【重要なお知らせ】 2018年11月1日より運営法人が変わります
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Developmental Coexpression (AtGenExpress gene expression + ATTED-II promoter motif) median

Developmental Microarray Expression Data (AtGenExpress) of plant developmental tissues, combined with CEG coexpression analysis regulatory (7mer) motif calculations (ATTED-II). We took the median of triplicate measurements from AtGenExpress, then sorted the developmental series into plant organs (Flower, Leaf, Root, Stem, Fruit & Seeds), with one category for seedlings (8 days old or less) and another for whole plants (older than 8 days). Gene Loci without expression data or motif data were removed from this database.

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101


Descriptions for each data table:
AtGenExpress_ATTED_Flowering_median
This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_ATTED_Fruit_Seeds_median
This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_ATTED_Leaf_median
This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_ATTED_Root_median
This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_ATTED_Seedling_median
This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_ATTED_Stem_median
This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_ATTED_Whole_Plant_median
This collection of Gene Expression Properties are associated with whole plant body parts.
Heptamer_elements A list of the 7mer sequence motifs from ATTED-II. This table lists each 7mer along with the calculated CEG value and the position from the TSS of the maximum CEG value.
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28

value

useful
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://promotercad.org
#license http://creativecommons.org/licenses/by/3.0/deed.ja
#file_name AtGenExpress_ATTED_Whole_Plant_median
#download_from http://linkdata.org/work/rdf1s584i
#namespace ATTED http://atted.jp/data/locus/
#namespace HeptamerElement http://linkdata.org/work/rdf1s328i/Heptamer_elements.html#
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif sequence motif position CEG Origin of baseline sequence label:Col-0_whole21d label:Col-0_whole22d label:Col-0_whole23d
#object_type_xsd string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
ATTED:At1g01030.html - - - - TAIR9 -0.4239 -0.4611 -0.3702
ATTED:At1g01050.html HeptamerElement:ATATAAA ATATAAA 65 0.08 PPDB 0.1759 0.1642 0.0367
ATTED:At1g01060.html HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG ACGTGTC | CACGTGT | CCACGTG 168 | 169 | 170 0.09 | 0.10 | 0.07 PPDB -0.0444 0.6436 0.5117
ATTED:At1g01070.html HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT | HeptamerElement:AAAATAT ATAAATA | TATAAAT | AAAATAT | AAAATAT 113 | 114 | 183 | 524 0.08 | 0.10 | 0.07 | 0.07 PPDB 0.1357 0.3656 0.1954
ATTED:At1g01080.html HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC ATGGGCC | AATGGGC 287 | 288 0.08 | 0.09 PPDB 1.0930 1.2172 1.0006
ATTED:At1g01090.html HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAA | ATATATA | TATATAT | ATATATA 43 | 44 | 45 | 46 0.11 | 0.10 | 0.10 | 0.10 PPDB -0.1984 -0.1079 -0.2178
ATTED:At1g01100.html HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 PPDB -0.0415 -0.0871 -0.0925
ATTED:At1g01110.html - - - - PPDB -0.5444 -0.2857 -0.1792
ATTED:At1g01130.html HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT AAGCCCA | AAAGCCC | GCCCAAT 36 | 37 | 86 0.07 | 0.06 | 0.07 PPDB -0.3752 -0.6571 -0.3742
ATTED:At1g01140.html HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA ACGTGGC | ACGCGGA 78 | 113 0.07 | 0.07 PPDB 1.1696 0.4398 0.7527
ATTED:At1g01150.html HeptamerElement:AAACCCT | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC AAACCCT | AAACCCT | TAAACCC 382 | 407 | 408 0.14 | 0.14 | 0.10 TAIR9 -0.0333 -0.0080 -0.0224
ATTED:At1g01160.html HeptamerElement:GGCCCAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT GGCCCAA | GGCCCAA | AGGCCCA | GGGCCTT 166 | 193 | 194 | 212 0.07 | 0.07 | 0.07 | 0.06 PPDB -0.6071 -0.6309 -0.4825
ATTED:At1g01170.html HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT GATAAGA | AGATAAG | TTATCCA | GCCCATT 18 | 19 | 38 | 64 0.06 | 0.06 | 0.09 | 0.10 PPDB 0.5245 0.4114 0.4890
ATTED:At1g01200.html HeptamerElement:ATATAAA | HeptamerElement:ATATAAA | HeptamerElement:ATATAAA ATATAAA | ATATAAA | ATATAAA 38 | 298 | 322 0.08 | 0.08 | 0.08 TAIR9 0.0440 0.1030 0.0673
ATTED:At1g01220.html HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT CTCCAGA | TGACTTT | TTGACTT | TTTGACT 43 | 108 | 109 | 110 0.06 | 0.06 | 0.07 | 0.07 TAIR9 0.4466 0.5073 0.5846
ATTED:At1g01225.html HeptamerElement:TCTCTAG TCTCTAG 95 0.06 TAIR9 -0.3298 -0.2705 -0.3237
ATTED:At1g01230.html HeptamerElement:AAATATC AAATATC 43 0.13 PPDB 0.0541 0.1692 0.1975
ATTED:At1g01240.html HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:ACACGTG CAGCTGT | CACGTGT | ACACGTG | CACGTGT | ACACGTG | ACACGTG 117 | 132 | 133 | 477 | 478 | 518 0.07 | 0.11 | 0.10 | 0.11 | 0.10 | 0.10 PPDB 0.0614 0.5488 0.4518
ATTED:At1g01280.html HeptamerElement:TATATAT TATATAT 39 0.10 TAIR9 -0.3762 -0.3637 -0.2333
ATTED:At1g01290.html HeptamerElement:AACCCTA AACCCTA 32 0.13 TAIR9 -0.3690 0.1360 0.1857
ATTED:At1g01300.html HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA GATATTT | AGATATT | TTATCCA 128 | 129 | 177 0.10 | 0.10 | 0.06 PPDB -0.2540 -0.2173 0.0082
ATTED:At1g01310.html HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA 52 | 53 | 54 | 60 | 61 0.06 | 0.07 | 0.06 | 0.06 | 0.07 TAIR9 -0.4627 -0.5220 -0.4992
ATTED:At1g01320.html - - - - PPDB 0.8903 0.9491 1.0602
ATTED:At1g01430.html HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT CATGCAA | CCGACAT | AATATCT 150 | 191 | 223 0.08 | 0.06 | 0.07 PPDB 0.3403 0.6644 0.3499
ATTED:At1g01440.html - - - - PPDB 0.0995 0.1115 0.2895
ATTED:At1g01470.html HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC 115 | 116 | 152 | 153 | 233 0.08 | 0.07 | 0.08 | 0.07 | 0.07 PPDB 2.0476 1.4057 1.1955
ATTED:At1g01480.html HeptamerElement:TATATAA | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA TATATAA | ATATAAA | TATATAA | CTATATA 27 | 331 | 332 | 333 0.10 | 0.08 | 0.10 | 0.13 PPDB -0.1635 -0.4790 -0.4921
ATTED:At1g01490.html HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT 7 | 8 | 75 | 93 | 95 | 97 | 99 | 152 | 153 | 155 | 157 | 159 | 161 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 PPDB -0.0597 0.1596 0.4067
ATTED:At1g01500.html HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG AAACCCT | AATATCT | AAATATC | ACACGTG 5 | 13 | 14 | 136 0.14 | 0.11 | 0.11 | 0.08 PPDB -0.2854 -0.1018 -0.0979
ATTED:At1g01510.html HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC 12 | 44 | 45 | 46 | 111 0.07 | 0.08 | 0.10 | 0.13 | 0.09 PPDB -0.2201 -0.1137 -0.1518
ATTED:At1g01520.html HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CACGTGT | ACACGTG 64 | 65 0.08 | 0.08 TAIR9 -0.1845 0.2138 0.0839
ATTED:At1g01540.html HeptamerElement:CATGCAA | HeptamerElement:CCACACA CATGCAA | CCACACA 38 | 43 0.08 | 0.07 PPDB 0.4877 0.3150 0.3186
ATTED:At1g01550.html HeptamerElement:CGTCACA CGTCACA 107 0.06 PPDB 0.0835 0.0105 0.0365
ATTED:At1g01560.html - - - - PPDB 2.9691 0.3506 0.8886
ATTED:At1g01600.html HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA | HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA TATAAAT | CTATAAA | CCTATAA | TATAAAT | CTATAAA | CCTATAA 27 | 28 | 29 | 524 | 525 | 526 0.10 | 0.09 | 0.07 | 0.10 | 0.09 | 0.07 PPDB -0.3812 -0.1944 -0.1755
ATTED:At1g01610.html HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC CTCTCTT | CTCTCTT | CTCTCTT | AAAACCC | TAAAACC 24 | 34 | 52 | 71 | 72 0.06 | 0.06 | 0.06 | 0.09 | 0.06 PPDB -0.2923 -0.1588 -0.1719
ATTED:At1g01620.html HeptamerElement:TTATCCA TTATCCA 135 0.09 PPDB -0.1419 -0.0825 0.0066
ATTED:At1g01630.html HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT 83 | 84 | 85 | 86 | 103 0.07 | 0.07 | 0.10 | 0.08 | 0.07 PPDB 0.1029 0.2503 0.2683
ATTED:At1g01650.html - - - - PPDB -0.0016 -0.1378 -0.1089
ATTED:At1g01670.html HeptamerElement:ACGTGTC ACGTGTC 64 0.10 PPDB 0.0843 0.0107 0.2088
ATTED:At1g01710.html HeptamerElement:ACACGTG ACACGTG 93 0.09 PPDB -0.1420 -0.0693 -0.0776
ATTED:At1g01720.html HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | CGTGTCC | ACGTGTC 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 113 | 114 0.11 | 0.06 | 0.09 | 0.11 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.06 | 0.09 PPDB -1.1655 -1.4962 -1.0536
ATTED:At1g01730.html HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC 96 | 97 | 98 | 99 | 110 0.07 | 0.08 | 0.11 | 0.08 | 0.08 PPDB -0.4004 -0.0610 0.0535
ATTED:At1g01740.html - - - - TAIR9 0.0308 0.1110 0.1182
ATTED:At1g01770.html HeptamerElement:ATATATA | HeptamerElement:TATATAT ATATATA | TATATAT 57 | 58 0.09 | 0.09 PPDB 0.0070 -0.0924 0.0227
ATTED:At1g01790.html - - - - PPDB 0.8145 0.9763 0.8906
ATTED:At1g01820.html HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 33 | 34 0.09 | 0.09 PPDB 0.0090 -0.0643 0.0942
ATTED:At1g01840.html HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 PPDB -0.4186 -0.1583 -0.1139
ATTED:At1g01860.html - - - - PPDB 0.3394 0.4576 0.2183
ATTED:At1g01900.html HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAT | ATATATA | TATATAT | ATATATA | TATATAT | ATATATA 46 | 47 | 48 | 49 | 113 | 236 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 PPDB 0.2122 0.3934 0.3961
ATTED:At1g01920.html HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:AAAACCC TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA | AAAACCC 4 | 23 | 73 | 74 | 83 | 84 | 85 | 405 0.07 | 0.09 | 0.09 | 0.06 | 0.07 | 0.08 | 0.09 | 0.09 PPDB -0.2857 -0.2824 -0.3563
ATTED:At1g01930.html HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 PPDB -0.3047 -0.2415 -0.2396
ATTED:At1g01940.html HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT 111 | 112 | 113 | 114 | 122 | 123 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 PPDB -0.1862 -0.0795 -0.0843
ATTED:At1g01950.html HeptamerElement:AAAATAT | HeptamerElement:CTCTCTT AAAATAT | CTCTCTT 20 | 169 0.07 | 0.06 PPDB 0.1483 -0.3224 -0.3339
ATTED:At1g01970.html HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC 104 | 120 | 121 | 122 | 123 | 138 | 139 | 140 | 160 | 161 0.06 | 0.07 | 0.10 | 0.10 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 PPDB 0.3668 0.5013 0.5175
ATTED:At1g01990.html HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT 37 | 61 | 62 | 63 | 74 | 123 | 124 0.06 | 0.07 | 0.10 | 0.09 | 0.06 | 0.06 | 0.06 PPDB -0.0223 -0.2038 -0.0855
ATTED:At1g02020.html HeptamerElement:TGCCGAC TGCCGAC 118 0.08 PPDB -0.0281 0.0167 0.1912
ATTED:At1g02050.html - - - - TAIR9 -0.4130 -0.5777 -0.2997
ATTED:At1g02060.html HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:AGGGTTT AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC | AGGGTTT 12 | 44 | 45 | 46 | 56 | 57 | 72 | 90 | 91 | 92 | 93 | 269 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 | 0.10 PPDB -0.1467 0.0616 -0.0626
ATTED:At1g02070.html HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 TAIR9 -0.3871 -0.2711 0.0091
ATTED:At1g02080.html HeptamerElement:AACCCTA AACCCTA 436 0.10 PPDB -0.3287 -0.2144 -0.0832
ATTED:At1g02090.html HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT | HeptamerElement:AGCCCAA ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT | AGCCCAA 26 | 50 | 64 | 65 | 84 | 85 | 139 | 140 | 492 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 PPDB -0.4471 -0.3738 -0.2980
ATTED:At1g02100.html HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG 138 | 139 | 158 | 159 | 160 0.07 | 0.08 | 0.10 | 0.10 | 0.08 PPDB -0.0132 0.0425 0.0944
ATTED:At1g02120.html HeptamerElement:GGCCCAA GGCCCAA 176 0.07 TAIR9 0.1158 0.4420 0.3726
ATTED:At1g02130.html HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC | TGGGCCT | TTGGGCC | ATTGGGC 52 | 53 | 54 | 79 | 80 | 81 | 190 | 191 | 192 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 | 0.09 | 0.08 | 0.08 PPDB -0.3480 -0.2180 -0.2002
ATTED:At1g02140.html HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA 64 | 65 | 66 | 67 | 78 | 79 | 112 | 113 | 198 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 PPDB -0.3538 -0.1540 -0.1752
ATTED:At1g02160.html HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC | HeptamerElement:AGGCCCA GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC | AGGCCCA 8 | 9 | 10 | 31 | 32 | 47 | 64 | 538 0.09 | 0.10 | 0.08 | 0.10 | 0.08 | 0.08 | 0.09 | 0.10 PPDB -0.1452 -0.1716 -0.1313
ATTED:At1g02180.html HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA 69 | 70 | 71 | 72 | 88 0.07 | 0.07 | 0.09 | 0.06 | 0.07 PPDB -0.1545 -0.1111 -0.2958
ATTED:At1g02190.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA TATATAA | CTATATA | TCTATAT | CTCTATA 28 | 29 | 30 | 31 0.11 | 0.13 | 0.10 | 0.10 PPDB -1.4677 -1.3774 -1.1716
ATTED:At1g02205.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA 34 | 35 | 46 | 47 | 70 0.11 | 0.13 | 0.07 | 0.08 | 0.06 PPDB -0.0287 0.2257 0.3306
ATTED:At1g02260.html HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC CGTGGCA | ACGTGGC 46 | 47 0.08 | 0.09 PPDB -0.0481 0.0189 0.0064
ATTED:At1g02270.html HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 126 | 127 0.09 | 0.09 PPDB 0.8720 0.2892 0.3228
ATTED:At1g02280.html HeptamerElement:GATAAGG GATAAGG 15 0.07 PPDB 0.4295 0.5756 0.3054
ATTED:At1g02310.html HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT | HeptamerElement:TATATAA | HeptamerElement:ATATATA CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT | TATATAA | ATATATA 25 | 34 | 35 | 36 | 131 | 541 | 542 0.06 | 0.11 | 0.10 | 0.10 | 0.10 | 0.11 | 0.10 PPDB -0.6640 -0.8264 -0.6645
ATTED:At1g02330.html HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT GGCCCAT | TGGGCTT | ATGGGCT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT 90 | 105 | 106 | 107 | 179 | 180 | 199 0.08 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 | 0.07 PPDB -0.4590 -0.3013 -0.1202
ATTED:At1g02340.html HeptamerElement:CCACACA CCACACA 114 0.06 PPDB -0.6819 0.3744 0.1024
ATTED:At1g02360.html HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT | HeptamerElement:TCTATAT TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT | TCTATAT 30 | 31 | 32 | 52 | 53 | 416 0.11 | 0.13 | 0.10 | 0.10 | 0.07 | 0.10 PPDB -0.0536 -0.2645 -0.0429
ATTED:At1g02370.html HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC AACCCTA | AAACCCT | TAAACCC | TTAAACC 31 | 32 | 33 | 34 0.11 | 0.12 | 0.08 | 0.06 PPDB -0.4939 -0.1502 -0.1777
ATTED:At1g02390.html HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC 28 | 71 | 122 | 172 | 173 | 180 0.11 | 0.07 | 0.07 | 0.10 | 0.06 | 0.07 PPDB -0.1079 -0.5907 -0.2278
ATTED:At1g02400.html HeptamerElement:AATAATT | HeptamerElement:AATAATT AATAATT | AATAATT 236 | 332 0.06 | 0.06 PPDB 1.2934 -1.2479 -1.1052
ATTED:At1g02410.html HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT | TGGGCTT | AATAATT | TGGGCTT 40 | 48 | 49 | 113 | 149 | 173 | 307 | 412 0.08 | 0.08 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 PPDB -0.0656 0.0148 -0.0742
ATTED:At1g02450.html HeptamerElement:AAATATC | HeptamerElement:AAATATC AAATATC | AAATATC 165 | 187 0.07 | 0.07 PPDB 0.3309 0.7385 0.9539
ATTED:At1g02460.html HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:AAGCCCA | HeptamerElement:GATATTT ATATAAA | TATATAA | ATATATA | TATATAT | AAGCCCA | GATATTT 47 | 48 | 49 | 50 | 68 | 126 0.08 | 0.10 | 0.09 | 0.10 | 0.09 | 0.09 TAIR9 0.0665 -0.0484 -0.0945
ATTED:At1g02470.html HeptamerElement:AAAGTCA AAAGTCA 164 0.07 TAIR9 -0.5878 -0.0522 -0.1661
ATTED:At1g02475.html - - - - PPDB 0.9791 1.0810 1.1862
* Row count is limited to 100.