AtGenExpress_PPDB_Flowering | This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_PPDB_Fruit_Seeds |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_PPDB_Leaf |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_PPDB_Root |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_PPDB_Seedling |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_PPDB_Stem |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_PPDB_Whole_Plant |
This collection of Gene Expression Properties are associated with whole plant body parts. |
We would like to thank Dr. Yoshiharu Yamamoto for supplying the data of PPDB (Plant Promoter Database) for PromoterCAD & GenoCon2 competition.
License of this work's data is according to the intentions of the PPDB original data source.
http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/license.cgi
value
#LINK | |||||||||||
#lang | en | ||||||||||
#attribution_name | GenoCon | ||||||||||
#attribution_url | http://promotercad.org | ||||||||||
#license | http://creativecommons.org/licenses/by-nc-nd/3.0/deed.en | ||||||||||
#file_name | AtGenExpress_PPDB_Root | ||||||||||
#download_from | http://linkdata.org/work/rdf1s782i | ||||||||||
#namespace | ATTED | http://atted.jp/data/locus/ | |||||||||
#namespace | Gene | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||
#namespace | OctamerElement | http://linkdata.org/work/rdf1s329i/Octamer_elements.html# | |||||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | |||||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | |||||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | |||||||||
#namespace | genome_version | http://www.arabidopsis.org/portals/genAnnotation/gene_structural_annotation/ | |||||||||
#property | PPDB motif | motif type | motif sequence | motif position | genome_version:annotation_data.jsp | label:Col-0_root17 | label:Col-0_root_MS1 | label:Col-0_root_GM-8 | label:Col-0_root_GM5-8 | label:Col-0_root_GM-21 | label:Col-0_root_GM5-21 |
#object_type_xsd | string | string | string | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
Gene:AT1G01010 | OctamerElement:AtREG514 | OctamerElement:AtREG519 | REG | TCGGTTTA | CGGTTTAC | 209.5 | 208.5 | TAIR9 | 1.2513 | 1.3319 | 1.5025 | 1.5946 | 1.6708 | 1.5874 | 1.6713 | 1.421 | 1.6035 | 1.5452 | 1.5575 | 1.5908 | 1.818 | 1.9751 | 1.6268 | 1.7606 | 1.6832 | 1.6171 |
Gene:AT1G01010 | OctamerElement:AtREG473 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | TTAAACCG | TAAACCGG | AAACCGGA | 129.5 | 128.5 | 127.5 | TAIR9 | 1.2513 | 1.3319 | 1.5025 | 1.5946 | 1.6708 | 1.5874 | 1.6713 | 1.421 | 1.6035 | 1.5452 | 1.5575 | 1.5908 | 1.818 | 1.9751 | 1.6268 | 1.7606 | 1.6832 | 1.6171 |
Gene:AT1G01010 | OctamerElement:AtREG626 | REG | AAACGCTG | 63.5 | TAIR9 | 1.2513 | 1.3319 | 1.5025 | 1.5946 | 1.6708 | 1.5874 | 1.6713 | 1.421 | 1.6035 | 1.5452 | 1.5575 | 1.5908 | 1.818 | 1.9751 | 1.6268 | 1.7606 | 1.6832 | 1.6171 |
Gene:AT1G01060 | OctamerElement:AtREG623 | REG | ATACCCTT | 130.5 | TAIR9 | -1.2963 | -1.3066 | -1.2806 | -0.9282 | -0.8396 | -0.8239 | -0.7228 | -0.865 | -0.9791 | -0.8484 | -0.7648 | -0.9222 | -0.826 | -0.6626 | -0.7601 | -0.7594 | -0.7938 | -0.6764 |
Gene:AT1G01060 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG382 | OctamerElement:AtREG544 | REG | ACGTGTCG | CACGTGTC | CCACGTGT | ACCACGTG | 167.5 | 168.5 | 169.5 | 170.5 | TAIR9 | -1.2963 | -1.3066 | -1.2806 | -0.9282 | -0.8396 | -0.8239 | -0.7228 | -0.865 | -0.9791 | -0.8484 | -0.7648 | -0.9222 | -0.826 | -0.6626 | -0.7601 | -0.7594 | -0.7938 | -0.6764 |
Gene:AT1G01070 | OctamerElement:AtREG462 | REG | GGGCTTAT | 68.5 | TAIR9 | 1.9279 | 2.0239 | 1.7728 | 1.89 | 1.6348 | 1.8378 | 1.1919 | 1.1564 | 0.6671 | 1.2574 | 1.238 | 1.4883 | 1.5641 | 1.2918 | 1.317 | 1.8837 | 1.8703 | 1.8455 |
Gene:AT1G01080 | OctamerElement:AtREG375 | OctamerElement:AtREG442 | OctamerElement:AtREG405 | OctamerElement:AtREG390 | OctamerElement:AtREG617 | REG | CCGACCCG | CCCGACCC | ACCCGACC | GACCCGAC | TGACCCGA | 43.5 | 44.5 | 45.5 | 46.5 | 47.5 | TAIR9 | -2.234 | -2.1348 | -2.4667 | -2.2981 | -1.8811 | -1.8353 | -2.0868 | -2.3146 | -2.1578 | -2.1308 | -1.8927 | -2.0869 | -2.1805 | -1.8893 | -2.1124 | -2.2557 | -2.054 | -2.1529 |
Gene:AT1G01080 | OctamerElement:AtREG459 | OctamerElement:AtREG359 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | REG | GGCCTTTT | GGGCCTTT | TGGGCCTT | TTGGGCCT | TTTGGGCC | 144.5 | 145.5 | 146.5 | 147.5 | 148.5 | TAIR9 | -2.234 | -2.1348 | -2.4667 | -2.2981 | -1.8811 | -1.8353 | -2.0868 | -2.3146 | -2.1578 | -2.1308 | -1.8927 | -2.0869 | -2.1805 | -1.8893 | -2.1124 | -2.2557 | -2.054 | -2.1529 |
Gene:AT1G01080 | OctamerElement:AtREG437 | OctamerElement:AtREG490 | OctamerElement:AtREG361 | OctamerElement:AtREG643 | REG | TGGGCCAT | ATGGGCCA | AATGGGCC | GAATGGGC | 285.5 | 286.5 | 287.5 | 288.5 | TAIR9 | -2.234 | -2.1348 | -2.4667 | -2.2981 | -1.8811 | -1.8353 | -2.0868 | -2.3146 | -2.1578 | -2.1308 | -1.8927 | -2.0869 | -2.1805 | -1.8893 | -2.1124 | -2.2557 | -2.054 | -2.1529 |
Gene:AT1G01090 | OctamerElement:AtREG523 | REG | GTGGGTCC | 90.5 | TAIR9 | 0.042 | 0.0642 | 0.1044 | 0.2346 | 0.1681 | 0.2136 | 0.045 | 0.1011 | 0.0474 | 0.0792 | 0.1699 | 0.2011 | -0.5317 | -0.4065 | -0.4599 | -0.6327 | -0.6592 | -0.5798 |
Gene:AT1G01100 | OctamerElement:AtREG635 | OctamerElement:AtREG403 | OctamerElement:AtREG380 | REG | GCCCATCA | GGCCCATC | CGGCCCAT | 59.5 | 60.5 | 61.5 | TAIR9 | 0.656 | 0.6686 | 0.7547 | 0.3898 | 0.3327 | 0.3993 | -0.1147 | 0.1635 | 0.0976 | 0.1641 | 0.0129 | 9e-04 | 0.1463 | 0.2366 | 0.1138 | 0.0035 | 0.1063 | 0.0801 |
Gene:AT1G01100 | OctamerElement:AtREG475 | OctamerElement:AtREG358 | OctamerElement:AtREG354 | OctamerElement:AtREG361 | OctamerElement:AtREG386 | REG | GGGCCTAG | TGGGCCTA | ATGGGCCT | AATGGGCC | AAATGGGC | 81.5 | 82.5 | 83.5 | 84.5 | 85.5 | TAIR9 | 0.656 | 0.6686 | 0.7547 | 0.3898 | 0.3327 | 0.3993 | -0.1147 | 0.1635 | 0.0976 | 0.1641 | 0.0129 | 9e-04 | 0.1463 | 0.2366 | 0.1138 | 0.0035 | 0.1063 | 0.0801 |
Gene:AT1G01100 | OctamerElement:AtREG355 | OctamerElement:AtREG352 | OctamerElement:AtREG356 | OctamerElement:AtREG353 | REG | GCCCAATA | GGCCCAAT | AGGCCCAA | AAGGCCCA | 120.5 | 121.5 | 122.5 | 123.5 | TAIR9 | 0.656 | 0.6686 | 0.7547 | 0.3898 | 0.3327 | 0.3993 | -0.1147 | 0.1635 | 0.0976 | 0.1641 | 0.0129 | 9e-04 | 0.1463 | 0.2366 | 0.1138 | 0.0035 | 0.1063 | 0.0801 |
Gene:AT1G01100 | OctamerElement:AtREG533 | OctamerElement:AtREG469 | OctamerElement:AtREG421 | REG | TTGGGCTC | TTTGGGCT | ATTTGGGC | 164.5 | 165.5 | 166.5 | TAIR9 | 0.656 | 0.6686 | 0.7547 | 0.3898 | 0.3327 | 0.3993 | -0.1147 | 0.1635 | 0.0976 | 0.1641 | 0.0129 | 9e-04 | 0.1463 | 0.2366 | 0.1138 | 0.0035 | 0.1063 | 0.0801 |
Gene:AT1G01100 | OctamerElement:AtREG632 | REG | AAAGTCAA | 182.5 | TAIR9 | 0.656 | 0.6686 | 0.7547 | 0.3898 | 0.3327 | 0.3993 | -0.1147 | 0.1635 | 0.0976 | 0.1641 | 0.0129 | 9e-04 | 0.1463 | 0.2366 | 0.1138 | 0.0035 | 0.1063 | 0.0801 |
Gene:AT1G01110 | OctamerElement:AtREG599 | REG | GGTGTCGT | 164.5 | TAIR9 | 0.1377 | 0.0846 | 0.4325 | -0.1838 | -0.2369 | -0.2507 | -0.1382 | -0.2103 | 0.0314 | -0.0286 | -0.2493 | -0.2957 | -0.6239 | -0.3991 | -0.5613 | -0.441 | -0.6547 | -0.5869 |
Gene:AT1G01120 | OctamerElement:AtREG620 | REG | CCCATATA | 168.5 | TAIR9 | -0.8181 | -0.7749 | -0.9009 | 0.6205 | 0.5956 | 0.5425 | 0.1602 | 0.2498 | 0.1884 | 0.6408 | 0.6439 | 0.5834 | 0.3803 | 0.2886 | 0.4065 | 0.199 | 0.4081 | 0.3472 |
Gene:AT1G01130 | OctamerElement:AtREG611 | OctamerElement:AtREG417 | OctamerElement:AtREG355 | REG | CCAATAAG | CCCAATAA | GCCCAATA | 83.5 | 84.5 | 85.5 | TAIR9 | -0.9145 | -0.6981 | -0.7068 | -0.7988 | -0.9311 | -0.581 | -1.1084 | -0.8156 | -0.6128 | -0.7073 | -1.0344 | -0.5296 | -1.0113 | -0.9594 | -1.2386 | -0.772 | -1.0405 | -1.094 |
Gene:AT1G01140 | OctamerElement:AtREG395 | REG | GCGCGTGA | 52.5 | TAIR9 | -3.4178 | -3.6456 | -3.7519 | -3.3455 | -3.1622 | -3.1388 | -4.1473 | -4.2394 | -4.1944 | -4.0463 | -3.694 | -3.8233 | -4.489 | -4.3919 | -4.3249 | -4.1161 | -4.2381 | -4.0853 |
Gene:AT1G01140 | OctamerElement:AtREG523 | OctamerElement:AtREG615 | REG | GGACCCAC | GGGACCCA | 65.5 | 66.5 | TAIR9 | -3.4178 | -3.6456 | -3.7519 | -3.3455 | -3.1622 | -3.1388 | -4.1473 | -4.2394 | -4.1944 | -4.0463 | -3.694 | -3.8233 | -4.489 | -4.3919 | -4.3249 | -4.1161 | -4.2381 | -4.0853 |
Gene:AT1G01140 | OctamerElement:AtREG448 | OctamerElement:AtREG379 | OctamerElement:AtREG413 | REG | CGTGGCAT | ACGTGGCA | TACGTGGC | 76.5 | 77.5 | 78.5 | TAIR9 | -3.4178 | -3.6456 | -3.7519 | -3.3455 | -3.1622 | -3.1388 | -4.1473 | -4.2394 | -4.1944 | -4.0463 | -3.694 | -3.8233 | -4.489 | -4.3919 | -4.3249 | -4.1161 | -4.2381 | -4.0853 |
Gene:AT1G01160 | OctamerElement:AtREG507 | OctamerElement:AtREG504 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG351 | OctamerElement:AtREG577 | REG | CCATGGGC | CATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTA | GGCCTTAG | 215.5 | 214.5 | 213.5 | 212.5 | 211.5 | 210.5 | TAIR9 | -0.282 | -0.1811 | -0.009 | 0.0081 | -0.0923 | -0.3061 | -0.3564 | -0.008 | -0.1464 | -0.451 | -0.2094 | -0.5141 | -0.1319 | -0.1686 | -0.1085 | -0.1614 | -0.3011 | -0.1414 |
Gene:AT1G01160 | OctamerElement:AtREG563 | OctamerElement:AtREG360 | OctamerElement:AtREG358 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | CTTAGGCC | TTAGGCCC | TAGGCCCA | AGGCCCAA | GGCCCAAA | GCCCAAAT | 196.5 | 195.5 | 194.5 | 193.5 | 192.5 | 191.5 | TAIR9 | -0.282 | -0.1811 | -0.009 | 0.0081 | -0.0923 | -0.3061 | -0.3564 | -0.008 | -0.1464 | -0.451 | -0.2094 | -0.5141 | -0.1319 | -0.1686 | -0.1085 | -0.1614 | -0.3011 | -0.1414 |
Gene:AT1G01160 | OctamerElement:AtREG446 | OctamerElement:AtREG484 | OctamerElement:AtREG420 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | ATTGGCCC | TTGGCCCA | TGGCCCAA | GGCCCAAA | GCCCAAAT | 168.5 | 167.5 | 166.5 | 165.5 | 164.5 | TAIR9 | -0.282 | -0.1811 | -0.009 | 0.0081 | -0.0923 | -0.3061 | -0.3564 | -0.008 | -0.1464 | -0.451 | -0.2094 | -0.5141 | -0.1319 | -0.1686 | -0.1085 | -0.1614 | -0.3011 | -0.1414 |
Gene:AT1G01170 | OctamerElement:AtREG386 | REG | GCCCATTT | 63.5 | TAIR9 | -2.3815 | -2.4412 | -2.6565 | -2.3034 | -2.3409 | -2.2923 | -2.0121 | -1.6806 | -1.4873 | -1.9616 | -2.0739 | -1.8555 | -0.8156 | -0.8082 | -0.8056 | -1.4228 | -1.5404 | -1.6728 |
Gene:AT1G01180 | OctamerElement:AtREG470 | OctamerElement:AtREG557 | OctamerElement:AtREG632 | REG | AGACACGT | GACACGTA | AAAGTCAA | 164.5 | 163.5 | 156.5 | TAIR9 | -0.028 | 0.0105 | -0.1353 | 0.0122 | -0.1178 | -0.0437 | -0.06 | -0.0783 | -0.0338 | 0.0035 | -0.0165 | 0.0768 | 0.3201 | -0.0373 | 0.0283 | -0.0554 | -0.0332 | -0.0125 |
Gene:AT1G01230 | OctamerElement:AtREG424 | REG | GGCCTATT | 101.5 | TAIR9 | 0.4629 | 0.4673 | 0.5167 | 0.8204 | 0.7241 | 0.6907 | 0.3724 | 0.4141 | 0.3993 | 0.5529 | 0.5261 | 0.5871 | 0.2552 | 0.2984 | 0.2546 | 0.2904 | 0.3414 | 0.2632 |
Gene:AT1G01240 | OctamerElement:AtREG590 | OctamerElement:AtREG590 | REG | AACACGTG | CACGTGTT | 133.5 | 131.5 | TAIR9 | -0.0747 | 0.0073 | -0.1694 | -0.3742 | -0.2693 | -0.3533 | -0.201 | -0.1787 | -0.1584 | -0.1861 | -0.5118 | -0.236 | 0.0874 | -0.0827 | 0.1543 | 0.0131 | 0.1612 | -0.0727 |
Gene:AT1G01240 | OctamerElement:AtREG527 | OctamerElement:AtREG569 | OctamerElement:AtREG520 | REG | GTGTCGTT | TGTCGTTT | GTCGTTTT | 72.5 | 71.5 | 70.5 | TAIR9 | -0.0747 | 0.0073 | -0.1694 | -0.3742 | -0.2693 | -0.3533 | -0.201 | -0.1787 | -0.1584 | -0.1861 | -0.5118 | -0.236 | 0.0874 | -0.0827 | 0.1543 | 0.0131 | 0.1612 | -0.0727 |
Gene:AT1G01260 | OctamerElement:AtREG636 | REG | TAAGGGGT | 171.5 | TAIR9 | -0.3216 | -0.3041 | -0.1791 | -0.3305 | -0.1822 | -0.3537 | -0.1461 | -0.0274 | -0.1408 | -0.3774 | -0.0865 | -0.2482 | 0.1771 | 0.053 | 0.0057 | -0.0051 | 0.1091 | -0.0319 |
Gene:AT1G01260 | OctamerElement:AtREG463 | OctamerElement:AtREG455 | OctamerElement:AtREG412 | OctamerElement:AtREG473 | REG | GACCCGGT | ACCCGGTT | CCGGTTTA | CGGTTTAA | 114.5 | 113.5 | 111.5 | 110.5 | TAIR9 | -0.3216 | -0.3041 | -0.1791 | -0.3305 | -0.1822 | -0.3537 | -0.1461 | -0.0274 | -0.1408 | -0.3774 | -0.0865 | -0.2482 | 0.1771 | 0.053 | 0.0057 | -0.0051 | 0.1091 | -0.0319 |
Gene:AT1G01320 | OctamerElement:AtREG411 | REG | AGAGGCCC | 144.5 | TAIR9 | -4.0242 | -3.8204 | -3.891 | -4.0941 | -3.8358 | -4.3385 | -2.7029 | -2.3358 | -2.7888 | -3.5906 | -3.4004 | -3.402 | -3.166 | -2.9256 | -3.0569 | -3.6747 | -3.6264 | -3.4136 |
Gene:AT1G01320 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG358 | OctamerElement:AtREG360 | OctamerElement:AtREG563 | REG | CCCATTAA | GCCCATTA | GGCCCATT | AGGCCCAT | TAGGCCCA | TTAGGCCC | CTTAGGCC | 159.5 | 160.5 | 161.5 | 162.5 | 163.5 | 164.5 | 165.5 | TAIR9 | -4.0242 | -3.8204 | -3.891 | -4.0941 | -3.8358 | -4.3385 | -2.7029 | -2.3358 | -2.7888 | -3.5906 | -3.4004 | -3.402 | -3.166 | -2.9256 | -3.0569 | -3.6747 | -3.6264 | -3.4136 |
Gene:AT1G01370 | OctamerElement:AtREG642 | REG | AGGGGTAA | 224.5 | TAIR9 | 0.2396 | 0.3349 | 0.4732 | -0.1483 | -0.2551 | -0.113 | -0.6586 | -0.7055 | -0.7794 | -0.6589 | -0.7352 | -0.5475 | -1.0615 | -1.0405 | -1.0451 | -0.7288 | -0.9576 | -1.0635 |
Gene:AT1G01430 | OctamerElement:AtREG608 | REG | AAGCCACG | 199.5 | TAIR9 | -0.1292 | -0.1349 | -0.0983 | -0.2203 | -0.1514 | -0.1005 | 0.1233 | -0.009 | -0.135 | 0.008 | 0.1459 | 0.0199 | -0.591 | -0.301 | -0.5436 | -0.7643 | -0.6955 | -0.8255 |
Gene:AT1G01470 | OctamerElement:AtREG638 | REG | GACCGACT | 65.5 | TAIR9 | 1.6597 | 1.6703 | 1.6032 | 1.4473 | 1.3095 | 1.2392 | 0.8789 | 1.18 | 1.3163 | 1.5135 | 1.4446 | 1.676 | 0.9146 | 1.0668 | 1.0887 | 1.0583 | 1.0551 | 1.1463 |
Gene:AT1G01470 | OctamerElement:AtREG588 | REG | TCACACGT | 108.5 | TAIR9 | 1.6597 | 1.6703 | 1.6032 | 1.4473 | 1.3095 | 1.2392 | 0.8789 | 1.18 | 1.3163 | 1.5135 | 1.4446 | 1.676 | 0.9146 | 1.0668 | 1.0887 | 1.0583 | 1.0551 | 1.1463 |
Gene:AT1G01470 | OctamerElement:AtREG557 | OctamerElement:AtREG470 | REG | GACACGTA | AGACACGT | 151.5 | 152.5 | TAIR9 | 1.6597 | 1.6703 | 1.6032 | 1.4473 | 1.3095 | 1.2392 | 0.8789 | 1.18 | 1.3163 | 1.5135 | 1.4446 | 1.676 | 0.9146 | 1.0668 | 1.0887 | 1.0583 | 1.0551 | 1.1463 |
Gene:AT1G01480 | OctamerElement:AtREG591 | REG | CCCATGGG | 74.5 | TAIR9 | 0.4735 | 0.3151 | 0.246 | 0.3352 | 0.4707 | 0.2557 | 0.1835 | 0.0637 | 0.0359 | -0.0783 | 0.2294 | 0.1273 | -0.477 | -0.4528 | -0.2979 | 0.0329 | -0.1368 | -0.2616 |
Gene:AT1G01490 | OctamerElement:AtREG395 | REG | TCACGCGC | 209.5 | TAIR9 | -0.9506 | -0.8795 | -0.8741 | 0.0982 | 0.2064 | 0.2195 | 0.0758 | 0.2764 | 0.4704 | 0.5738 | 0.3584 | 0.5532 | 0.4502 | 0.609 | 0.4481 | 0.3438 | 0.3707 | 0.3622 |
Gene:AT1G01490 | OctamerElement:AtREG486 | REG | CACGCGCC | 222.5 | TAIR9 | -0.9506 | -0.8795 | -0.8741 | 0.0982 | 0.2064 | 0.2195 | 0.0758 | 0.2764 | 0.4704 | 0.5738 | 0.3584 | 0.5532 | 0.4502 | 0.609 | 0.4481 | 0.3438 | 0.3707 | 0.3622 |
Gene:AT1G01500 | OctamerElement:AtREG426 | OctamerElement:AtREG378 | OctamerElement:AtREG372 | OctamerElement:AtREG386 | OctamerElement:AtREG443 | OctamerElement:AtREG610 | REG | TAAGCCCA | AAGCCCAT | AGCCCATT | GCCCATTT | CCCATTTA | TTTAACGG | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | 213.5 | TAIR9 | -0.7646 | -0.7231 | -0.603 | -0.1854 | -0.1548 | -0.2405 | -0.0883 | -0.3185 | -0.2224 | -0.2339 | -0.376 | -0.4484 | -0.1556 | -0.2922 | -0.0644 | -0.4082 | -0.3092 | -0.2729 |
Gene:AT1G01500 | OctamerElement:AtREG437 | OctamerElement:AtREG458 | OctamerElement:AtREG384 | REG | ATGGCCCA | TGGCCCAG | GGCCCAGT | 191.5 | 190.5 | 189.5 | TAIR9 | -0.7646 | -0.7231 | -0.603 | -0.1854 | -0.1548 | -0.2405 | -0.0883 | -0.3185 | -0.2224 | -0.2339 | -0.376 | -0.4484 | -0.1556 | -0.2922 | -0.0644 | -0.4082 | -0.3092 | -0.2729 |
Gene:AT1G01500 | OctamerElement:AtREG589 | REG | AAAAAGCC | 156.5 | TAIR9 | -0.7646 | -0.7231 | -0.603 | -0.1854 | -0.1548 | -0.2405 | -0.0883 | -0.3185 | -0.2224 | -0.2339 | -0.376 | -0.4484 | -0.1556 | -0.2922 | -0.0644 | -0.4082 | -0.3092 | -0.2729 |
Gene:AT1G01500 | OctamerElement:AtREG588 | OctamerElement:AtREG460 | OctamerElement:AtREG541 | REG | TCACACGT | CACACGTG | CACGTGCG | 137.5 | 136.5 | 134.5 | TAIR9 | -0.7646 | -0.7231 | -0.603 | -0.1854 | -0.1548 | -0.2405 | -0.0883 | -0.3185 | -0.2224 | -0.2339 | -0.376 | -0.4484 | -0.1556 | -0.2922 | -0.0644 | -0.4082 | -0.3092 | -0.2729 |
Gene:AT1G01500 | OctamerElement:AtREG567 | OctamerElement:AtREG602 | REG | AGGGTATT | GGGTATTT | 110.5 | 109.5 | TAIR9 | -0.7646 | -0.7231 | -0.603 | -0.1854 | -0.1548 | -0.2405 | -0.0883 | -0.3185 | -0.2224 | -0.2339 | -0.376 | -0.4484 | -0.1556 | -0.2922 | -0.0644 | -0.4082 | -0.3092 | -0.2729 |
Gene:AT1G01500 | OctamerElement:AtREG592 | REG | TTTGACCC | 80.5 | TAIR9 | -0.7646 | -0.7231 | -0.603 | -0.1854 | -0.1548 | -0.2405 | -0.0883 | -0.3185 | -0.2224 | -0.2339 | -0.376 | -0.4484 | -0.1556 | -0.2922 | -0.0644 | -0.4082 | -0.3092 | -0.2729 |
Gene:AT1G01500 | OctamerElement:AtREG646 | REG | CGTAATTA | 69.5 | TAIR9 | -0.7646 | -0.7231 | -0.603 | -0.1854 | -0.1548 | -0.2405 | -0.0883 | -0.3185 | -0.2224 | -0.2339 | -0.376 | -0.4484 | -0.1556 | -0.2922 | -0.0644 | -0.4082 | -0.3092 | -0.2729 |
Gene:AT1G01510 | OctamerElement:AtREG540 | OctamerElement:AtREG537 | OctamerElement:AtREG439 | OctamerElement:AtREG415 | OctamerElement:AtREG565 | REG | ACGGCGTC | GGCGTCGT | GCGTCGTT | CGTCGTTT | GTCGTTTA | 208.5 | 206.5 | 205.5 | 204.5 | 203.5 | TAIR9 | 0.5324 | 0.5975 | 0.4719 | 0.141 | 0.0643 | 0.007 | 0.3601 | 0.3192 | 0.2921 | 0.1264 | 0.0702 | 0.1626 | 0.2339 | 0.1564 | 0.1006 | -0.0015 | 0.0298 | 0.0881 |
Gene:AT1G01510 | OctamerElement:AtREG578 | REG | GATGACGT | 179.5 | TAIR9 | 0.5324 | 0.5975 | 0.4719 | 0.141 | 0.0643 | 0.007 | 0.3601 | 0.3192 | 0.2921 | 0.1264 | 0.0702 | 0.1626 | 0.2339 | 0.1564 | 0.1006 | -0.0015 | 0.0298 | 0.0881 |
Gene:AT1G01510 | OctamerElement:AtREG529 | OctamerElement:AtREG373 | OctamerElement:AtREG392 | OctamerElement:AtREG400 | REG | TTTTGGGC | TTTGGGCC | TTGGGCCC | TGGGCCCT | 112.5 | 111.5 | 110.5 | 109.5 | TAIR9 | 0.5324 | 0.5975 | 0.4719 | 0.141 | 0.0643 | 0.007 | 0.3601 | 0.3192 | 0.2921 | 0.1264 | 0.0702 | 0.1626 | 0.2339 | 0.1564 | 0.1006 | -0.0015 | 0.0298 | 0.0881 |
Gene:AT1G01540 | OctamerElement:AtREG630 | REG | CGACATCG | 155.5 | TAIR9 | -0.5807 | -0.4733 | -0.4359 | -0.802 | -0.4714 | -0.7322 | -0.6083 | -0.706 | -0.6992 | -0.6966 | -0.6696 | -0.6578 | -0.9093 | -0.7048 | -0.6516 | -0.6839 | -0.7544 | -0.8777 |
Gene:AT1G01550 | OctamerElement:AtREG632 | REG | TTGACTTT | 194.5 | TAIR9 | 0.5447 | 0.5515 | 0.5252 | 0.381 | 0.2385 | 0.2707 | 0.4327 | 0.3944 | 0.2763 | 0.0269 | 0.3268 | 0.0581 | 0.9004 | 0.9395 | 0.8441 | 0.8767 | 0.7987 | 0.7751 |
Gene:AT1G01560 | OctamerElement:AtREG507 | REG | CCATGGGC | 203.5 | TAIR9 | -1.032 | -0.8203 | -0.7703 | -0.4136 | -0.386 | -0.486 | -1.6239 | -1.634 | -1.5202 | -1.2193 | -1.2869 | -1.051 | -0.9728 | -0.8295 | -1.3818 | -0.7516 | -1.0063 | -1.1905 |
Gene:AT1G01620 | OctamerElement:AtREG553 | OctamerElement:AtREG554 | REG | CAACGGTC | TCCAACGG | 444.5 | 446.5 | TAIR9 | 1.4812 | 1.3972 | 1.4047 | 0.7413 | 0.6191 | 0.85 | 1.0998 | 1.2144 | 1.1772 | 0.7771 | 0.8325 | 0.7564 | 1.0206 | 1.1032 | 1.0181 | 0.5285 | 0.5528 | 0.5046 |
Gene:AT1G01620 | OctamerElement:AtREG475 | REG | CTAGGCCC | 525.5 | TAIR9 | 1.4812 | 1.3972 | 1.4047 | 0.7413 | 0.6191 | 0.85 | 1.0998 | 1.2144 | 1.1772 | 0.7771 | 0.8325 | 0.7564 | 1.0206 | 1.1032 | 1.0181 | 0.5285 | 0.5528 | 0.5046 |
Gene:AT1G01630 | OctamerElement:AtREG440 | OctamerElement:AtREG419 | OctamerElement:AtREG485 | REG | CTGACGTG | TGACGTGG | TGGGCTCA | 208.5 | 207.5 | 202.5 | TAIR9 | 0.0471 | 0.0861 | 0.0205 | 0.5458 | 0.5739 | 0.5733 | 0.215 | 0.3462 | 0.3477 | 0.5012 | 0.5235 | 0.6105 | 0.0811 | 0.2097 | 0.1147 | 0.18 | 0.1869 | 0.1968 |
Gene:AT1G01630 | OctamerElement:AtREG531 | REG | AAAACGGC | 187.5 | TAIR9 | 0.0471 | 0.0861 | 0.0205 | 0.5458 | 0.5739 | 0.5733 | 0.215 | 0.3462 | 0.3477 | 0.5012 | 0.5235 | 0.6105 | 0.0811 | 0.2097 | 0.1147 | 0.18 | 0.1869 | 0.1968 |
Gene:AT1G01630 | OctamerElement:AtREG533 | OctamerElement:AtREG402 | OctamerElement:AtREG355 | OctamerElement:AtREG624 | REG | GAGCCCAA | AGCCCAAT | GCCCAATA | CCCAATAG | 104.5 | 103.5 | 102.5 | 101.5 | TAIR9 | 0.0471 | 0.0861 | 0.0205 | 0.5458 | 0.5739 | 0.5733 | 0.215 | 0.3462 | 0.3477 | 0.5012 | 0.5235 | 0.6105 | 0.0811 | 0.2097 | 0.1147 | 0.18 | 0.1869 | 0.1968 |
Gene:AT1G01630 | OctamerElement:AtREG425 | OctamerElement:AtREG351 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG352 | OctamerElement:AtREG355 | REG | ATAAGGCC | TAAGGCCC | AAGGCCCA | AGGCCCAA | GGCCCAAT | GCCCAATA | 87.5 | 86.5 | 85.5 | 84.5 | 83.5 | 82.5 | TAIR9 | 0.0471 | 0.0861 | 0.0205 | 0.5458 | 0.5739 | 0.5733 | 0.215 | 0.3462 | 0.3477 | 0.5012 | 0.5235 | 0.6105 | 0.0811 | 0.2097 | 0.1147 | 0.18 | 0.1869 | 0.1968 |
Gene:AT1G01650 | OctamerElement:AtREG564 | OctamerElement:AtREG626 | REG | GCGTTTTA | CAGCGTTT | 1082.5 | 1084.5 | TAIR9 | 0.2016 | 0.1495 | 0.2672 | -0.3431 | -0.2207 | -0.4142 | -0.1995 | -0.2113 | -0.2656 | -0.3288 | -0.3064 | -0.3736 | -0.1966 | -0.041 | -0.1002 | -0.2827 | -0.2975 | -0.2303 |
Gene:AT1G01650 | OctamerElement:AtREG632 | REG | AAAGTCAA | 1095.5 | TAIR9 | 0.2016 | 0.1495 | 0.2672 | -0.3431 | -0.2207 | -0.4142 | -0.1995 | -0.2113 | -0.2656 | -0.3288 | -0.3064 | -0.3736 | -0.1966 | -0.041 | -0.1002 | -0.2827 | -0.2975 | -0.2303 |
Gene:AT1G01650 | OctamerElement:AtREG486 | REG | CACGCGCC | 1129.5 | TAIR9 | 0.2016 | 0.1495 | 0.2672 | -0.3431 | -0.2207 | -0.4142 | -0.1995 | -0.2113 | -0.2656 | -0.3288 | -0.3064 | -0.3736 | -0.1966 | -0.041 | -0.1002 | -0.2827 | -0.2975 | -0.2303 |
Gene:AT1G01650 | OctamerElement:AtREG536 | REG | ACACGCGT | 1139.5 | TAIR9 | 0.2016 | 0.1495 | 0.2672 | -0.3431 | -0.2207 | -0.4142 | -0.1995 | -0.2113 | -0.2656 | -0.3288 | -0.3064 | -0.3736 | -0.1966 | -0.041 | -0.1002 | -0.2827 | -0.2975 | -0.2303 |
Gene:AT1G01650 | OctamerElement:AtREG449 | OctamerElement:AtREG420 | OctamerElement:AtREG484 | REG | GGCCCAAC | TGGCCCAA | TTGGCCCA | 182.5 | 183.5 | 184.5 | TAIR9 | 0.2016 | 0.1495 | 0.2672 | -0.3431 | -0.2207 | -0.4142 | -0.1995 | -0.2113 | -0.2656 | -0.3288 | -0.3064 | -0.3736 | -0.1966 | -0.041 | -0.1002 | -0.2827 | -0.2975 | -0.2303 |
Gene:AT1G01670 | OctamerElement:AtREG428 | OctamerElement:AtREG478 | OctamerElement:AtREG481 | OctamerElement:AtREG517 | OctamerElement:AtREG466 | OctamerElement:AtREG489 | REG | CGTGTCGT | ACGTGTCG | GACGTGTC | TGACGTGT | GTGACGTG | CGTGACGT | 62.5 | 63.5 | 64.5 | 65.5 | 66.5 | 67.5 | TAIR9 | 0.0953 | 0.3723 | 0.1749 | 0.0125 | -0.243 | 0.0235 | -0.13 | -0.1724 | -0.0167 | -0.0871 | -0.146 | -0.0824 | 0.2077 | 0.3162 | 0.2095 | 0.2219 | 0.0954 | 0.2982 |
Gene:AT1G01690 | OctamerElement:AtREG417 | REG | TTATTGGG | 188.5 | TAIR9 | -0.0598 | -0.2636 | -0.375 | -0.1368 | -0.1506 | -0.0874 | -0.2447 | -0.2249 | -0.3051 | -0.2127 | -0.2852 | -0.1245 | -0.2285 | -0.1286 | -0.1522 | -0.0251 | -0.1456 | 0.0488 |
Gene:AT1G01690 | OctamerElement:AtREG364 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | TATGGGCC | ATGGGCCA | TGGGCCAT | 169.5 | 168.5 | 167.5 | TAIR9 | -0.0598 | -0.2636 | -0.375 | -0.1368 | -0.1506 | -0.0874 | -0.2447 | -0.2249 | -0.3051 | -0.2127 | -0.2852 | -0.1245 | -0.2285 | -0.1286 | -0.1522 | -0.0251 | -0.1456 | 0.0488 |
Gene:AT1G01690 | OctamerElement:AtREG558 | OctamerElement:AtREG357 | OctamerElement:AtREG372 | OctamerElement:AtREG378 | OctamerElement:AtREG376 | OctamerElement:AtREG365 | OctamerElement:AtREG601 | OctamerElement:AtREG394 | OctamerElement:AtREG364 | OctamerElement:AtREG354 | OctamerElement:AtREG447 | OctamerElement:AtREG411 | REG | CTAATGGG | TAATGGGC | AATGGGCT | ATGGGCTT | TGGGCTTT | GGGCTTTA | GGCTTTAT | TTATGGGC | TATGGGCC | ATGGGCCT | TGGGCCTC | GGGCCTCT | 149.5 | 148.5 | 147.5 | 146.5 | 145.5 | 144.5 | 143.5 | 139.5 | 138.5 | 137.5 | 136.5 | 135.5 | TAIR9 | -0.0598 | -0.2636 | -0.375 | -0.1368 | -0.1506 | -0.0874 | -0.2447 | -0.2249 | -0.3051 | -0.2127 | -0.2852 | -0.1245 | -0.2285 | -0.1286 | -0.1522 | -0.0251 | -0.1456 | 0.0488 |
Gene:AT1G01710 | OctamerElement:AtREG504 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | CATGGGCC | ATGGGCCA | TGGGCCAT | 277.5 | 276.5 | 275.5 | TAIR9 | -0.6597 | -0.5658 | -0.5355 | -0.5743 | -0.5154 | -0.6102 | -0.5061 | -0.4528 | -0.3695 | -0.163 | -0.2869 | -0.3487 | -0.3436 | -0.2043 | -0.149 | -0.1072 | -0.1748 | -0.3206 |
Gene:AT1G01710 | OctamerElement:AtREG416 | OctamerElement:AtREG416 | OctamerElement:AtREG545 | REG | TTAAGGCC | GGCCTTAA | TTAAAGCC | 239.5 | 235.5 | 231.5 | TAIR9 | -0.6597 | -0.5658 | -0.5355 | -0.5743 | -0.5154 | -0.6102 | -0.5061 | -0.4528 | -0.3695 | -0.163 | -0.2869 | -0.3487 | -0.3436 | -0.2043 | -0.149 | -0.1072 | -0.1748 | -0.3206 |
Gene:AT1G01710 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG398 | REG | TTAATGGG | TAATGGGC | AATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTG | 222.5 | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | TAIR9 | -0.6597 | -0.5658 | -0.5355 | -0.5743 | -0.5154 | -0.6102 | -0.5061 | -0.4528 | -0.3695 | -0.163 | -0.2869 | -0.3487 | -0.3436 | -0.2043 | -0.149 | -0.1072 | -0.1748 | -0.3206 |
Gene:AT1G01710 | OctamerElement:AtREG590 | OctamerElement:AtREG628 | REG | AACACGTG | ACACGTGA | 93.5 | 92.5 | TAIR9 | -0.6597 | -0.5658 | -0.5355 | -0.5743 | -0.5154 | -0.6102 | -0.5061 | -0.4528 | -0.3695 | -0.163 | -0.2869 | -0.3487 | -0.3436 | -0.2043 | -0.149 | -0.1072 | -0.1748 | -0.3206 |
Gene:AT1G01710 | OctamerElement:AtREG575 | REG | CGAACCGA | 71.5 | TAIR9 | -0.6597 | -0.5658 | -0.5355 | -0.5743 | -0.5154 | -0.6102 | -0.5061 | -0.4528 | -0.3695 | -0.163 | -0.2869 | -0.3487 | -0.3436 | -0.2043 | -0.149 | -0.1072 | -0.1748 | -0.3206 |
Gene:AT1G01710 | OctamerElement:AtREG513 | REG | GTCCACGT | 63.5 | TAIR9 | -0.6597 | -0.5658 | -0.5355 | -0.5743 | -0.5154 | -0.6102 | -0.5061 | -0.4528 | -0.3695 | -0.163 | -0.2869 | -0.3487 | -0.3436 | -0.2043 | -0.149 | -0.1072 | -0.1748 | -0.3206 |
Gene:AT1G01710 | OctamerElement:AtREG598 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | ATAAACCG | TAAACCGG | AAACCGGA | 47.5 | 46.5 | 45.5 | TAIR9 | -0.6597 | -0.5658 | -0.5355 | -0.5743 | -0.5154 | -0.6102 | -0.5061 | -0.4528 | -0.3695 | -0.163 | -0.2869 | -0.3487 | -0.3436 | -0.2043 | -0.149 | -0.1072 | -0.1748 | -0.3206 |
Gene:AT1G01720 | OctamerElement:AtREG644 | REG | ACCGGAAA | 280.5 | TAIR9 | 1.0091 | 1.3101 | 1.2071 | 0.2424 | 0.2888 | 0.3029 | 0.7288 | 0.6394 | 0.4771 | 0.235 | 0.4773 | 0.1872 | 0.7328 | 0.7119 | 1.018 | 1.1954 | 1.1678 | 1.2687 |
Gene:AT1G01720 | OctamerElement:AtREG451 | REG | GGTTCGGT | 242.5 | TAIR9 | 1.0091 | 1.3101 | 1.2071 | 0.2424 | 0.2888 | 0.3029 | 0.7288 | 0.6394 | 0.4771 | 0.235 | 0.4773 | 0.1872 | 0.7328 | 0.7119 | 1.018 | 1.1954 | 1.1678 | 1.2687 |
Gene:AT1G01720 | OctamerElement:AtREG576 | OctamerElement:AtREG569 | REG | GAAACGAC | AAACGACA | 183.5 | 182.5 | TAIR9 | 1.0091 | 1.3101 | 1.2071 | 0.2424 | 0.2888 | 0.3029 | 0.7288 | 0.6394 | 0.4771 | 0.235 | 0.4773 | 0.1872 | 0.7328 | 0.7119 | 1.018 | 1.1954 | 1.1678 | 1.2687 |
Gene:AT1G01720 | OctamerElement:AtREG471 | OctamerElement:AtREG371 | OctamerElement:AtREG388 | OctamerElement:AtREG419 | OctamerElement:AtREG440 | OctamerElement:AtREG515 | REG | TCGCCACG | CGCCACGT | GCCACGTC | CCACGTCA | CACGTCAG | ACGTCAGC | 146.5 | 145.5 | 144.5 | 143.5 | 142.5 | 141.5 | TAIR9 | 1.0091 | 1.3101 | 1.2071 | 0.2424 | 0.2888 | 0.3029 | 0.7288 | 0.6394 | 0.4771 | 0.235 | 0.4773 | 0.1872 | 0.7328 | 0.7119 | 1.018 | 1.1954 | 1.1678 | 1.2687 |
Gene:AT1G01720 | OctamerElement:AtREG472 | REG | ACGTGTCC | 113.5 | TAIR9 | 1.0091 | 1.3101 | 1.2071 | 0.2424 | 0.2888 | 0.3029 | 0.7288 | 0.6394 | 0.4771 | 0.235 | 0.4773 | 0.1872 | 0.7328 | 0.7119 | 1.018 | 1.1954 | 1.1678 | 1.2687 |
Gene:AT1G01720 | OctamerElement:AtREG464 | OctamerElement:AtREG382 | OctamerElement:AtREG460 | REG | CCCACGTG | CCACGTGT | CACGTGTG | 90.5 | 89.5 | 88.5 | TAIR9 | 1.0091 | 1.3101 | 1.2071 | 0.2424 | 0.2888 | 0.3029 | 0.7288 | 0.6394 | 0.4771 | 0.235 | 0.4773 | 0.1872 | 0.7328 | 0.7119 | 1.018 | 1.1954 | 1.1678 | 1.2687 |
Gene:AT1G01720 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG366 | OctamerElement:AtREG472 | REG | CGACACGT | GACACGTG | CACGTGTC | ACGTGTCC | 50.5 | 49.5 | 47.5 | 46.5 | TAIR9 | 1.0091 | 1.3101 | 1.2071 | 0.2424 | 0.2888 | 0.3029 | 0.7288 | 0.6394 | 0.4771 | 0.235 | 0.4773 | 0.1872 | 0.7328 | 0.7119 | 1.018 | 1.1954 | 1.1678 | 1.2687 |