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Systematic microarray analysis (Gene Atlas) of mouse GPCR expressions in various cell types including macrophage and other tissues, combined with clock-controlled elements by computational prediction (PEDB). We selected probe set with highest mean intensity across all the samples in the dataset as a gene representative from Gene Atlas, then sorted the cell panel sample types into cell type (Lymphocytes, Myeloid leukocytes, ..., Derived cells) and into organ types (Brain & Neural tissues, Eye, .... Reproductive organs). The motifs range from -100000 to +100000 relative to the TSS, we focused on the motifs of from -10000 to -1.
References (for PEDB)
http://www.ncbi.nlm.nih.gov/pubmed/18815372
References (for Gene Atlas)
http://www.ncbi.nlm.nih.gov/pubmed/18442421
| PEDB_GeneAtlas_Fibroblast | This collection of Gene Expression Properties are associated with Fibroblasts. |
| PEDB_GeneAtlas_White_Brown_adipose | This collection of Gene Expression Properties are associated with White and Brown adiposes. |
| PEDB_GeneAtlas_Respiration_organ | This collection of Gene Expression Properties are associated with Raspiration organ. |
| PEDB_GeneAtlas_Reproductive_organ | This collection of Gene Expression Properties are associated with Reproductive organs, that is, Female specific organs (placenta, uterus, ovary, umbilical_cord) & Male-specific organs (bladder, prostate, testis) . |
| PEDB_GeneAtlas_Epidermis | This collection of Gene Expression Properties are associated with Epidermis. |
| PEDB_GeneAtlas_Digestive_system_organ | This collection of Gene Expression Properties are associated with Digestive system organs. |
| PEDB_GeneAtlas_Gland | This collection of Gene Expression Properties are associated with Glands such as salivary gland and lacrimal gland. |
| PEDB_GeneAtlas_Trunk_Abdomen_organ | This collection of Gene Expression Properties are associated with Trunk organ (pancreas) & Abdomen organ (liver, kidney). |
| PEDB_GeneAtlas_Endocrine_gland | This collection of Gene Expression Properties are associated with Endocrine glands. |
| PEDB_GeneAtlas_Heart_Muscle | This collection of Gene Expression Properties are associated with Heart & Muscles. |
| PEDB_GeneAtlas_Stem_cells_Progenitors | This collection of Gene Expression Properties are associated with Stem cells & Progenitors. |
| PEDB_GeneAtlas_Lymphocytes | This collection of Gene Expression Properties are associated with Lymphocytes, that is, T-cells, Natural Killer cells, B-cells. |
| PEDB_GeneAtlas_Dendritic_cells | This collection of Gene Expression Properties are associated with Dendritic cells. |
| PEDB_GeneAtlas_Myeloid_leukocytes | This collection of Gene Expression Properties are associated with Myeloid leukocytes, that is, mast cell, macrophage, granulocyte, microglia. |
| PEDB_GeneAtlas_Osteoblasts_Osteoclasts | This collection of Gene Expression Properties are associated with Osteoblast & Osteoclast. |
| PEDB_GeneAtlas_Spleen_Lymph_node | This collection of Gene Expression Properties are associated with Spleen & Lymph node. |
| PEDB_GeneAtlas_Derived_cells | This collection of Gene Expression Properties are associated with artificially derived cells. |
| PEDB_GeneAtlas_Eye | This collection of Gene Expression Properties are associated with Eye. |
| PEDB_GeneAtlas_Brain_Neural_tissues | This collection of Gene Expression Properties are associated with Brain & Neural tissues. |
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| PEDB_GeneAtlas_Brain_Neural_tissues | ||||
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2013.10.18
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2013.10.18
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| PEDB_GeneAtlas_Dendritic_cells | ||||
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2013.10.18
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211.9KB
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2013.10.18
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324.5KB
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2013.10.18
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892.9KB
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| PEDB_GeneAtlas_Derived_cells | ||||
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2013.10.18
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245.4KB
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2013.10.18
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405.5KB
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2013.10.18
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1.1MB
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| PEDB_GeneAtlas_Digestive_system_organ | ||||
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2013.10.18
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212.0KB
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2013.10.18
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325.0KB
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2013.10.18
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857.2KB
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| PEDB_GeneAtlas_Endocrine_gland | ||||
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2013.10.18
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205.4KB
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2013.10.18
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308.5KB
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2013.10.18
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791.7KB
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| PEDB_GeneAtlas_Epidermis | ||||
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2013.10.18
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198.6KB
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2013.10.18
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291.5KB
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2013.10.18
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727.4KB
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| PEDB_GeneAtlas_Eye | ||||
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2013.10.18
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239.1KB
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2013.10.18
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393.0KB
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2013.10.18
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1.1MB
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| PEDB_GeneAtlas_Fibroblast | ||||
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2013.10.18
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198.6KB
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2013.10.18
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291.0KB
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2013.10.18
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| PEDB_GeneAtlas_Gland | ||||
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2013.10.18
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205.3KB
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2013.10.18
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308.5KB
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2013.10.18
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795.6KB
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| PEDB_GeneAtlas_Heart_Muscle | ||||
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2013.10.18
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205.3KB
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2013.10.18
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308.0KB
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2013.10.18
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790.3KB
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| PEDB_GeneAtlas_Lymphocytes | ||||
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2013.10.18
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284.5KB
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2013.10.18
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498.5KB
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2013.10.18
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1.6MB
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| PEDB_GeneAtlas_Myeloid_leukocytes | ||||
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Table Data
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2013.10.18
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278.5KB
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2013.10.18
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486.0KB
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1.6MB
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| PEDB_GeneAtlas_Osteoblasts_Osteoclasts | ||||
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Table Data
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2013.10.18
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218.8KB
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2013.10.18
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341.0KB
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2013.10.18
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926.8KB
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| PEDB_GeneAtlas_Reproductive_organ | ||||
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Table Data
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2013.10.18
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239.2KB
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2013.10.18
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392.0KB
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2013.10.18
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1.1MB
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| PEDB_GeneAtlas_Respiration_organ | ||||
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Table Data
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2013.10.18
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198.6KB
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2013.10.18
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291.5KB
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2013.10.18
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724.1KB
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| PEDB_GeneAtlas_Spleen_Lymph_node | ||||
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Table Data
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2013.10.18
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218.6KB
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2013.10.18
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341.0KB
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2013.10.18
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909.3KB
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| PEDB_GeneAtlas_Stem_cells_Progenitors | ||||
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Table Data
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2013.10.18
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231.8KB
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2013.10.18
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372.5KB
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RDF (Turtle)
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2013.10.18
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1.1MB
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| PEDB_GeneAtlas_Trunk_Abdomen_organ | ||||
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Table Data
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2013.10.18
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211.8KB
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Table Data
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2013.10.18
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325.5KB
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RDF (Turtle)
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2013.10.18
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845.0KB
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| PEDB_GeneAtlas_White_Brown_adipose | ||||
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Table Data
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2013.10.18
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218.9KB
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2013.10.18
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341.5KB
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2013.10.18
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935.5KB
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| Contributor | ||
|---|---|---|
| Collaborators | ||
| Website | ||
| Reference | ||
| Total downloads | 1985 | |
| Created date | Oct 18, 2013 | |
| Last update date | Oct 31, 2013 |
|
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