATAAA | ATATAAA | 38 | 298 | 322 | 0.08 | 0.08 | 0.08 | TAIR9 | 0.0296 | 0.1662 | 0.1247 |
ATTED:At1g01220.html | HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | CTCCAGA | TGACTTT | TTGACTT | TTTGACT | 43 | 108 | 109 | 110 | 0.06 | 0.06 | 0.07 | 0.07 | TAIR9 | 0.4420 | 0.5302 | 0.6148 |
ATTED:At1g01225.html | HeptamerElement:TCTCTAG | TCTCTAG | 95 | 0.06 | TAIR9 | -0.4011 | -0.3104 | -0.3401 |
ATTED:At1g01230.html | HeptamerElement:AAATATC | AAATATC | 43 | 0.13 | PPDB | 0.0879 | 0.1737 | 0.2039 |
ATTED:At1g01240.html | HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG | CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG | 117 | 132 | 133 | 477 | 478 | 518 | 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 | PPDB | 0.2075 | 0.4834 | 0.5709 |
ATTED:At1g01280.html | HeptamerElement:TATATAT | TATATAT | 39 | 0.10 | TAIR9 | -0.3351 | -0.3145 | -0.0706 |
ATTED:At1g01290.html | HeptamerElement:AACCCTA | AACCCTA | 32 | 0.13 | TAIR9 | -0.2731 | 0.1172 | 0.1900 |
ATTED:At1g01300.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA | GATATTT | AGATATT | TTATCCA | 128 | 129 | 177 | 0.10 | 0.10 | 0.06 | PPDB | -0.2588 | -0.2515 | -0.1367 |
ATTED:At1g01310.html | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA | TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA | 52 | 53 | 54 | 60 | 61 | 0.06 | 0.07 | 0.06 | 0.06 | 0.07 | TAIR9 | -0.4730 | -0.5557 | -0.5184 |
ATTED:At1g01320.html | - | - | - | - | PPDB | 0.9011 | 1.0581 | 1.0457 |
ATTED:At1g01430.html | HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT | CATGCAA | CCGACAT | AATATCT | 150 | 191 | 223 | 0.08 | 0.06 | 0.07 | PPDB | 0.2832 | 0.5816 | 0.3841 |
ATTED:At1g01440.html | - | - | - | - | PPDB | 0.0844 | 0.1158 | 0.2534 |
ATTED:At1g01470.html | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC | AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC | 115 | 116 | 152 | 153 | 233 | 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | PPDB | 1.8599 | 1.3727 | 1.2295 |
ATTED:At1g01480.html | HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA | TATATAA | ATATAAA | TATATAA | CTATATA | 27 | 331 | 332 | 333 | 0.10 | 0.08 | 0.10 | 0.13 | PPDB | -0.1633 | -0.4640 | -0.5083 |
ATTED:At1g01490.html | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.0474 | 0.1388 | 0.3956 |
ATTED:At1g01500.html | HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG | AAACCCT | AATATCT | AAATATC | ACACGTG | 5 | 13 | 14 | 136 | 0.14 | 0.11 | 0.11 | 0.08 | PPDB | -0.2619 | -0.1082 | -0.0752 |
ATTED:At1g01510.html | HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC | TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC | 12 | 44 | 45 | 46 | 111 | 0.07 | 0.08 | 0.10 | 0.13 | 0.09 | PPDB | -0.1841 | -0.1180 | -0.1339 |
ATTED:At1g01520.html | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | CACGTGT | ACACGTG | 64 | 65 | 0.08 | 0.08 | TAIR9 | -0.1883 | 0.2332 | 0.1951 |
ATTED:At1g01540.html | HeptamerElement:CATGCAA | HeptamerElement:CCACACA | CATGCAA | CCACACA | 38 | 43 | 0.08 | 0.07 | PPDB | 0.4861 | 0.3031 | 0.2821 |
ATTED:At1g01550.html | HeptamerElement:CGTCACA | CGTCACA | 107 | 0.06 | PPDB | 0.0801 | -0.0138 | 0.0351 |
ATTED:At1g01560.html | - | - | - | - | PPDB | 2.7742 | 0.4232 | 0.7263 |
ATTED:At1g01600.html | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA | 27 | 28 | 29 | 524 | 525 | 526 | 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 | PPDB | -0.4155 | -0.2183 | -0.1555 |
ATTED:At1g01610.html | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC | CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC | 24 | 34 | 52 | 71 | 72 | 0.06 | 0.06 | 0.06 | 0.09 | 0.06 | PPDB | -0.3320 | -0.1648 | -0.1856 |
ATTED:At1g01620.html | HeptamerElement:TTATCCA | TTATCCA | 135 | 0.09 | PPDB | -0.0186 | 0.0242 | -0.0555 |
ATTED:At1g01630.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | 83 | 84 | 85 | 86 | 103 | 0.07 | 0.07 | 0.10 | 0.08 | 0.07 | PPDB | 0.1430 | 0.2510 | 0.2762 |
ATTED:At1g01650.html | - | - | - | - | PPDB | -0.1100 | -0.1474 | -0.1320 |
ATTED:At1g01670.html | HeptamerElement:ACGTGTC | ACGTGTC | 64 | 0.10 | PPDB | 0.0843 | 0.0338 | 0.1802 |
ATTED:At1g01710.html | HeptamerElement:ACACGTG | ACACGTG | 93 | 0.09 | PPDB | -0.1130 | -0.0564 | -0.0953 |
ATTED:At1g01720.html | HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC | 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 | 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 | PPDB | -1.2920 | -1.4309 | -1.0339 |
ATTED:At1g01730.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC | 96 | 97 | 98 | 99 | 110 | 0.07 | 0.08 | 0.11 | 0.08 | 0.08 | PPDB | -0.3039 | -0.0998 | 0.0365 |
ATTED:At1g01740.html | - | - | - | - | TAIR9 | 0.0803 | 0.1392 | 0.1765 |
ATTED:At1g01770.html | HeptamerElement:ATATATA | HeptamerElement:TATATAT | ATATATA | TATATAT | 57 | 58 | 0.09 | 0.09 | PPDB | -0.0299 | -0.0376 | 0.0066 |
ATTED:At1g01790.html | - | - | - | - | PPDB | 0.8197 | 1.0297 | 0.9035 |
ATTED:At1g01820.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 33 | 34 | 0.09 | 0.09 | PPDB | 0.0038 | -0.0534 | 0.0660 |
ATTED:At1g01840.html | HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 | 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.3208 | -0.1250 | -0.1075 |
ATTED:At1g01860.html | - | - | - | - | PPDB | 0.2806 | 0.4066 | 0.2427 |
ATTED:At1g01900.html | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA | 46 | 47 | 48 | 49 | 113 | 236 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | PPDB | 0.2120 | 0.3924 | 0.3440 |
ATTED:At1g01920.html | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC | 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 | 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 | PPDB | -0.2181 | -0.3270 | -0.3839 |
ATTED:At1g01930.html | HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT | ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT | 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 | 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 | PPDB | -0.3038 | -0.3046 | -0.2383 |
ATTED:At1g01940.html | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT | 111 | 112 | 113 | 114 | 122 | 123 | 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 | PPDB | -0.2072 | -0.0802 | -0.1725 |
ATTED:At1g01950.html | HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT | AAAATAT | CTCTCTT | 20 | 169 | 0.07 | 0.06 | PPDB | 0.1189 | -0.3291 | -0.3703 |
ATTED:At1g01970.html | HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC | 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 | 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 | PPDB | 0.3617 | 0.6003 | 0.5517 |
ATTED:At1g01990.html | HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT | 37 | 61 | 62 | 63 | 74 | 123 | 124 | 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 | PPDB | -0.0516 | -0.2020 | -0.1196 |
ATTED:At1g02020.html | HeptamerElement:TGCCGAC | TGCCGAC | 118 | 0.08 | PPDB | -0.0023 | 0.0085 | 0.2359 |
ATTED:At1g02050.html | - | - | - | - | TAIR9 | -0.4101 | -0.4902 | -0.0700 |
ATTED:At1g02060.html | HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT | AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT | 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 | 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 | PPDB | -0.1099 | 0.0171 | -0.1156 |
ATTED:At1g02070.html | HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 | 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | TAIR9 | -0.1844 | -0.0893 | -0.0480 |
ATTED:At1g02080.html | HeptamerElement:AACCCTA | AACCCTA | 436 | 0.10 | PPDB | -0.3771 | -0.1414 | -0.0685 |
ATTED:At1g02090.html | HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA | ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA | 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 | 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 | PPDB | -0.4773 | -0.3262 | -0.3503 |
ATTED:At1g02100.html | HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG | 138 | 139 | 158 | 159 | 160 | 0.07 | 0.08 | 0.10 | 0.10 | 0.08 | PPDB | -0.0118 | 0.0311 | 0.1217 |
ATTED:At1g02120.html | HeptamerElement:GGCCCAA | GGCCCAA | 176 | 0.07 | TAIR9 | 0.1744 | 0.4512 | 0.3827 |
ATTED:At1g02130.html | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC | 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 | 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 | PPDB | -0.3445 | -0.1724 | -0.2600 |
ATTED:At1g02140.html | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA | CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA | 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 | 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 | PPDB | -0.3462 | -0.1642 | -0.1835 |
ATTED:At1g02160.html | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA | GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA | 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 | 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 | PPDB | -0.1727 | -0.2524 | -0.1561 |
ATTED:At1g02180.html | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA | 69 | 70 | 71 | 72 | 88 | 0.07 | 0.07 | 0.09 | 0.06 | 0.07 | PPDB | -0.1558 | -0.1513 | -0.3118 |
ATTED:At1g02190.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA | TATATAA | CTATATA | TCTATAT | CTCTATA | 28 | 29 | 30 | 31 | 0.11 | 0.13 | 0.10 | 0.10 | PPDB | -1.4023 | -1.3856 | -1.0626 |
ATTED:At1g02205.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA | TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA | 34 | 35 | 46 | 47 | 70 | 0.11 | 0.13 | 0.07 | 0.08 | 0.06 | PPDB | 0.0510 | 0.2285 | 0.4983 |
ATTED:At1g02260.html | HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC | CGTGGCA | ACGTGGC | 46 | 47 | 0.08 | 0.09 | PPDB | 0.0047 | 0.0427 | 0.0271 |
ATTED:At1g02270.html | HeptamerElement:GATATTT | HeptamerElement:AGATATT | GATATTT | AGATATT | 126 | 127 | 0.09 | 0.09 | PPDB | 0.7225 | 0.2474 | 0.3333 |
ATTED:At1g02280.html | HeptamerElement:GATAAGG | GATAAGG | 15 | 0.07 | PPDB | 0.5168 | 0.5735 | 0.3749 |
ATTED:At1g02310.html | HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA | CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA | 25 | 34 | 35 | 36 | 131 | 541 | 542 | 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 | PPDB | -0.6824 | -0.7749 | -0.6696 |
ATTED:At1g02330.html | HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT | GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT | 90 | 105 | 106 | 107 | 179 | 180 | 199 | 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | PPDB | -0.4892 | -0.3862 | -0.1659 |
ATTED:At1g02340.html | HeptamerElement:CCACACA | CCACACA | 114 | 0.06 | PPDB | -0.7566 | 0.2733 | 0.1543 |
ATTED:At1g02360.html | HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT | TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT | 30 | 31 | 32 | 52 | 53 | 416 | 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 | PPDB | 0.0091 | -0.2203 | -0.0591 |
ATTED:At1g02370.html | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | AACCCTA | AAACCCT | TAAACCC | TTAAACC | 31 | 32 | 33 | 34 | 0.11 | 0.12 | 0.08 | 0.06 | PPDB | -0.4944 | -0.1705 | -0.1096 |
ATTED:At1g02390.html | HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC | TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC | 28 | 71 | 122 | 172 | 173 | 180 | 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 | PPDB | 0.1153 | -0.5450 | -0.1826 |
ATTED:At1g02400.html | HeptamerElement:AATAATT | HeptamerElement:AATAATT | AATAATT | AATAATT | 236 | 332 | 0.06 | 0.06 | PPDB | 1.0017 | -1.0090 | -1.0369 |
ATTED:At1g02410.html | HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT | 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 | 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | PPDB | -0.1122 | -0.0421 | -0.0776 |
ATTED:At1g02450.html | HeptamerElement:AAATATC | HeptamerElement:AAATATC | AAATATC | AAATATC | 165 | 187 | 0.07 | 0.07 | PPDB | 0.5248 | 0.6108 | 0.9957 |
ATTED:At1g02460.html | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT | ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT | 47 | 48 | 49 | 50 | 68 | 126 | 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 | TAIR9 | 0.0080 | -0.0555 | -0.1268 |
ATTED:At1g02470.html | HeptamerElement:AAAGTCA | AAAGTCA | 164 | 0.07 | TAIR9 | -0.6016 | -0.0888 | -0.0571 |
ATTED:At1g02475.html | - | - | - | - | PPDB | 0.9483 | 1.1005 | 1.1536 |