AtGenExpress_PPDB_Flowering | This collection of Gene Expression Properties are associated with flowering tissues. |
AtGenExpress_PPDB_Fruit_Seeds |
This collection of Gene Expression Properties are associated with fruit and seed tissues. |
AtGenExpress_PPDB_Leaf |
This collection of Gene Expression Properties are associated with leaf tissues. |
AtGenExpress_PPDB_Root |
This collection of Gene Expression Properties are associated with root tissues. |
AtGenExpress_PPDB_Seedling |
This collection of Gene Expression Properties are associated with seedling tissues. |
AtGenExpress_PPDB_Stem |
This collection of Gene Expression Properties are associated with stem tissues. |
AtGenExpress_PPDB_Whole_Plant |
This collection of Gene Expression Properties are associated with whole plant body parts. |
We would like to thank Dr. Yoshiharu Yamamoto for supplying the data of PPDB (Plant Promoter Database) for PromoterCAD & GenoCon2 competition.
License of this work's data is according to the intentions of the PPDB original data source.
http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/license.cgi
value
#LINK | ||||||||
#lang | en | |||||||
#attribution_name | GenoCon | |||||||
#attribution_url | http://promotercad.org | |||||||
#license | http://creativecommons.org/licenses/by-nc-nd/3.0/deed.en | |||||||
#file_name | AtGenExpress_PPDB_Stem | |||||||
#download_from | http://linkdata.org/work/rdf1s782i | |||||||
#namespace | ATTED | http://atted.jp/data/locus/ | ||||||
#namespace | Gene | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | ||||||
#namespace | OctamerElement | http://linkdata.org/work/rdf1s329i/Octamer_elements.html# | ||||||
#namespace | PLACE | http://www.dna.affrc.go.jp/sigscan/disp.cgi? | ||||||
#namespace | PPDB | http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene= | ||||||
#namespace | TAIR | http://arabidopsis.org/servlets/TairObject?type=locus&name= | ||||||
#namespace | genome_version | http://www.arabidopsis.org/portals/genAnnotation/gene_structural_annotation/ | ||||||
#property | PPDB motif | motif type | motif sequence | motif position | genome_version:annotation_data.jsp | label:Col-0_lf7_petio | label:Col-0_stem_2nd | label:Col-0_stem_1st |
#object_type_xsd | string | string | string | string | string | string | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
Gene:AT1G01010 | OctamerElement:AtREG514 | OctamerElement:AtREG519 | REG | TCGGTTTA | CGGTTTAC | 209.5 | 208.5 | TAIR9 | -0.2004 | -0.4973 | -0.2962 | -0.0864 | 0.0193 | 0.0011 | -0.1248 | -0.0167 | -0.1142 |
Gene:AT1G01010 | OctamerElement:AtREG473 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | TTAAACCG | TAAACCGG | AAACCGGA | 129.5 | 128.5 | 127.5 | TAIR9 | -0.2004 | -0.4973 | -0.2962 | -0.0864 | 0.0193 | 0.0011 | -0.1248 | -0.0167 | -0.1142 |
Gene:AT1G01010 | OctamerElement:AtREG626 | REG | AAACGCTG | 63.5 | TAIR9 | -0.2004 | -0.4973 | -0.2962 | -0.0864 | 0.0193 | 0.0011 | -0.1248 | -0.0167 | -0.1142 |
Gene:AT1G01060 | OctamerElement:AtREG623 | REG | ATACCCTT | 130.5 | TAIR9 | -0.541 | -0.5574 | -0.6509 | 1.5826 | 1.699 | 1.6486 | -0.3161 | -0.3113 | -0.3669 |
Gene:AT1G01060 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG382 | OctamerElement:AtREG544 | REG | ACGTGTCG | CACGTGTC | CCACGTGT | ACCACGTG | 167.5 | 168.5 | 169.5 | 170.5 | TAIR9 | -0.541 | -0.5574 | -0.6509 | 1.5826 | 1.699 | 1.6486 | -0.3161 | -0.3113 | -0.3669 |
Gene:AT1G01070 | OctamerElement:AtREG462 | REG | GGGCTTAT | 68.5 | TAIR9 | 0.5741 | 0.9806 | 0.8701 | 1.7056 | 1.35 | 1.1232 | 2.2048 | 2.0998 | 2.1661 |
Gene:AT1G01080 | OctamerElement:AtREG375 | OctamerElement:AtREG442 | OctamerElement:AtREG405 | OctamerElement:AtREG390 | OctamerElement:AtREG617 | REG | CCGACCCG | CCCGACCC | ACCCGACC | GACCCGAC | TGACCCGA | 43.5 | 44.5 | 45.5 | 46.5 | 47.5 | TAIR9 | 0.8633 | 1.1913 | 1.2621 | -0.719 | -0.7622 | -0.564 | -0.4777 | -0.447 | -0.4642 |
Gene:AT1G01080 | OctamerElement:AtREG459 | OctamerElement:AtREG359 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | REG | GGCCTTTT | GGGCCTTT | TGGGCCTT | TTGGGCCT | TTTGGGCC | 144.5 | 145.5 | 146.5 | 147.5 | 148.5 | TAIR9 | 0.8633 | 1.1913 | 1.2621 | -0.719 | -0.7622 | -0.564 | -0.4777 | -0.447 | -0.4642 |
Gene:AT1G01080 | OctamerElement:AtREG437 | OctamerElement:AtREG490 | OctamerElement:AtREG361 | OctamerElement:AtREG643 | REG | TGGGCCAT | ATGGGCCA | AATGGGCC | GAATGGGC | 285.5 | 286.5 | 287.5 | 288.5 | TAIR9 | 0.8633 | 1.1913 | 1.2621 | -0.719 | -0.7622 | -0.564 | -0.4777 | -0.447 | -0.4642 |
Gene:AT1G01090 | OctamerElement:AtREG523 | REG | GTGGGTCC | 90.5 | TAIR9 | -0.0344 | -0.0139 | 0.0513 | -0.6197 | -0.6486 | -0.6188 | -0.3381 | -0.5289 | -0.4401 |
Gene:AT1G01100 | OctamerElement:AtREG635 | OctamerElement:AtREG403 | OctamerElement:AtREG380 | REG | GCCCATCA | GGCCCATC | CGGCCCAT | 59.5 | 60.5 | 61.5 | TAIR9 | -0.1717 | -0.0486 | -0.0983 | -0.9575 | -1.1532 | -1.0168 | -0.2131 | -0.3685 | -0.3206 |
Gene:AT1G01100 | OctamerElement:AtREG475 | OctamerElement:AtREG358 | OctamerElement:AtREG354 | OctamerElement:AtREG361 | OctamerElement:AtREG386 | REG | GGGCCTAG | TGGGCCTA | ATGGGCCT | AATGGGCC | AAATGGGC | 81.5 | 82.5 | 83.5 | 84.5 | 85.5 | TAIR9 | -0.1717 | -0.0486 | -0.0983 | -0.9575 | -1.1532 | -1.0168 | -0.2131 | -0.3685 | -0.3206 |
Gene:AT1G01100 | OctamerElement:AtREG355 | OctamerElement:AtREG352 | OctamerElement:AtREG356 | OctamerElement:AtREG353 | REG | GCCCAATA | GGCCCAAT | AGGCCCAA | AAGGCCCA | 120.5 | 121.5 | 122.5 | 123.5 | TAIR9 | -0.1717 | -0.0486 | -0.0983 | -0.9575 | -1.1532 | -1.0168 | -0.2131 | -0.3685 | -0.3206 |
Gene:AT1G01100 | OctamerElement:AtREG533 | OctamerElement:AtREG469 | OctamerElement:AtREG421 | REG | TTGGGCTC | TTTGGGCT | ATTTGGGC | 164.5 | 165.5 | 166.5 | TAIR9 | -0.1717 | -0.0486 | -0.0983 | -0.9575 | -1.1532 | -1.0168 | -0.2131 | -0.3685 | -0.3206 |
Gene:AT1G01100 | OctamerElement:AtREG632 | REG | AAAGTCAA | 182.5 | TAIR9 | -0.1717 | -0.0486 | -0.0983 | -0.9575 | -1.1532 | -1.0168 | -0.2131 | -0.3685 | -0.3206 |
Gene:AT1G01110 | OctamerElement:AtREG599 | REG | GGTGTCGT | 164.5 | TAIR9 | 0.1781 | 0.0935 | 0.1471 | -0.2402 | -0.1759 | 0.0343 | 0.038 | -0.0845 | -0.1908 |
Gene:AT1G01120 | OctamerElement:AtREG620 | REG | CCCATATA | 168.5 | TAIR9 | -0.2239 | -0.2782 | -0.2633 | 1.2037 | 1.1518 | 1.2786 | 0.3628 | 0.3238 | 0.4321 |
Gene:AT1G01130 | OctamerElement:AtREG611 | OctamerElement:AtREG417 | OctamerElement:AtREG355 | REG | CCAATAAG | CCCAATAA | GCCCAATA | 83.5 | 84.5 | 85.5 | TAIR9 | -0.5263 | -0.2453 | -0.4628 | -0.2031 | 0.051 | 0.0156 | 0.185 | 0.0237 | 0.0964 |
Gene:AT1G01140 | OctamerElement:AtREG395 | REG | GCGCGTGA | 52.5 | TAIR9 | 0.1685 | 0.2073 | 0.1882 | 0.1096 | 0.0895 | 0.1478 | 0.1301 | -0.0971 | 0.1103 |
Gene:AT1G01140 | OctamerElement:AtREG523 | OctamerElement:AtREG615 | REG | GGACCCAC | GGGACCCA | 65.5 | 66.5 | TAIR9 | 0.1685 | 0.2073 | 0.1882 | 0.1096 | 0.0895 | 0.1478 | 0.1301 | -0.0971 | 0.1103 |
Gene:AT1G01140 | OctamerElement:AtREG448 | OctamerElement:AtREG379 | OctamerElement:AtREG413 | REG | CGTGGCAT | ACGTGGCA | TACGTGGC | 76.5 | 77.5 | 78.5 | TAIR9 | 0.1685 | 0.2073 | 0.1882 | 0.1096 | 0.0895 | 0.1478 | 0.1301 | -0.0971 | 0.1103 |
Gene:AT1G01160 | OctamerElement:AtREG507 | OctamerElement:AtREG504 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG351 | OctamerElement:AtREG577 | REG | CCATGGGC | CATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTA | GGCCTTAG | 215.5 | 214.5 | 213.5 | 212.5 | 211.5 | 210.5 | TAIR9 | -1.0307 | -1.1283 | -0.9972 | -0.6796 | -0.4878 | -0.3494 | -0.446 | -0.468 | -0.4228 |
Gene:AT1G01160 | OctamerElement:AtREG563 | OctamerElement:AtREG360 | OctamerElement:AtREG358 | OctamerElement:AtREG356 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | CTTAGGCC | TTAGGCCC | TAGGCCCA | AGGCCCAA | GGCCCAAA | GCCCAAAT | 196.5 | 195.5 | 194.5 | 193.5 | 192.5 | 191.5 | TAIR9 | -1.0307 | -1.1283 | -0.9972 | -0.6796 | -0.4878 | -0.3494 | -0.446 | -0.468 | -0.4228 |
Gene:AT1G01160 | OctamerElement:AtREG446 | OctamerElement:AtREG484 | OctamerElement:AtREG420 | OctamerElement:AtREG373 | OctamerElement:AtREG421 | REG | ATTGGCCC | TTGGCCCA | TGGCCCAA | GGCCCAAA | GCCCAAAT | 168.5 | 167.5 | 166.5 | 165.5 | 164.5 | TAIR9 | -1.0307 | -1.1283 | -0.9972 | -0.6796 | -0.4878 | -0.3494 | -0.446 | -0.468 | -0.4228 |
Gene:AT1G01170 | OctamerElement:AtREG386 | REG | GCCCATTT | 63.5 | TAIR9 | 0.2181 | 0.8092 | 0.7376 | 0.2681 | 0.0958 | 0.3062 | 0.4117 | 0.3186 | 0.476 |
Gene:AT1G01180 | OctamerElement:AtREG470 | OctamerElement:AtREG557 | OctamerElement:AtREG632 | REG | AGACACGT | GACACGTA | AAAGTCAA | 164.5 | 163.5 | 156.5 | TAIR9 | -0.0818 | -0.1982 | -0.1022 | -0.0568 | 0.0374 | 0.0735 | -0.0847 | 0.0203 | -0.0126 |
Gene:AT1G01230 | OctamerElement:AtREG424 | REG | GGCCTATT | 101.5 | TAIR9 | 0.1994 | 0.5103 | 0.5858 | 0.7507 | 0.6769 | 0.6737 | 0.5926 | 0.6914 | 0.5931 |
Gene:AT1G01240 | OctamerElement:AtREG590 | OctamerElement:AtREG590 | REG | AACACGTG | CACGTGTT | 133.5 | 131.5 | TAIR9 | 0.0978 | 0.0099 | 0.1426 | 1.144 | 1.2216 | 1.0609 | 0.7249 | 0.6266 | 0.6267 |
Gene:AT1G01240 | OctamerElement:AtREG527 | OctamerElement:AtREG569 | OctamerElement:AtREG520 | REG | GTGTCGTT | TGTCGTTT | GTCGTTTT | 72.5 | 71.5 | 70.5 | TAIR9 | 0.0978 | 0.0099 | 0.1426 | 1.144 | 1.2216 | 1.0609 | 0.7249 | 0.6266 | 0.6267 |
Gene:AT1G01260 | OctamerElement:AtREG636 | REG | TAAGGGGT | 171.5 | TAIR9 | -0.1057 | -0.2278 | -0.4221 | -0.2484 | -0.2043 | -0.1877 | -0.1755 | -0.242 | -0.2849 |
Gene:AT1G01260 | OctamerElement:AtREG463 | OctamerElement:AtREG455 | OctamerElement:AtREG412 | OctamerElement:AtREG473 | REG | GACCCGGT | ACCCGGTT | CCGGTTTA | CGGTTTAA | 114.5 | 113.5 | 111.5 | 110.5 | TAIR9 | -0.1057 | -0.2278 | -0.4221 | -0.2484 | -0.2043 | -0.1877 | -0.1755 | -0.242 | -0.2849 |
Gene:AT1G01320 | OctamerElement:AtREG411 | REG | AGAGGCCC | 144.5 | TAIR9 | 0.4072 | 0.3616 | 0.3001 | -0.6009 | -0.6255 | -0.5331 | -0.9154 | -0.8901 | -0.8791 |
Gene:AT1G01320 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG358 | OctamerElement:AtREG360 | OctamerElement:AtREG563 | REG | CCCATTAA | GCCCATTA | GGCCCATT | AGGCCCAT | TAGGCCCA | TTAGGCCC | CTTAGGCC | 159.5 | 160.5 | 161.5 | 162.5 | 163.5 | 164.5 | 165.5 | TAIR9 | 0.4072 | 0.3616 | 0.3001 | -0.6009 | -0.6255 | -0.5331 | -0.9154 | -0.8901 | -0.8791 |
Gene:AT1G01370 | OctamerElement:AtREG642 | REG | AGGGGTAA | 224.5 | TAIR9 | -0.5053 | -0.5897 | -0.3262 | -1.5273 | -1.6794 | -1.5922 | -0.8979 | -0.7136 | -0.9452 |
Gene:AT1G01430 | OctamerElement:AtREG608 | REG | AAGCCACG | 199.5 | TAIR9 | 0.4069 | 0.5824 | 0.4955 | 1.4065 | 1.4021 | 1.5458 | 1.0772 | 1.0473 | 1.1668 |
Gene:AT1G01470 | OctamerElement:AtREG638 | REG | GACCGACT | 65.5 | TAIR9 | 2.1584 | 2.0208 | 1.9818 | 1.2722 | 1.1788 | 1.3207 | 2.5183 | 2.4409 | 2.5431 |
Gene:AT1G01470 | OctamerElement:AtREG588 | REG | TCACACGT | 108.5 | TAIR9 | 2.1584 | 2.0208 | 1.9818 | 1.2722 | 1.1788 | 1.3207 | 2.5183 | 2.4409 | 2.5431 |
Gene:AT1G01470 | OctamerElement:AtREG557 | OctamerElement:AtREG470 | REG | GACACGTA | AGACACGT | 151.5 | 152.5 | TAIR9 | 2.1584 | 2.0208 | 1.9818 | 1.2722 | 1.1788 | 1.3207 | 2.5183 | 2.4409 | 2.5431 |
Gene:AT1G01480 | OctamerElement:AtREG591 | REG | CCCATGGG | 74.5 | TAIR9 | -0.4804 | -0.5065 | -0.5035 | -0.6678 | -0.5624 | -0.529 | -0.6881 | -0.6146 | -0.6208 |
Gene:AT1G01490 | OctamerElement:AtREG395 | REG | TCACGCGC | 209.5 | TAIR9 | -0.0835 | 0.0254 | -0.0184 | 0.5 | 0.6303 | 0.5416 | 0.8457 | 0.8965 | 0.8559 |
Gene:AT1G01490 | OctamerElement:AtREG486 | REG | CACGCGCC | 222.5 | TAIR9 | -0.0835 | 0.0254 | -0.0184 | 0.5 | 0.6303 | 0.5416 | 0.8457 | 0.8965 | 0.8559 |
Gene:AT1G01500 | OctamerElement:AtREG426 | OctamerElement:AtREG378 | OctamerElement:AtREG372 | OctamerElement:AtREG386 | OctamerElement:AtREG443 | OctamerElement:AtREG610 | REG | TAAGCCCA | AAGCCCAT | AGCCCATT | GCCCATTT | CCCATTTA | TTTAACGG | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | 213.5 | TAIR9 | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
Gene:AT1G01500 | OctamerElement:AtREG437 | OctamerElement:AtREG458 | OctamerElement:AtREG384 | REG | ATGGCCCA | TGGCCCAG | GGCCCAGT | 191.5 | 190.5 | 189.5 | TAIR9 | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
Gene:AT1G01500 | OctamerElement:AtREG589 | REG | AAAAAGCC | 156.5 | TAIR9 | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
Gene:AT1G01500 | OctamerElement:AtREG588 | OctamerElement:AtREG460 | OctamerElement:AtREG541 | REG | TCACACGT | CACACGTG | CACGTGCG | 137.5 | 136.5 | 134.5 | TAIR9 | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
Gene:AT1G01500 | OctamerElement:AtREG567 | OctamerElement:AtREG602 | REG | AGGGTATT | GGGTATTT | 110.5 | 109.5 | TAIR9 | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
Gene:AT1G01500 | OctamerElement:AtREG592 | REG | TTTGACCC | 80.5 | TAIR9 | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
Gene:AT1G01500 | OctamerElement:AtREG646 | REG | CGTAATTA | 69.5 | TAIR9 | -0.2687 | -0.1572 | -0.1374 | -0.4421 | -0.3946 | -0.5282 | 0.1093 | -0.0073 | 0.0298 |
Gene:AT1G01510 | OctamerElement:AtREG540 | OctamerElement:AtREG537 | OctamerElement:AtREG439 | OctamerElement:AtREG415 | OctamerElement:AtREG565 | REG | ACGGCGTC | GGCGTCGT | GCGTCGTT | CGTCGTTT | GTCGTTTA | 208.5 | 206.5 | 205.5 | 204.5 | 203.5 | TAIR9 | 0.0815 | 0.0367 | 0.0576 | 0.1782 | 0.0838 | -0.0115 | 0.4776 | 0.3662 | 0.3958 |
Gene:AT1G01510 | OctamerElement:AtREG578 | REG | GATGACGT | 179.5 | TAIR9 | 0.0815 | 0.0367 | 0.0576 | 0.1782 | 0.0838 | -0.0115 | 0.4776 | 0.3662 | 0.3958 |
Gene:AT1G01510 | OctamerElement:AtREG529 | OctamerElement:AtREG373 | OctamerElement:AtREG392 | OctamerElement:AtREG400 | REG | TTTTGGGC | TTTGGGCC | TTGGGCCC | TGGGCCCT | 112.5 | 111.5 | 110.5 | 109.5 | TAIR9 | 0.0815 | 0.0367 | 0.0576 | 0.1782 | 0.0838 | -0.0115 | 0.4776 | 0.3662 | 0.3958 |
Gene:AT1G01540 | OctamerElement:AtREG630 | REG | CGACATCG | 155.5 | TAIR9 | 0.584 | 0.4525 | 0.72 | -0.2272 | -0.2105 | -0.1349 | 0.1254 | 0.0402 | 0.1091 |
Gene:AT1G01550 | OctamerElement:AtREG632 | REG | TTGACTTT | 194.5 | TAIR9 | -0.1782 | -0.2504 | -0.0628 | 0.6675 | 0.6154 | 0.6675 | 0.1696 | 0.2844 | 0.1946 |
Gene:AT1G01560 | OctamerElement:AtREG507 | REG | CCATGGGC | 203.5 | TAIR9 | 1.4287 | 1.4729 | 1.4138 | -0.5627 | -0.5717 | -0.2001 | -0.5257 | -0.4725 | -0.6527 |
Gene:AT1G01620 | OctamerElement:AtREG553 | OctamerElement:AtREG554 | REG | CAACGGTC | TCCAACGG | 444.5 | 446.5 | TAIR9 | 0.6155 | 0.643 | 0.6103 | 0.8442 | 0.8863 | 0.866 | 0.8756 | 0.8978 | 0.9163 |
Gene:AT1G01620 | OctamerElement:AtREG475 | REG | CTAGGCCC | 525.5 | TAIR9 | 0.6155 | 0.643 | 0.6103 | 0.8442 | 0.8863 | 0.866 | 0.8756 | 0.8978 | 0.9163 |
Gene:AT1G01630 | OctamerElement:AtREG440 | OctamerElement:AtREG419 | OctamerElement:AtREG485 | REG | CTGACGTG | TGACGTGG | TGGGCTCA | 208.5 | 207.5 | 202.5 | TAIR9 | 0.057 | -0.1043 | -0.147 | -0.2993 | -0.4364 | -0.218 | -1.1529 | -1.1701 | -1.1009 |
Gene:AT1G01630 | OctamerElement:AtREG531 | REG | AAAACGGC | 187.5 | TAIR9 | 0.057 | -0.1043 | -0.147 | -0.2993 | -0.4364 | -0.218 | -1.1529 | -1.1701 | -1.1009 |
Gene:AT1G01630 | OctamerElement:AtREG533 | OctamerElement:AtREG402 | OctamerElement:AtREG355 | OctamerElement:AtREG624 | REG | GAGCCCAA | AGCCCAAT | GCCCAATA | CCCAATAG | 104.5 | 103.5 | 102.5 | 101.5 | TAIR9 | 0.057 | -0.1043 | -0.147 | -0.2993 | -0.4364 | -0.218 | -1.1529 | -1.1701 | -1.1009 |
Gene:AT1G01630 | OctamerElement:AtREG425 | OctamerElement:AtREG351 | OctamerElement:AtREG353 | OctamerElement:AtREG356 | OctamerElement:AtREG352 | OctamerElement:AtREG355 | REG | ATAAGGCC | TAAGGCCC | AAGGCCCA | AGGCCCAA | GGCCCAAT | GCCCAATA | 87.5 | 86.5 | 85.5 | 84.5 | 83.5 | 82.5 | TAIR9 | 0.057 | -0.1043 | -0.147 | -0.2993 | -0.4364 | -0.218 | -1.1529 | -1.1701 | -1.1009 |
Gene:AT1G01650 | OctamerElement:AtREG564 | OctamerElement:AtREG626 | REG | GCGTTTTA | CAGCGTTT | 1082.5 | 1084.5 | TAIR9 | -0.429 | -0.4633 | -0.4582 | -0.0495 | 0.0161 | -9e-04 | 0.0951 | 0.1226 | 0.0166 |
Gene:AT1G01650 | OctamerElement:AtREG632 | REG | AAAGTCAA | 1095.5 | TAIR9 | -0.429 | -0.4633 | -0.4582 | -0.0495 | 0.0161 | -9e-04 | 0.0951 | 0.1226 | 0.0166 |
Gene:AT1G01650 | OctamerElement:AtREG486 | REG | CACGCGCC | 1129.5 | TAIR9 | -0.429 | -0.4633 | -0.4582 | -0.0495 | 0.0161 | -9e-04 | 0.0951 | 0.1226 | 0.0166 |
Gene:AT1G01650 | OctamerElement:AtREG536 | REG | ACACGCGT | 1139.5 | TAIR9 | -0.429 | -0.4633 | -0.4582 | -0.0495 | 0.0161 | -9e-04 | 0.0951 | 0.1226 | 0.0166 |
Gene:AT1G01650 | OctamerElement:AtREG449 | OctamerElement:AtREG420 | OctamerElement:AtREG484 | REG | GGCCCAAC | TGGCCCAA | TTGGCCCA | 182.5 | 183.5 | 184.5 | TAIR9 | -0.429 | -0.4633 | -0.4582 | -0.0495 | 0.0161 | -9e-04 | 0.0951 | 0.1226 | 0.0166 |
Gene:AT1G01670 | OctamerElement:AtREG428 | OctamerElement:AtREG478 | OctamerElement:AtREG481 | OctamerElement:AtREG517 | OctamerElement:AtREG466 | OctamerElement:AtREG489 | REG | CGTGTCGT | ACGTGTCG | GACGTGTC | TGACGTGT | GTGACGTG | CGTGACGT | 62.5 | 63.5 | 64.5 | 65.5 | 66.5 | 67.5 | TAIR9 | 0.1649 | -0.0471 | 0.0984 | 0.1499 | 0.1718 | 0.1424 | 0.0555 | 0.3222 | 0.0715 |
Gene:AT1G01690 | OctamerElement:AtREG417 | REG | TTATTGGG | 188.5 | TAIR9 | -0.1248 | -0.2664 | -0.4168 | -0.1912 | 0 | -0.2122 | -0.0638 | -0.1503 | -0.2459 |
Gene:AT1G01690 | OctamerElement:AtREG364 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | TATGGGCC | ATGGGCCA | TGGGCCAT | 169.5 | 168.5 | 167.5 | TAIR9 | -0.1248 | -0.2664 | -0.4168 | -0.1912 | 0 | -0.2122 | -0.0638 | -0.1503 | -0.2459 |
Gene:AT1G01690 | OctamerElement:AtREG558 | OctamerElement:AtREG357 | OctamerElement:AtREG372 | OctamerElement:AtREG378 | OctamerElement:AtREG376 | OctamerElement:AtREG365 | OctamerElement:AtREG601 | OctamerElement:AtREG394 | OctamerElement:AtREG364 | OctamerElement:AtREG354 | OctamerElement:AtREG447 | OctamerElement:AtREG411 | REG | CTAATGGG | TAATGGGC | AATGGGCT | ATGGGCTT | TGGGCTTT | GGGCTTTA | GGCTTTAT | TTATGGGC | TATGGGCC | ATGGGCCT | TGGGCCTC | GGGCCTCT | 149.5 | 148.5 | 147.5 | 146.5 | 145.5 | 144.5 | 143.5 | 139.5 | 138.5 | 137.5 | 136.5 | 135.5 | TAIR9 | -0.1248 | -0.2664 | -0.4168 | -0.1912 | 0 | -0.2122 | -0.0638 | -0.1503 | -0.2459 |
Gene:AT1G01710 | OctamerElement:AtREG504 | OctamerElement:AtREG490 | OctamerElement:AtREG437 | REG | CATGGGCC | ATGGGCCA | TGGGCCAT | 277.5 | 276.5 | 275.5 | TAIR9 | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
Gene:AT1G01710 | OctamerElement:AtREG416 | OctamerElement:AtREG416 | OctamerElement:AtREG545 | REG | TTAAGGCC | GGCCTTAA | TTAAAGCC | 239.5 | 235.5 | 231.5 | TAIR9 | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
Gene:AT1G01710 | OctamerElement:AtREG396 | OctamerElement:AtREG357 | OctamerElement:AtREG361 | OctamerElement:AtREG354 | OctamerElement:AtREG353 | OctamerElement:AtREG398 | REG | TTAATGGG | TAATGGGC | AATGGGCC | ATGGGCCT | TGGGCCTT | GGGCCTTG | 222.5 | 221.5 | 220.5 | 219.5 | 218.5 | 217.5 | TAIR9 | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
Gene:AT1G01710 | OctamerElement:AtREG590 | OctamerElement:AtREG628 | REG | AACACGTG | ACACGTGA | 93.5 | 92.5 | TAIR9 | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
Gene:AT1G01710 | OctamerElement:AtREG575 | REG | CGAACCGA | 71.5 | TAIR9 | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
Gene:AT1G01710 | OctamerElement:AtREG513 | REG | GTCCACGT | 63.5 | TAIR9 | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
Gene:AT1G01710 | OctamerElement:AtREG598 | OctamerElement:AtREG412 | OctamerElement:AtREG521 | REG | ATAAACCG | TAAACCGG | AAACCGGA | 47.5 | 46.5 | 45.5 | TAIR9 | -0.1457 | -0.0511 | -0.2278 | 0.2035 | -0.0105 | 0.1167 | 0.0745 | 0.158 | 0.063 |
Gene:AT1G01720 | OctamerElement:AtREG644 | REG | ACCGGAAA | 280.5 | TAIR9 | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |
Gene:AT1G01720 | OctamerElement:AtREG451 | REG | GGTTCGGT | 242.5 | TAIR9 | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |
Gene:AT1G01720 | OctamerElement:AtREG576 | OctamerElement:AtREG569 | REG | GAAACGAC | AAACGACA | 183.5 | 182.5 | TAIR9 | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |
Gene:AT1G01720 | OctamerElement:AtREG471 | OctamerElement:AtREG371 | OctamerElement:AtREG388 | OctamerElement:AtREG419 | OctamerElement:AtREG440 | OctamerElement:AtREG515 | REG | TCGCCACG | CGCCACGT | GCCACGTC | CCACGTCA | CACGTCAG | ACGTCAGC | 146.5 | 145.5 | 144.5 | 143.5 | 142.5 | 141.5 | TAIR9 | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |
Gene:AT1G01720 | OctamerElement:AtREG472 | REG | ACGTGTCC | 113.5 | TAIR9 | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |
Gene:AT1G01720 | OctamerElement:AtREG464 | OctamerElement:AtREG382 | OctamerElement:AtREG460 | REG | CCCACGTG | CCACGTGT | CACGTGTG | 90.5 | 89.5 | 88.5 | TAIR9 | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |
Gene:AT1G01720 | OctamerElement:AtREG478 | OctamerElement:AtREG366 | OctamerElement:AtREG366 | OctamerElement:AtREG472 | REG | CGACACGT | GACACGTG | CACGTGTC | ACGTGTCC | 50.5 | 49.5 | 47.5 | 46.5 | TAIR9 | -1.8479 | -1.6808 | -1.5437 | 0.0924 | -0.0048 | 0.0683 | -1.4005 | -1.2546 | -1.278 |